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FFCP PHASE1:Mm9::chr6:38825964..38825985,-: Difference between revisions

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{{FFCP|EntrezGene=15258|HGNC=|UniProt=Q9QZR5|association_with_transcript=0bp_to_ENSMUST00000160360_5end|description=CAGE_peak_3_at_Hipk2_5end|id=chr6:38825964..38825985,-|ontology_enrichment_celltype=CL:0000117!3.25e-13!23;CL:0000337!3.25e-13!23;CL:0000540!4.14e-12!33;CL:0000047!4.14e-12!33;CL:0000031!4.14e-12!33;CL:0000404!4.14e-12!33;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39;CL:0002319!9.46e-08!43;CL:0000221!1.94e-07!44;CL:0000133!1.94e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-13,23;CL:0000337,2.41e-13,23;CL:0000540,3.55e-12,33;CL:0000047,3.55e-12,33;CL:0000031,3.55e-12,33;CL:0000404,3.55e-12,33;CL:0000393,2.34e-08,39;CL:0000211,2.34e-08,39;CL:0002319,1.36e-07,43;CL:0000221,2.76e-07,44;CL:0000133,2.76e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.23e-12!73;UBERON:0005743!3.23e-12!73;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0000073!3.08e-11!75;UBERON:0001016!3.08e-11!75;UBERON:0004121!7.82e-11!102;UBERON:0000924!7.82e-11!102;UBERON:0006601!7.82e-11!102;UBERON:0001049!4.84e-10!52;UBERON:0005068!4.84e-10!52;UBERON:0006241!4.84e-10!52;UBERON:0007135!4.84e-10!52;UBERON:0000033!4.53e-09!63;UBERON:0002020!5.23e-09!34;UBERON:0000955!2.09e-08!50;UBERON:0006238!2.09e-08!50;UBERON:0002616!3.54e-08!49;UBERON:0003056!2.72e-07!49;UBERON:0000922!5.41e-07!328;UBERON:0000468!5.91e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.95e-12,73;UBERON:0002346,8.61e-12,64;UBERON:0003075,8.61e-12,64;UBERON:0007284,8.61e-12,64;UBERON:0001016,3.67e-11,75;UBERON:0000073,8.86e-11,54;UBERON:0004121,1.70e-10,95;UBERON:0000924,1.70e-10,95;UBERON:0006601,1.70e-10,95;UBERON:0001049,4.42e-10,52;UBERON:0005068,4.42e-10,52;UBERON:0006241,4.42e-10,52;UBERON:0007135,4.42e-10,52;UBERON:0002020,3.86e-09,34;UBERON:0010371,7.56e-09,73;UBERON:0003056,2.16e-07,49;UBERON:0000955,2.63e-07,47;UBERON:0006238,2.63e-07,47;UBERON:0002616,4.39e-07,46;UBERON:0011216,8.64e-07,194|phase1_expression=0.640595388419176,3.14077866875425,3.18499467572675,4.53696316960245,4.00716583957078,3.69334398206158,3.03696432774183,0.645616617207881,0.84473233291,0.468129052643987,0.34243593645101,0.159544317990673,0.856003649656029,0.786783621770977,2.33176833270964,2.63217847606774,2.09868563438444,0.630924330716475,0.411343300817216,1.69755860719212,3.14660173558958,0.496454756004426,0.783599367416806,0.799962113967033,0.91763712426868,1.14846392823004,2.15380998079537,3.01659725760245,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,2.3108129580102,1.82858109894342,0.612508068787107,1.67412652294763,0.7813353445238,1.0470474879476,2.35292595212406,2.04913645487534,1.94204141212461,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,2.61630187656536,1.75748946187577,1.94429899074283,0.839918529752175,1.43752564364972,1.00669563634642,0,1.68046899571232,1.02903774414379,1.14613375975503,2.57836046138721,10.9250888864183,6.34789175126439,12.6766280701236,1.0165335962074,0,2.2497492932035,0,2.1314403448383,1.19840044207362,2.30530983192933,6.73982480005105,5.26523159493594,6.73039876324422,7.14127461009509,5.52171352379034,5.75706756310284,4.40889166683887,2.75765635983006,6.60695285996332,3.83062014255563,3.99376986466233,9.89147157976454,9.05727671663856,8.33461392890816,3.35019598801657,4.50210088025344,3.0559649555362,8.2496003932627,8.11518580554887,8.38797506213853,0.530083353332288,1.36028808192214,5.79728977403356,0,0.679971333707751,1.07940638327563,1.94932925234301,3.58421509677868,0.983110940922263,1.02258193546835,0.779358013808606,0.35333957451034,1.54927761754349,2.56652954828636,7.64415719119