FFCP PHASE1:Hg19::chr6:144416730..144416733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21083 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWJ5 | |||
|association_with_transcript=20bp_to_ENST00000367569,NM_031287,uc003qkr.1_5end | |||
|description=CAGE_peak_3_at_SF3B5_5end | |||
|id=chr6:144416730..144416733,- | |||
|ontology_enrichment_celltype=CL:0000222!2.76e-18!119;CL:0000055!5.21e-18!180;CL:0000183!6.19e-18!59;CL:0000393!1.10e-15!60;CL:0000211!1.10e-15!60;CL:0000187!1.95e-15!54;CL:0000680!9.78e-15!57;CL:0000056!9.78e-15!57;CL:0000355!9.78e-15!57;CL:0002371!1.44e-14!591;CL:0000192!1.38e-12!42;CL:0000514!1.38e-12!42;CL:0000144!2.99e-12!625;CL:0000359!1.53e-10!32;CL:0000220!9.69e-10!246;CL:0002321!3.72e-09!248;CL:0002078!8.91e-09!44;CL:0000115!1.72e-08!35;CL:0000048!3.70e-08!430;CL:0000723!6.06e-08!436;CL:0000548!8.84e-08!679;CL:0000004!8.84e-08!679;CL:0000255!8.84e-08!679;CL:0000012!1.59e-07!682;CL:0000034!6.58e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.03e-10;32!CL:0000192;1.35e-09;43!CL:0000187;1.36e-09;55!CL:0000393;2.40e-09;61!CL:0000211;2.40e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.19e-19,121;CL:0000393,1.07e-15,61;CL:0000211,1.07e-15,61;CL:0000187,1.19e-15,55;CL:0000680,8.11e-15,58;CL:0000056,8.11e-15,58;CL:0000355,8.11e-15,58;CL:0000192,1.09e-12,43;CL:0000514,1.09e-12,43;CL:0000359,1.23e-10,32;CL:0002321,8.64e-10,250;CL:0002078,2.57e-09,45;CL:0000115,4.30e-09,36;CL:0000048,4.66e-09,427;CL:0000723,9.12e-09,433;CL:0000034,9.03e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.35e-09;43!CL:0000355;1.68e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.76e-16!79;UBERON:0007798!2.76e-16!79;UBERON:0004290!1.10e-15!70;UBERON:0000914!2.21e-15!83;UBERON:0002329!2.21e-15!83;UBERON:0003077!2.21e-15!83;UBERON:0003059!2.21e-15!83;UBERON:0007282!2.21e-15!83;UBERON:0009618!2.21e-15!83;UBERON:0007285!2.21e-15!83;UBERON:0001134!3.70e-14!61;UBERON:0002036!3.70e-14!61;UBERON:0003082!3.70e-14!61;UBERON:0000055!9.03e-14!69;UBERON:0004872!1.27e-13!84;UBERON:0004535!2.45e-13!110;UBERON:0000486!3.63e-13!82;UBERON:0001009!4.81e-13!113;UBERON:0002385!1.03e-12!63;UBERON:0001015!1.03e-12!63;UBERON:0000383!1.03e-12!63;UBERON:0001981!1.11e-12!60;UBERON:0007500!1.11e-12!60;UBERON:0004537!1.11e-12!60;UBERON:0006965!1.11e-12!60;UBERON:0005256!1.02e-11!143;UBERON:0003914!1.33e-11!118;UBERON:0001637!2.95e-11!42;UBERON:0003509!2.95e-11!42;UBERON:0004572!2.95e-11!42;UBERON:0000490!1.67e-09!138;UBERON:0004573!2.81e-08!33;UBERON:0004571!2.81e-08!33;UBERON:0002100!2.37e-07!216;UBERON:0006914!8.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.33e-08;42!UBERON:0003509;1.33e-08;42!UBERON:0004572;1.33e-08;42!UBERON:0007500;1.68e-08;56!UBERON:0001981;1.68e-08;56!UBERON:0004537;1.68e-08;56!UBERON:0004573;1.19e-07;33!UBERON:0004571;1.19e-07;33!UBERON:0003914;1.67e-07;74!UBERON:0002049;2.64e-07;75!UBERON:0007798;2.64e-07;75!UBERON:0000055;3.28e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.94e-19,78;UBERON:0002049,2.83e-16,78;UBERON:0007798,2.83e-16,78;UBERON:0002329,4.71e-16,71;UBERON:0003059,4.71e-16,71;UBERON:0007282,4.71e-16,71;UBERON:0004290,4.71e-16,71;UBERON:0009618,4.71e-16,71;UBERON:0007524,8.59e-16,73;UBERON:0003077,2.28e-15,72;UBERON:0007285,2.28e-15,72;UBERON:0001134,1.82e-14,62;UBERON:0002036,1.82e-14,62;UBERON:0003082,1.82e-14,62;UBERON:0000055,1.11e-13,68;UBERON:0004872,1.73e-13,83;UBERON:0000486,2.47e-13,83;UBERON:0002385,4.09e-13,64;UBERON:0001015,4.09e-13,64;UBERON:0000383,4.09e-13,64;UBERON:0004535,7.79e-13,109;UBERON:0007500,9.45e-13,59;UBERON:0001981,9.45e-13,59;UBERON:0004537,9.45e-13,59;UBERON:0006965,9.45e-13,59;UBERON:0001009,2.28e-12,112;UBERON:0003914,1.77e-11,117;UBERON:0001637,2.39e-11,42;UBERON:0003509,2.39e-11,42;UBERON:0004572,2.39e-11,42;UBERON:0000490,4.04e-11,148;UBERON:0003104,2.20e-10,160;UBERON:0009142,2.20e-10,160;UBERON:0005256,4.08e-10,122;UBERON:0000926,1.57e-08,315;UBERON:0004120,1.57e-08,315;UBERON:0006603,1.57e-08,315;UBERON:0004573,2.83e-08,33;UBERON:0004571,2.83e-08,33;UBERON:0006914,4.35e-07,25;UBERON:0002100,9.27e-07,199 | |||
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| |||
|short_description=p3@SF3B5 | |||
}} |
Revision as of 14:24, 22 January 2014
Short description: | p3@SF3B5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SF3B5_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000367569, NM_031287, uc003qkr.1_5end |
EntrezGene: | SF3B5 |
HGNC: | 21083 |
UniProt: | Q9BWJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.19e-19 | 121 |
electrically responsive cell | 1.07e-15 | 61 |
electrically active cell | 1.07e-15 | 61 |
muscle cell | 1.19e-15 | 55 |
muscle precursor cell | 8.11e-15 | 58 |
myoblast | 8.11e-15 | 58 |
multi-potent skeletal muscle stem cell | 8.11e-15 | 58 |
smooth muscle cell | 1.09e-12 | 43 |
smooth muscle myoblast | 1.09e-12 | 43 |
vascular associated smooth muscle cell | 1.23e-10 | 32 |
embryonic cell | 8.64e-10 | 250 |
meso-epithelial cell | 2.57e-09 | 45 |
endothelial cell | 4.30e-09 | 36 |
multi fate stem cell | 4.66e-09 | 427 |
somatic stem cell | 9.12e-09 | 433 |
stem cell | 9.03e-08 | 441 |