FFCP PHASE1:Hg19::chr9:140446314..140446398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14492 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IXM3 | |||
|association_with_transcript=5bp_to_NM_032477,uc004cnh.3_5end | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_MRPL41_5end | |||
|id=chr9:140446314..140446398,+ | |||
|ontology_enrichment_celltype=CL:0000220!6.60e-28!246;CL:0002321!1.10e-27!248;CL:0000222!2.62e-20!119;CL:0000183!1.17e-18!59;CL:0000393!4.02e-17!60;CL:0000211!4.02e-17!60;CL:0000187!1.79e-16!54;CL:0000680!4.21e-16!57;CL:0000056!4.21e-16!57;CL:0000355!4.21e-16!57;CL:0000055!6.14e-16!180;CL:0000192!5.88e-15!42;CL:0000514!5.88e-15!42;CL:0000548!3.20e-12!679;CL:0000004!3.20e-12!679;CL:0000255!3.20e-12!679;CL:0000359!3.82e-12!32;CL:0000012!1.28e-11!682;CL:0000144!1.69e-11!625;CL:0000066!1.96e-11!254;CL:0002371!8.21e-11!591;CL:0000325!4.52e-07!39;CL:0000136!7.76e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.21e-11;32!CL:0000192;1.02e-10;43!CL:0000187;1.74e-09;55!CL:0000393;1.99e-08;61!CL:0000211;1.99e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.71e-28,250;CL:0000222,1.03e-20,121;CL:0000393,2.96e-17,61;CL:0000211,2.96e-17,61;CL:0000187,1.34e-16,55;CL:0000680,3.10e-16,58;CL:0000056,3.10e-16,58;CL:0000355,3.10e-16,58;CL:0000192,4.58e-15,43;CL:0000514,4.58e-15,43;CL:0000359,3.82e-12,32;CL:0000066,2.71e-11,253;CL:0000136,7.76e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-10;43!CL:0000355;7.81e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.16e-23!216;UBERON:0005256!1.93e-21!143;UBERON:0000486!5.45e-21!82;UBERON:0004290!8.83e-21!70;UBERON:0000914!1.70e-20!83;UBERON:0002329!1.70e-20!83;UBERON:0003077!1.70e-20!83;UBERON:0003059!1.70e-20!83;UBERON:0007282!1.70e-20!83;UBERON:0009618!1.70e-20!83;UBERON:0007285!1.70e-20!83;UBERON:0003104!1.28e-18!238;UBERON:0009142!1.28e-18!238;UBERON:0001134!5.35e-18!61;UBERON:0002036!5.35e-18!61;UBERON:0003082!5.35e-18!61;UBERON:0003914!1.45e-17!118;UBERON:0000490!1.30e-16!138;UBERON:0002385!1.64e-16!63;UBERON:0001015!1.64e-16!63;UBERON:0000383!1.64e-16!63;UBERON:0004872!6.51e-14!84;UBERON:0002049!1.40e-13!79;UBERON:0007798!1.40e-13!79;UBERON:0001981!7.74e-13!60;UBERON:0007500!7.74e-13!60;UBERON:0004537!7.74e-13!60;UBERON:0006965!7.74e-13!60;UBERON:0000055!6.75e-12!69;UBERON:0000483!1.11e-11!309;UBERON:0000119!1.20e-11!312;UBERON:0000481!3.46e-11!347;UBERON:0000475!7.56e-11!365;UBERON:0003103!8.28e-11!69;UBERON:0001637!3.03e-10!42;UBERON:0003509!3.03e-10!42;UBERON:0004572!3.03e-10!42;UBERON:0009569!2.35e-09!113;UBERON:0001009!3.01e-09!113;UBERON:0004535!3.14e-08!110;UBERON:0007100!9.86e-08!27;UBERON:0004573!3.03e-07!33;UBERON:0004571!3.03e-07!33;UBERON:0000926!7.08e-07!448;UBERON:0004120!7.08e-07!448;UBERON:0006603!7.08e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;9.67e-08;74!UBERON:0001637;3.61e-07;42!UBERON:0003509;3.61e-07;42!UBERON:0004572;3.61e-07;42!UBERON:0007500;3.89e-07;56!UBERON:0001981;3.89e-07;56!UBERON:0004537;3.89e-07;56!UBERON:0007100;8.07e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.18e-24,78;UBERON:0002100,1.93e-23,199;UBERON:0000486,3.88e-21,83;UBERON:0002329,6.47e-21,71;UBERON:0003059,6.47e-21,71;UBERON:0007282,6.47e-21,71;UBERON:0004290,6.47e-21,71;UBERON:0009618,6.47e-21,71;UBERON:0003104,1.26e-20,160;UBERON:0009142,1.26e-20,160;UBERON:0007524,2.83e-20,73;UBERON:0003077,3.40e-20,72;UBERON:0007285,3.40e-20,72;UBERON:0000490,2.27e-19,148;UBERON:0005256,8.97e-19,122;UBERON:0001134,3.95e-18,62;UBERON:0002036,3.95e-18,62;UBERON:0003082,3.95e-18,62;UBERON:0003914,2.11e-17,117;UBERON:0002385,1.19e-16,64;UBERON:0001015,1.19e-16,64;UBERON:0000383,1.19e-16,64;UBERON:0004872,7.73e-14,83;UBERON:0002049,1.66e-13,78;UBERON:0007798,1.66e-13,78;UBERON:0007500,8.82e-13,59;UBERON:0001981,8.82e-13,59;UBERON:0004537,8.82e-13,59;UBERON:0006965,8.82e-13,59;UBERON:0000483,3.67e-12,306;UBERON:0000119,4.03e-12,309;UBERON:0000055,7.93e-12,68;UBERON:0003103,1.16e-10,68;UBERON:0001637,3.03e-10,42;UBERON:0003509,3.03e-10,42;UBERON:0004572,3.03e-10,42;UBERON:0001009,3.66e-09,112;UBERON:0009569,4.46e-09,112;UBERON:0004535,3.80e-08,109;UBERON:0007100,9.86e-08,27;UBERON:0004573,3.03e-07,33;UBERON:0004571,3.03e-07,33 | |||
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| |||
|short_description=p1@MRPL41 | |||
}} |
Revision as of 04:21, 23 January 2014
Short description: | p1@MRPL41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL41_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 5bp_to_NM_032477, uc004cnh.3_5end |
EntrezGene: | MRPL41 |
HGNC: | 14492 |
UniProt: | Q8IXM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.71e-28 | 250 |
mesodermal cell | 1.03e-20 | 121 |
electrically responsive cell | 2.96e-17 | 61 |
electrically active cell | 2.96e-17 | 61 |
muscle cell | 1.34e-16 | 55 |
muscle precursor cell | 3.10e-16 | 58 |
myoblast | 3.10e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-16 | 58 |
smooth muscle cell | 4.58e-15 | 43 |
smooth muscle myoblast | 4.58e-15 | 43 |
vascular associated smooth muscle cell | 3.82e-12 | 32 |
epithelial cell | 2.71e-11 | 253 |
fat cell | 7.76e-07 | 15 |