FFCP PHASE1:Hg19::chr6:34212645..34212664,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:34212645..34212664,+ | |||
|id=chr6:34212645..34212664,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.49e-22!679;CL:0000004!2.49e-22!679;CL:0000255!2.49e-22!679;CL:0000012!1.02e-21!682;CL:0002321!5.75e-17!248;CL:0000222!1.98e-16!119;CL:0000220!2.58e-16!246;CL:0000144!6.58e-14!625;CL:0000003!3.11e-13!722;CL:0000066!4.23e-13!254;CL:0000183!1.21e-10!59;CL:0002371!2.33e-10!591;CL:0000055!1.37e-09!180;CL:0000393!2.64e-09!60;CL:0000211!2.64e-09!60;CL:0000187!2.93e-09!54;CL:0000115!7.15e-09!35;CL:0000680!7.76e-09!57;CL:0000056!7.76e-09!57;CL:0000355!7.76e-09!57;CL:0002078!2.05e-08!44;CL:1000449!7.67e-08!16;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0000192!3.39e-07!42;CL:0000514!3.39e-07!42;CL:0002139!5.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.85e-11;36!CL:1000449;4.37e-10;15!CL:1000497;2.23e-08;17!CL:0002518;2.23e-08;17!CL:0002139;3.75e-08;24!CL:0002681;4.30e-08;12!CL:0002584;4.30e-08;12!CL:0000071;9.46e-08;18!CL:1000746;6.16e-07;7!CL:1000612;6.16e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.59e-18,121;CL:0002321,6.60e-18,250;CL:0000115,8.98e-12,36;CL:0002078,1.91e-10,45;CL:1000449,3.45e-10,15;CL:0000393,1.01e-09,61;CL:0000211,1.01e-09,61;CL:0000213,2.22e-09,58;CL:0000215,2.22e-09,58;CL:0000187,6.67e-09,55;CL:0000680,9.30e-09,58;CL:0000056,9.30e-09,58;CL:0000355,9.30e-09,58;CL:0000066,1.68e-08,253;CL:1000497,1.82e-08,17;CL:0002518,1.82e-08,17;CL:0002681,3.51e-08,12;CL:0002584,3.51e-08,12;CL:0002139,3.70e-08,24;CL:0000071,5.15e-08,18;CL:0002546,5.15e-08,18;CL:1000746,5.86e-07,7;CL:1000612,5.86e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;9.46e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!4.12e-11!138;UBERON:0005256!1.10e-10!143;UBERON:0002049!1.87e-10!79;UBERON:0007798!1.87e-10!79;UBERON:0004290!2.39e-10!70;UBERON:0000914!4.68e-10!83;UBERON:0002329!4.68e-10!83;UBERON:0003077!4.68e-10!83;UBERON:0003059!4.68e-10!83;UBERON:0007282!4.68e-10!83;UBERON:0009618!4.68e-10!83;UBERON:0007285!4.68e-10!83;UBERON:0000055!7.38e-10!69;UBERON:0003914!1.78e-09!118;UBERON:0003104!2.25e-09!238;UBERON:0009142!2.25e-09!238;UBERON:0002100!1.85e-08!216;UBERON:0001981!4.01e-08!60;UBERON:0007500!4.01e-08!60;UBERON:0004537!4.01e-08!60;UBERON:0006965!4.01e-08!60;UBERON:0000486!6.18e-08!82;UBERON:0001134!7.05e-08!61;UBERON:0002036!7.05e-08!61;UBERON:0003082!7.05e-08!61;UBERON:0004211!7.67e-08!16;UBERON:0001285!7.67e-08!16;UBERON:0007684!7.67e-08!16;UBERON:0003220!7.67e-08!16;UBERON:0004208!7.67e-08!16;UBERON:0001637!1.04e-07!42;UBERON:0003509!1.04e-07!42;UBERON:0004572!1.04e-07!42;UBERON:0002385!3.16e-07!63;UBERON:0001015!3.16e-07!63;UBERON:0000383!3.16e-07!63;UBERON:0006555!7.68e-07!17;UBERON:0005103!7.68e-07!17;UBERON:0000083!7.68e-07!17;UBERON:0009201!7.68e-07!17;UBERON:0004819!7.68e-07!17;UBERON:0006553!7.68e-07!17;UBERON:0003074!7.68e-07!17;UBERON:0003060!7.68e-07!17;UBERON:0004872!9.98e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.37e-10;15!UBERON:0004819;4.37e-10;15!UBERON:0001285;4.37e-10;15!UBERON:0007684;4.37e-10;15!UBERON:0003914;2.61e-08;74!UBERON:0001225;4.30e-08;12!UBERON:0008987;4.30e-08;12!UBERON:0004638;9.46e-08;18!UBERON:0001986;9.46e-08;18!UBERON:0004852;9.46e-08;18!UBERON:0000487;2.36e-07;22!UBERON:0000353;2.44e-07;15!UBERON:0000490;4.18e-07;33!UBERON:0000074;6.16e-07;7!UBERON:0001229;6.16e-07;7!UBERON:0000025;6.59e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.58e-15,78;UBERON:0000490,2.56e-14,148;UBERON:0007524,2.93e-11,73;UBERON:0002329,3.16e-11,71;UBERON:0003059,3.16e-11,71;UBERON:0007282,3.16e-