937,14.2213340630666,0.432982082022428,0.506719730950197,1.01104889002957,2.51204535381932,3.88406825470758,3.26572705942614,2.25530924795977,2.13125834818499,2.30615497256059,1.95939432718409,2.82212897125692,2.13633205260448,1.48316980640624,2.4581890676385,5.30766331169925,2.91180329905337,1.32504911076236,2.90925151881133,3.72783522436244,4.9772735491963,6.0739544975902,2.29911349687732,0.599075622529601,1.19980546198682,0.381210681219194,3.44518470631092,0.457500602818626,2.63874139437015,2.78118912307642,2.30143911597297,5.61027720310812,2.59586020908412,1.12023300235348,2.36373244159177,0,2.73574412652416,2.47228841629137,2.29902104433473,2.70093194708024,2.71268672104287,3.81004395247436,3.97152532883034,3.5606655332697,2.84573707812917,2.58681591519411,2.45837904218165,1.93546236580344,1.09597866213787,2.50242524303038,2.089512999133,0.61734640922383,0.995171334092466,0,0.772043721344145,1.13665399758237,1.65700618028402,0.938104239924385,1.08037236876609,0.710234206755631,1.18058539048442,0.925602677324269,0.697601834251224,1.3413670069981,1.98501082024188,1.15191894939436,2.29834449710733,2.1888578577381,0.730999937126662,1.09775057645525,2.41571553768669,1.89260953707715,5.04232600658494,4.62586296177317,3.43785736662608,2.34617075588757,2.09013004674395,2.31961430379768,3.0252528693501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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:15258
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9QZR5
|association_with_transcript=0bp_to_ENSMUST00000160360_5end
|cluster_id=chr6:38825964..38825985,-
|description=CAGE_peak_3_at_Hipk2_5end
|id=chr6:38825964..38825985,-
|ontology_enrichment_celltype=CL:0000117!3.25e-13!23;CL:0000337!3.25e-13!23;CL:0000540!4.14e-12!33;CL:0000047!4.14e-12!33;CL:0000031!4.14e-12!33;CL:0000404!4.14e-12!33;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39;CL:0002319!9.46e-08!43;CL:0000221!1.94e-07!44;CL:0000133!1.94e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-13,23;CL:0000337,2.41e-13,23;CL:0000540,3.55e-12,33;CL:0000047,3.55e-12,33;CL:0000031,3.55e-12,33;CL:0000404,3.55e-12,33;CL:0000393,2.34e-08,39;CL:0000211,2.34e-08,39;CL:0002319,1.36e-07,43;CL:0000221,2.76e-07,44;CL:0000133,2.76e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.23e-12!73;UBERON:0005743!3.23e-12!73;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0000073!3.08e-11!75;UBERON:0001016!3.08e-11!75;UBERON:0004121!7.82e-11!102;UBERON:0000924!7.82e-11!102;UBERON:0006601!7.82e-11!102;UBERON:0001049!4.84e-10!52;UBERON:0005068!4.84e-10!52;UBERON:0006241!4.84e-10!52;UBERON:0007135!4.84e-10!52;UBERON:0000033!4.53e-09!63;UBERON:0002020!5.23e-09!34;UBERON:0000955!2.09e-08!50;UBERON:0006238!2.09e-08!50;UBERON:0002616!3.54e-08!49;UBERON:0003056!2.72e-07!49;UBERON:0000922!5.41e-07!328;UBERON:0000468!5.91e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.95e-12,73;UBERON:0002346,8.61e-12,64;UBERON:0003075,8.61e-12,64;UBERON:0007284,8.61e-12,64;UBERON:0001016,3.67e-11,75;UBERON:0000073,8.86e-11,54;UBERON:0004121,1.70e-10,95;UBERON:0000924,1.70e-10,95;UBERON:0006601,1.70e-10,95;UBERON:0001049,4.42e-10,52;UBERON:0005068,4.42e-10,52;UBERON:0006241,4.42e-10,52;UBERON:0007135,4.42e-10,52;UBERON:0002020,3.86e-09,34;UBERON:0010371,7.56e-09,73;UBERON:0003056,2.16e-07,49;UBERON:0000955,2.63e-07,47;UBERON:0006238,2.63e-07,47;UBERON:0002616,4.39e-07,46;UBERON:0011216,8.64e-07,194
