FFCP PHASE1:Mm9::chr19:4037944..4037959,-: Difference between revisions
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{{FFCP|EntrezGene=14870|HGNC=|UniProt=F8WJD9|association_with_transcript=-23bp_to_ENSMUST00000042898_5end|description=CAGE_peak_2_at_Gstp1_5end|id=chr19:4037944..4037959,-|ontology_enrichment_celltype=CL:0000055!3.22e-17!50;CL:0000221!5.39e-16!44;CL:0000133!5.39e-16!44;CL:0002319!1.17e-15!43;CL:0000393!8.56e-14!39;CL:0000211!8.56e-14!39;CL:0002321!3.91e-12!70;CL:0000220!3.91e-12!70;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0000117!1.80e-11!23;CL:0000337!1.80e-11!23|ontology_enrichment_celltype_v019_2=CL:0000221,5.39e-16,44;CL:0000133,5.39e-16,44;CL:0002319,1.17e-15,43;CL:0000393,8.56e-14,39;CL:0000211,8.56e-14,39;CL:0002321,3.91e-12,70;CL:0000540,7.02e-12,33;CL:0000047,7.02e-12,33;CL:0000031,7.02e-12,33;CL:0000404,7.02e-12,33;CL:0000117,1.80e-11,23;CL:0000337,1.80e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.54e-12!73;UBERON:0005743!2.54e-12!73;UBERON:0000073!1.08e-11!75;UBERON:0001016!1.08e-11!75;UBERON:0004535!3.99e-09!23;UBERON:0001009!3.99e-09!23;UBERON:0004111!5.05e-09!122;UBERON:0004121!7.17e-08!102;UBERON:0000924!7.17e-08!102;UBERON:0006601!7.17e-08!102;UBERON:0007100!1.13e-07!18;UBERON:0000948!1.13e-07!18;UBERON:0005498!1.13e-07!18;UBERON:0004140!1.13e-07!18;UBERON:0009881!1.13e-07!18;UBERON:0004141!1.13e-07!18;UBERON:0003084!1.13e-07!18;UBERON:0007005!1.13e-07!18;UBERON:0004139!1.13e-07!18;UBERON:0004291!1.13e-07!18;UBERON:0000025!1.86e-07!114;UBERON:0003103!3.81e-07!43;UBERON:0001049!7.27e-07!52;UBERON:0005068!7.27e-07!52;UBERON:0006241!7.27e-07!52;UBERON:0007135!7.27e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.54e-12,73;UBERON:0001016,1.08e-11,75;UBERON:0010314,9.87e-11,92;UBERON:0004535,3.99e-09,23;UBERON:0001009,3.99e-09,23;UBERON:0004111,5.05e-09,122;UBERON:0004121,3.75e-08,95;UBERON:0000924,3.75e-08,95;UBERON:0006601,3.75e-08,95;UBERON:0007100,1.13e-07,18;UBERON:0000948,1.13e-07,18;UBERON:0005498,1.13e-07,18;UBERON:0004140,1.13e-07,18;UBERON:0009881,1.13e-07,18;UBERON:0004141,1.13e-07,18;UBERON:0003084,1.13e-07,18;UBERON:0007005,1.13e-07,18;UBERON:0004139,1.13e-07,18;UBERON:0004291,1.13e-07,18;UBERON:0000025,1.86e-07,114;UBERON:0000073,2.23e-07,54;UBERON:0003103,3.81e-07,43;UBERON:0001049,7.27e-07,52;UBERON:0005068,7.27e-07,52;UBERON:0006241,7.27e-07,52;UBERON:0007135,7.27e-07,52|phase1_expression=42.75974217698,24.0793031271159,19.1099680543605,21.1724947914781,20.5367249278002,35.9261641891444,29.2015800744407,42.2233267653954,10.13678799492,11.7032263160997,4.79410311031414,4.46724090373884,29.7889270080298,38.1152954546829,24.3170126125434,19.2351504020335,39.1754651751762,17.8236123427404,18.2362196695633,18.6731446791133,24.407424273357,19.7588992889762,18.8063848180033,35.1983330145495,43.128944840628,43.0673973086265,36.6147696735214,39.6467068142036,61.3775644844088,51.4141464710259,49.445903876133,24.7661962649256,30.1381745916439,31.6963362030877,53.7264012737371,67.9899699516234,59.209113316087,17.1597968602132,35.160090503571,17.7998072951091,13.5293242247133,19.8083190637949,15.5363312969969,63.3260994417154,66.6046438112211,38.9119114582765,171.343704412221,80.2332575480043,62.6105620793245,101.68683721585,66.3535638504218,89.1265899062824,18.456086666351,29.0144856804538,21.1739093459752,56.5970759279083,50.4298854292212,36.6127185516984,60.4926217970197,76.7036919944448,58.9463205260747,82.3392212927991,104.936785941114,30.1466405289269,36.5880554149781,31.2611250576284,77.5964286242668,107.965343795357,54.6444256865677,76.4133