11,71;UBERON:0004290,3.16e-11,71;UBERON:0009618,3.16e-11,71;UBERON:0000055,3.44e-11,68;UBERON:0003914,3.89e-11,117;UBERON:0002049,5.85e-11,78;UBERON:0007798,5.85e-11,78;UBERON:0003077,6.78e-11,72;UBERON:0007285,6.78e-11,72;UBERON:0002100,7.21e-11,199;UBERON:0004211,3.45e-10,15;UBERON:0009773,3.45e-10,15;UBERON:0001231,3.45e-10,15;UBERON:0001285,3.45e-10,15;UBERON:0007684,3.45e-10,15;UBERON:0004208,3.45e-10,15;UBERON:0007500,1.10e-09,59;UBERON:0001981,1.10e-09,59;UBERON:0004537,1.10e-09,59;UBERON:0006965,1.10e-09,59;UBERON:0003104,1.38e-09,160;UBERON:0009142,1.38e-09,160;UBERON:0005256,2.06e-09,122;UBERON:0006555,2.86e-09,16;UBERON:0004819,2.86e-09,16;UBERON:0000486,6.34e-09,83;UBERON:0001637,1.42e-08,42;UBERON:0003509,1.42e-08,42;UBERON:0004572,1.42e-08,42;UBERON:0000119,2.44e-08,309;UBERON:0001225,3.51e-08,12;UBERON:0008987,3.51e-08,12;UBERON:0004638,5.15e-08,18;UBERON:0001986,5.15e-08,18;UBERON:0004852,5.15e-08,18;UBERON:0000487,1.16e-07,22;UBERON:0000483,1.31e-07,306;UBERON:0001134,1.39e-07,62;UBERON:0002036,1.39e-07,62;UBERON:0003082,1.39e-07,62;UBERON:0000353,2.09e-07,15;UBERON:0004872,3.13e-07,83;UBERON:0002385,4.62e-07,64;UBERON:0001015,4.62e-07,64;UBERON:0000383,4.62e-07,64;UBERON:0010532,5.86e-07,7;UBERON:0000074,5.86e-07,7;UBERON:0001229,5.86e-07,7;UBERON:0001230,5.86e-07,7;UBERON:0003220,5.86e-07,7;UBERON:0005749,5.86e-07,7;UBERON:0004199,5.86e-07,7;UBERON:0004209,5.86e-07,7;UBERON:0004198,5.86e-07,7;UBERON:0004535,8.25e-07,109 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,1.72013755551056,10.4670175195864,0.436882744260345,0.527533956456907,1.23766352960047,1.98838425436749,2.6893005858071,1.20538905604795,1.46062018077475,0.487932798790507,1.47745269692145,4.48801520737357,1.25381888591235,0.286235987131057,2.6006140763848,0.502170558379211,2.8272960126742,2.21671591514854,2.04648031415566,0,0,0,3.67768489791571,3.614471025339,8.50434223383612,0.774672005803016,0.426507697462265,0.293600439334847,0.553995408531877,0,0,0,0.32389366601898,0,0.872389432677388,0.755751887377619,0.727752183563449,0.464858073811369,0.822335776043652,0,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0.941211697713023,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,1.81619850790011,0.736555271975129,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0.579606171470105,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0.255973222308837,0,0,0,0,0.534880391567015,0,2.43806866313962,2.68280343881454,0.12786256184353,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0.661743720148475,1.10864698731282,0.790513071238134,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,1.78886166630035,2.58070378531837,1.73570250803797,0,1.25849830862972,4.12677062910101,3.9709043641994,1.29208379584664,0.71153252537342,0.66944122552934,1.61131726843659,0.760272105718513,0.732186172644509,1.10298924103761,3.24056779152704,2.58969212023831,3.36794058939255,2.36484109014977,0,5.69559395740877,3.66403487860815,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0.286836620748814,1.41867352879343,2.24271040056923,0,0.24666754841716,0.311211035399766,1.61652806483626,1.14423332179421,0,1.15235184896,1.64025002283658,1.5608003841516,1.1409436430889,2.98897361103602,4.57994544710683,3.72307772046703,5.05622904128095,3.47062091133319,8.22989925988845,2.27316718586684,0,0.989067717114227,4.55080680969013,5.03032699271367,1.0100166837244,14.2635112654039,1.10825646193673,0,0.612975591598039,1.05166641234618,0.567160915800105,0,0,0.211931901159562,0,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.368199594569197,0.323292113637624,0,0.403008392910561,0.339121