|phase1_expression=0.640595388419176,3.14077866875425,3.18499467572675,4.53696316960245,4.00716583957078,3.69334398206158,3.03696432774183,0.645616617207881,0.84473233291,0.468129052643987,0.34243593645101,0.159544317990673,0.856003649656029,0.786783621770977,2.33176833270964,2.63217847606774,2.09868563438444,0.630924330716475,0.411343300817216,1.69755860719212,3.14660173558958,0.496454756004426,0.783599367416806,0.799962113967033,0.91763712426868,1.14846392823004,2.15380998079537,3.01659725760245,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,2.3108129580102,1.82858109894342,0.612508068787107,1.67412652294763,0.7813353445238,1.0470474879476,2.35292595212406,2.04913645487534,1.94204141212461,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,2.61630187656536,1.75748946187577,1.94429899074283,0.839918529752175,1.43752564364972,1.00669563634642,0,1.68046899571232,1.02903774414379,1.14613375975503,2.57836046138721,10.9250888864183,6.34789175126439,12.6766280701236,1.0165335962074,0,2.2497492932035,0,2.1314403448383,1.19840044207362,2.30530983192933,6.73982480005105,5.26523159493594,6.73039876324422,7.14127461009509,5.52171352379034,5.75706756310284,4.40889166683887,2.75765635983006,6.60695285996332,3.83062014255563,3.99376986466233,9.89147157976454,9.05727671663856,8.33461392890816,3.35019598801657,4.50210088025344,3.0559649555362,8.2496003932627,8.11518580554887,8.38797506213853,0.530083353332288,1.36028808192214,5.79728977403356,0,0.679971333707751,1.07940638327563,1.94932925234301,3.58421509677868,0.983110940922263,1.02258193546835,0.779358013808606,0.35333957451034,1.54927761754349,2.56652954828636,7.64415719119937,14.2213340630666,0.432982082022428,0.506719730950197,1.01104889002957,2.51204535381932,3.88406825470758,3.26572705942614,2.25530924795977,2.13125834818499,2.30615497256059,1.95939432718409,2.82212897125692,2.13633205260448,1.48316980640624,2.4581890676385,5.30766331169925,2.91180329905337,1.32504911076236,2.90925151881133,3.72783522436244,4.9772735491963,6.0739544975902,2.29911349687732,0.599075622529601,1.19980546198682,0.381210681219194,3.44518470631092,0.457500602818626,2.63874139437015,2.78118912307642,2.30143911597297,5.61027720310812,2.59586020908412,1.12023300235348,2.36373244159177,0,2.73574412652416,2.47228841629137,2.29902104433473,2.70093194708024,2.71268672104287,3.81004395247436,3.97152532883034,3.5606655332697,2.84573707812917,2.58681591519411,2.45837904218165,1.93546236580344,1.09597866213787,2.50242524303038,2.089512999133,0.61734640922383,0.995171334092466,0,0.772043721344145,1.13665399758237,1.65700618028402,0.938104239924385,1.08037236876609,0.710234206755631,1.18058539048442,0.925602677324269,0.697601834251224,1.3413670069981,1.98501082024188,1.15191894939436,2.29834449710733,2.1888578577381,0.730999937126662,1.09775057645525,2.41571553768669,1.89260953707715,5.04232600658494,4.62586296177317,3.43785736662608,2.34617075588757,2.09013004674395,2.31961430379768,3.02525286935014,2.44615848229357,1.90225626112559,3.32170343081158,1.64698954724011,2.26201687920243,1.79060824837036,2.72949721966768,6.29173586057955,1.51296634912286,3.18626037206988,0.758671603812327,1.5994791765362,2.25415471346161,4.88763186828754,2.32742984601151,4.97964321221262,4.93244989569207,5.31396532726568,3.92496819603437,2.96153193412321,2.07516838961004,4.33797274861845,3.14494392181125,4.27238013531222,2.63718157805054,5.54707467430559,2.29163266603278,5.4662266115654,2.43202840162553,1.64736847912849,2.87536413054709,1.48856379067401,1.5601883655728,1.51547326768267,1.79397413521912,2.41221760681684,4.61882975416512,0.757965647081939,1.79261474086228,1.86719594352707,2.81628297946203,3.01511263395268,5.2369600994923,5.65887578787617,3.4679731703362,4.20782910332672,4.9430978283821,3.27726629431476,2.24490476425664,5.06271705035291,1.50791283939272,2.17562273527484,1.96705709207614,2.20749397043786,3.53211297973142,4.57125577709592,1.47541450839008,1.76729649043061,2.2085575359138,2.34263246577983,4.73931475012158,1.91175038362042,2.22798674082394,2.83076530788832,2.83367491172426,3.79932615