610957369,57.2083894875759,58.8441027871835,61.4014543845486,54.6308964498695,55.1111458354859,65.2645338493115,63.8672109796454,31.6664598451266,73.2703163632281,69.1084147706216,80.6006140137229,59.3841242434706,56.1157827992776,75.4101897442451,67.8424220129037,48.0244594322078,51.6809201300744,57.038230422542,18.1742863999642,34.6117745289078,34.204009666798,27.5335640634044,33.9985666853875,22.6675340487883,20.1430689408777,18.3691023709908,56.8799901533595,92.0323741921512,75.5977273394348,75.9680085197231,49.0135100822848,32.0816193535795,12.7402619853323,7.11066703153331,32.2571651106709,30.1498239915367,41.4530044912122,32.314037960494,21.7507822263624,36.3683240708821,26.1962843416865,36.5358573974569,29.2881681515194,30.5966960321824,27.6333461768906,31.2909812410892,15.0788930317968,68.2508964661983,48.6535803572431,28.470965590744,35.334642953663,23.2740121504907,50.325775528893,37.475942017478,31.8358994356452,53.135067483387,18.9307896719354,29.395233818677,19.1876042880328,44.0384479850179,39.8025524452205,41.4659361972453,41.8916611663386,27.105838477015,48.4146143823775,31.3125637720772,30.5518091550949,32.4702193292343,53.8299475463727,30.7245109594252,27.0650521362424,28.5078609497506,32.2311212351575,18.2352829581215,18.3018182717072,17.8078071195941,22.2073087206557,22.5071932542944,36.6465587985832,24.9620025821521,22.8736461413134,33.7561427938465,16.9608822027615,20.5468778248078,16.4625709126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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14870 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WJD9 | |||
|association_with_transcript=-23bp_to_ENSMUST00000042898_5end | |||
|cluster_id=chr19:4037944..4037959,- | |||
|description=CAGE_peak_2_at_Gstp1_5end | |||
|id=chr19:4037944..4037959,- | |||
|ontology_enrichment_celltype=CL:0000055!3.22e-17!50;CL:0000221!5.39e-16!44;CL:0000133!5.39e-16!44;CL:0002319!1.17e-15!43;CL:0000393!8.56e-14!39;CL:0000211!8.56e-14!39;CL:0002321!3.91e-12!70;CL:0000220!3.91e-12!70;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0000117!1.80e-11!23;CL:0000337!1.80e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.39e-16,44;CL:0000133,5.39e-16,44;CL:0002319,1.17e-15,43;CL:0000393,8.56e-14,39;CL:0000211,8.56e-14,39;CL:0002321,3.91e-12,70;CL:0000540,7.02e-12,33;CL:0000047,7.02e-12,33;CL:0000031,7.02e-12,33;CL:0000404,7.02e-12,33;CL:0000117,1.80e-11,23;CL:0000337,1.80e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.54e-12!73;UBERON:0005743!2.54e-12!73;UBERON:0000073!1.08e-11!75;UBERON:0001016!1.08e-11!75;UBERON:0004535!3.99e-09!23;UBERON:0001009!3.99e-09!23;UBERON:0004111!5.05e-09!122;UBERON:0004121!7.17e-08!102;UBERON:0000924!7.17e-08!102;UBERON:0006601!7.17e-08!102;UBERON:0007100!1.13e-07!18;UBERON:0000948!1.13e-07!18;UBERON:0005498!1.13e-07!18;UBERON:0004140!1.13e-07!18;UBERON:0009881!1.13e-07!18;UBERON:0004141!1.13e-07!18;UBERON:0003084!1.13e-07!18;UBERON:0007005!1.13e-07!18;UBERON:0004139!1.13e-07!18;UBERON:0004291!1.13e-07!18;UBERON:0000025!1.86e-07!114;UBERON:0003103!3.81e-07!43;UBERON:0001049!7.27e-07!52;UBERON:0005068!7.27e-07!52;UBERON:0006241!7.27e-07!52;UBERON:0007135!7.27e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.54e-12,73;UBERON:0001016,1.08e-11,75;UBERON:0010314,9.87e-11,92;UBERON:0004535,3.99e-09,23;UBERON:0001009,3.99e-09,23;UBERON:0004111,5.05e-09,122;UBERON:0004121,3.75e-08,95;UBERON:0000924,3.75e-08,95;UBERON:0006601,3.75e-08,95;UBERON:0007100,1.13e-07,18;UBERON:0000948,1.13e-07,18;UBERON:0005498,1.13e-07,18;UBERON:0004140,1.13e-07,18;UBERON:0009881,1.13e-07,18;UBERON:0004141,1.13e-07,18;UBERON:0003084,1.13e-07,18;UBERON:0007005,1.13e-07,18;UBERON:0004139,1.13e-07,18;UBERON:0004291,1.13e-07,18;UBERON:0000025,1.86e-07,114;UBERON:0000073,2.23e-07,54;UBERON:0003103,3.81e-07,43;UBERON:0001049,7.27e-07,52;UBERON:0005068,7.27e-07,52;UBERON:0006241,7.27e-07,52;UBERON:0007135,7.27e-07,52 | |||