184620975,0,0,1.14721838155602,2.5614478287215,1.72288698817931,2.5562667431294,1.86589899027667,3.28017106138317,5.10968302706162,1.56449532329816,0,4.14404764057442,2.3218396401599,1.44375896333917,1.41968160047813,1.01150814046861,0.241011029883482,0.992645754591546,0.217879444092406,1.18635309555548,0.943819157121151,0.588664395376038,1.53898862778556,0.738155454624648,4.20725321410337,0.4115740113314,0,0,0,0,0,0.368965315629341,0.514703430895577,0.329250856225877,2.24803506515239,0.703702806881416,1.29623823221941,1.95484983186195,3.11980435583874,2.88662684050547,0.463721619900307,0,1.01056513432752,1.38895653772983,1.14152491340759,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.268675568108545,0.581267877027924,0.383382679165211,0.985326475791887,0.088048434013226,0,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0.600686115687835,0.857479297891735,1.45770409648969,1.74384027533312,1.7601188597028,0.129271715757778,0,0.845302752556,0,0,0.771622122786426,7.09245660116391,5.86128793835419,0.285955987316295,0,0.823240336780769,1.30294473717494,0,0.791951872933429,0.301439377059586,2.61460037580088,1.29964888536674,0,0,0,0.239624855491583,0,0,0.144781306667579,2.4657158706046,0,0,0,0.431255149719035,0.128343036279748,2.03275699377971,0,0,0.167516265334349,0,0,0,0.414415513436035,1.34960640891054,2.00068208423871,3.25518028439683,0.623912584592421,1.07057393278297,0.157702415033935,0.585707074963566,0.902838299183157,0,2.0694614258501,0.664225598535437,1.10621501125022,1.47702144595741,0.783204629850962,1.02943027143257,0,0.215714200818617,0.213455115606889,0.303127571446259,1.66435439510497,0.907170879989041,0,0,0,0.128139149255701,0,0.160853921143607,0,3.85524234506639,0.710246901252508,0.739144404124282,3.63478100428535,3.25389059687886,0.362578348774867,1.00253235151642,2.20994373446151,0.34444334449382,4.18809686415449,1.44236856455367,0.902399225814824,1.30926073077505,3.13739907670742,2.92278449306521,1.26661954671451,5.68666920354483,6.46356080050759,2.80690690932781,1.54227252690289,1.08378575017541,2.50844886927427,2.29388645740534,1.66215201785745,2.23874754722178,0.219259876645935,0,2.05160100093111,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,0,0,1.54673149267395,2.7728751080636,2.6095624703442,2.34322173223702,1.28904293841928,1.74020032697074,2.55679882248303,0.0890320356467374,0.330569830721956,0.192190067365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| |||
|short_description=p@chr6:34212645..34212664,+ | |||
}} |
Revision as of 11:29, 22 January 2014
Short description: | p@chr6:34212645..34212664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34212645..34212664, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.59e-18 | 121 |
embryonic cell | 6.60e-18 | 250 |
endothelial cell | 8.98e-12 | 36 |
meso-epithelial cell | 1.91e-10 | 45 |
epithelial cell of nephron | 3.45e-10 | 15 |
electrically responsive cell | 1.01e-09 | 61 |
electrically active cell | 1.01e-09 | 61 |
lining cell | 2.22e-09 | 58 |
barrier cell | 2.22e-09 | 58 |
muscle cell | 6.67e-09 | 55 |
muscle precursor cell | 9.30e-09 | 58 |
myoblast | 9.30e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.30e-09 | 58 |
epithelial cell | 1.68e-08 | 253 |
kidney cell | 1.82e-08 | 17 |
kidney epithelial cell | 1.82e-08 | 17 |
kidney cortical cell | 3.51e-08 | 12 |
renal cortical epithelial cell | 3.51e-08 | 12 |
endothelial cell of vascular tree | 3.70e-08 | 24 |
blood vessel endothelial cell | 5.15e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.15e-08 | 18 |
glomerular cell | 5.86e-07 | 7 |
kidney corpuscule cell | 5.86e-07 | 7 |