284705,4.34816555741176,3.21321316421807,2.41298144854057,0.178065603667255,0.81443479676788,1.81467135269789,3.98235415019888,0.971122544619926,2.72091201268276,1.88605079755898,1.77181135728464,3.68922177532713,2.32585463851399,3.27180356529755,2.13898427030833,1.58018378967908,4.21674434299995,6.18813259489121,3.40439605753788,1.8006109403131,1.68166288917581,1.07168517515796,3.54680467284547,1.96205699362278,1.31639216481697,2.13125464380219,1.17335854031855,1.69465656691056,1.54369878638473,1.97863503529776,0.968786560175433,1.5078231232039,1.07435109602823,1.14898629821543,3.49777003955821,7.6024373824309,3.41741761595705,1.03193433981611,2.77791791054568,2.26042148405629,2.87057878214153,1.14389086603261,0.679913719975421,0.419854356970974,0.552799895217695,2.86401185404534,1.26534397432454,1.62655573701479,1.08005340821801,2.09088296014469,0.655087691238533,1.61837215661785,1.65306911450672,0.523511883968059,1.94422459937689,4.34937519160848,0.56369293868419,0.448549638131936,0.330916980914195,1.55560950675238,0.774958940866387,1.18269287843545,1.17357238645754,0.781226309063701,0.419437377702843,0.724752362478018,1.44015003128933,0.632022241256357,0.608175645870493,0.410843828659309,0.649604114888975,0.537080087002444,0.596044064343795,0.480781798079875,0.147689527174577,0.504832249740738,0.304827226619999,0.806609481094724,0.487289403698762,0.192423683280659,0.584384510907845,1.81384306892169,0,0,0,2.12508553435409,0.93841237725591,1.09890974560359,2.57242054894879,1.00314420807073,4.51801474093653,3.22227665555024,4.01026859407578,3.09335728218638,1.37016503954128,2.2661816921691,4.72515750162264,1.80128481289688,4.07828168085784,3.10656187051092,2.07574695168353,5.98537310101547,3.07320490357441,1.70174701947806,2.93458427679175,3.49302666055027,2.66696073361938,3.5025959730612,3.20919209591815,2.52697211763797,1.2673964994512,1.88626341386076,2.34103768674706,2.81710670581425,3.50356360629241,2.85776214769844,3.59241410429052,2.89363830695558,4.12085900803307,3.09117732282234,2.74295401908332,1.59728225543404,2.62279808942053,3.19762116591123,2.63506265162926,3.13074049199203,2.37806364734604,2.89376682581627,2.71608227691724,3.36685362994643,3.08451047122853,2.75812550651578,3.27384834535751,2.47898945897546,2.3148793317737,1.74867404556562,1.87145286756327,1.28922632428979,1.53030665655075,1.76473135295612,1.39120701372253
|short_description=p3@Hipk2
}}

Revision as of 16:10, 5 August 2015

Short description:p3@Hipk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hipk2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000160360_5end
EntrezGene:15258
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Hipk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G74.98
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.41e-1323
neuroblast (sensu Vertebrata)2.41e-1323
neuron3.55e-1233
neuronal stem cell3.55e-1233
neuroblast3.55e-1233
electrically signaling cell3.55e-1233
electrically responsive cell2.34e-0839
electrically active cell2.34e-0839
neural cell1.36e-0743
ectodermal cell2.76e-0744
neurectodermal cell2.76e-0744

Uber anatomy
Ontology termp-valuen
central nervous system3.95e-1273
neurectoderm8.61e-1264
neural plate8.61e-1264
presumptive neural plate8.61e-1264
nervous system3.67e-1175
regional part of nervous system8.86e-1154
ectoderm-derived structure1.70e-1095
ectoderm1.70e-1095
presumptive ectoderm1.70e-1095
neural tube4.42e-1052
neural rod4.42e-1052
future spinal cord4.42e-1052
neural keel4.42e-1052
gray matter3.86e-0934
ecto-epithelium7.56e-0973
pre-chordal neural plate2.16e-0749
brain2.63e-0747
future brain2.63e-0747
regional part of brain4.39e-0746
organ system subdivision8.64e-07194
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