|phase1_expression=42.75974217698,24.0793031271159,19.1099680543605,21.1724947914781,20.5367249278002,35.9261641891444,29.2015800744407,42.2233267653954,10.13678799492,11.7032263160997,4.79410311031414,4.46724090373884,29.7889270080298,38.1152954546829,24.3170126125434,19.2351504020335,39.1754651751762,17.8236123427404,18.2362196695633,18.6731446791133,24.407424273357,19.7588992889762,18.8063848180033,35.1983330145495,43.128944840628,43.0673973086265,36.6147696735214,39.6467068142036,61.3775644844088,51.4141464710259,49.445903876133,24.7661962649256,30.1381745916439,31.6963362030877,53.7264012737371,67.9899699516234,59.209113316087,17.1597968602132,35.160090503571,17.7998072951091,13.5293242247133,19.8083190637949,15.5363312969969,63.3260994417154,66.6046438112211,38.9119114582765,171.343704412221,80.2332575480043,62.6105620793245,101.68683721585,66.3535638504218,89.1265899062824,18.456086666351,29.0144856804538,21.1739093459752,56.5970759279083,50.4298854292212,36.6127185516984,60.4926217970197,76.7036919944448,58.9463205260747,82.3392212927991,104.936785941114,30.1466405289269,36.5880554149781,31.2611250576284,77.5964286242668,107.965343795357,54.6444256865677,76.4133610957369,57.2083894875759,58.8441027871835,61.4014543845486,54.6308964498695,55.1111458354859,65.2645338493115,63.8672109796454,31.6664598451266,73.2703163632281,69.1084147706216,80.6006140137229,59.3841242434706,56.1157827992776,75.4101897442451,67.8424220129037,48.0244594322078,51.6809201300744,57.038230422542,18.1742863999642,34.6117745289078,34.204009666798,27.5335640634044,33.9985666853875,22.6675340487883,20.1430689408777,18.3691023709908,56.8799901533595,92.0323741921512,75.5977273394348,75.9680085197231,49.0135100822848,32.0816193535795,12.7402619853323,7.11066703153331,32.2571651106709,30.1498239915367,41.4530044912122,32.314037960494,21.7507822263624,36.3683240708821,26.1962843416865,36.5358573974569,29.2881681515194,30.5966960321824,27.6333461768906,31.2909812410892,15.0788930317968,68.2508964661983,48.6535803572431,28.470965590744,35.334642953663,23.2740121504907,50.325775528893,37.475942017478,31.8358994356452,53.135067483387,18.9307896719354,29.395233818677,19.1876042880328,44.0384479850179,39.8025524452205,41.4659361972453,41.8916611663386,27.105838477015,48.4146143823775,31.3125637720772,30.5518091550949,32.4702193292343,53.8299475463727,30.7245109594252,27.0650521362424,28.5078609497506,32.2311212351575,18.2352829581215,18.3018182717072,17.8078071195941,22.2073087206557,22.5071932542944,36.6465587985832,24.9620025821521,22.8736461413134,33.7561427938465,16.9608822027615,20.5468778248078,16.4625709126355,24.8792833523116,19.6619692447706,21.3598762905214,23.5855704498342,47.8460534557009,43.3873210965028,39.9737776443453,54.4512891845984,48.6007652416087,46.2801338662135,51.855069679341,60.6297887163139,52.6611694075934,47.7223564749093,65.1744832394008,67.1249743039685,91.6673921156834,72.2319879307557,73.6793238994441,46.4740786326721,40.6473218898173,30.7289468174932,31.7340679996253,29.6470668243975,29.9585306699966,36.9849613994408,44.3703754171354,36.2476211467139,38.4255764747369,49.8255514621737,38.0454585412465,32.1709067264345,42.3777285447651,34.3136793329651,44.0421510240569,40.2016772766931,46.5990579415219,57.2797060878307,21.9357144210679,29.3040112750009,27.0856266034268,22.6924409986122,17.6742266123603,16.4414996523069,24.7985048605732,29.2017633784957,36.0319718651658,29.3488100816277,27.3625973374394,35.1840601252633,31.9304199586492,29.0089973585559,30.1471449690521,23.9348300674535,25.6049562331221,24.1581487894803,19.4938603363538,14.3768206527355,27.9105710751378,21.8426371180192,21.2166257475574,23.3216637578486,27.4992807177119,52.6546591974823,33.7294712951463,31.9411353826371,23.2550767512008,25.1118565668697,23.4508760418542,26.6608877792335,14.8301572371927,22.2265553189729,28.3474802750432,22.4831223807057,30.9701664812745,32.8101465545202,32.6906872394216,7.53956419696361,10.8781136763742,36.3905562034087,41.3905119457099,53.3027958759469,35.163505977661,40.6558664534155,119.166277640464,47.3262329124385,43.3387006169269,36.6219776145758,32.021818925642,38.7669692903366,32.2707245099269,44.5291771842384,40.9158201075837,33.204173347508,38.237236654195,35.7689014724837,35.2569895261165,26.8763482933401,44.2119929566395,41.1509928853885,34.9604116063173,34.1625619370169,36.966595632156,74.120775113074,46.1152721915891,25.3259727304857,32.354501923498,53.8311041360929,47.7215504483082,34.7881408297496,40.2228618667929,40.8527526904546,22.3275756598825,26.7772475430302,28.7211626942334,24.4729522426338,24.7932656466878,21.8850197400821,35.9268639955227,20.1817668934791,13.7690846061483,41.2388104362779,41.8811082471359,28.0948102450876,19.1191972022254,23.2776070806116,19.2044852701722,39.0584321084,44.5020724825223,29.9024041396242,23.5281029478074,18.7046472643409,19.7786879854926,26.6553744055999,22.6490391474457,19.5475194492934,20.2929605869304,21.4209959396857,67.7816138790731,37.011311248992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| |||
|short_description=p2@Gstp1 | |||
}} |
Revision as of 01:27, 4 August 2015
Short description: | p2@Gstp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gstp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENSMUST00000042898_5end |
EntrezGene: | 14870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.39e-16 | 44 |
neurectodermal cell | 5.39e-16 | 44 |
neural cell | 1.17e-15 | 43 |
electrically responsive cell | 8.56e-14 | 39 |
electrically active cell | 8.56e-14 | 39 |
embryonic cell | 3.91e-12 | 70 |
neuron | 7.02e-12 | 33 |
neuronal stem cell | 7.02e-12 | 33 |
neuroblast | 7.02e-12 | 33 |
electrically signaling cell | 7.02e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.80e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.80e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.54e-12 | 73 |
nervous system | 1.08e-11 | 75 |
structure with developmental contribution from neural crest | 9.87e-11 | 92 |
cardiovascular system | 3.99e-09 | 23 |
circulatory system | 3.99e-09 | 23 |
anatomical conduit | 5.05e-09 | 122 |
ectoderm-derived structure | 3.75e-08 | 95 |
ectoderm | 3.75e-08 | 95 |
presumptive ectoderm | 3.75e-08 | 95 |
primary circulatory organ | 1.13e-07 | 18 |
heart | 1.13e-07 | 18 |
primitive heart tube | 1.13e-07 | 18 |
primary heart field | 1.13e-07 | 18 |
anterior lateral plate mesoderm | 1.13e-07 | 18 |
heart tube | 1.13e-07 | 18 |
heart primordium | 1.13e-07 | 18 |
cardiac mesoderm | 1.13e-07 | 18 |
cardiogenic plate | 1.13e-07 | 18 |
heart rudiment | 1.13e-07 | 18 |
tube | 1.86e-07 | 114 |
regional part of nervous system | 2.23e-07 | 54 |
compound organ | 3.81e-07 | 43 |
neural tube | 7.27e-07 | 52 |
neural rod | 7.27e-07 | 52 |
future spinal cord | 7.27e-07 | 52 |
neural keel | 7.27e-07 | 52 |