FFCP PHASE1:Mm9::chr8:107812968..107812983,-: Difference between revisions
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{{FFCP|EntrezGene=74356|HGNC=|MCL_coexpression_id=335|UniProt=|association_with_transcript=81bp_to_uc009ncf.1_5end|description=CAGE_peak_2_at_4931428F04Rik_5end|id=chr8:107812968..107812983,-|ontology_enrichment_celltype=CL:0000540!1.73e-12!33;CL:0000047!1.73e-12!33;CL:0000031!1.73e-12!33;CL:0000404!1.73e-12!33;CL:0000117!3.36e-12!23;CL:0000337!3.36e-12!23;CL:0000393!2.55e-10!39;CL:0000211!2.55e-10!39;CL:0002319!8.16e-09!43;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002321!7.11e-08!70;CL:0000220!7.11e-08!70;CL:0000055!4.79e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.69e-17,23;CL:0000337,8.69e-17,23;CL:0000540,7.64e-14,33;CL:0000047,7.64e-14,33;CL:0000031,7.64e-14,33;CL:0000404,7.64e-14,33;CL:0000393,2.61e-10,39;CL:0000211,2.61e-10,39;CL:0002319,1.49e-08,43;CL:0000221,3.59e-08,44;CL:0000133,3.59e-08,44;CL:0002609,7.31e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.07e-13!75;UBERON:0001016!5.07e-13!75;UBERON:0001017!9.78e-13!73;UBERON:0005743!9.78e-13!73;UBERON:0002020!1.06e-12!34;UBERON:0001049!6.33e-11!52;UBERON:0005068!6.33e-11!52;UBERON:0006241!6.33e-11!52;UBERON:0007135!6.33e-11!52;UBERON:0002346!7.66e-11!71;UBERON:0003075!7.66e-11!71;UBERON:0007284!7.66e-11!71;UBERON:0004121!2.01e-10!102;UBERON:0000924!2.01e-10!102;UBERON:0006601!2.01e-10!102;UBERON:0003056!3.50e-10!49;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003080!2.11e-09!40;UBERON:0002780!4.23e-09!39;UBERON:0001890!4.23e-09!39;UBERON:0006240!4.23e-09!39;UBERON:0000033!9.64e-09!63;UBERON:0000955!2.44e-08!50;UBERON:0006238!2.44e-08!50;UBERON:0002616!3.40e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.50e-14,34;UBERON:0002346,6.51e-13,64;UBERON:0003075,6.51e-13,64;UBERON:0007284,6.51e-13,64;UBERON:0000073,1.11e-11,54;UBERON:0001017,3.00e-11,73;UBERON:0001049,7.25e-11,52;UBERON:0005068,7.25e-11,52;UBERON:0006241,7.25e-11,52;UBERON:0007135,7.25e-11,52;UBERON:0003056,1.15e-10,49;UBERON:0001016,1.36e-10,75;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0010371,9.89e-10,73;UBERON:0004121,2.93e-09,95;UBERON:0000924,2.93e-09,95;UBERON:0006601,2.93e-09,95;UBERON:0003080,4.82e-09,40;UBERON:0002780,1.21e-08,39;UBERON:0001890,1.21e-08,39;UBERON:0006240,1.21e-08,39;UBERON:0002616,5.88e-08,46;UBERON:0000955,1.30e-07,47;UBERON:0006238,1.30e-07,47;UBERON:0000956,4.18e-07,21;UBERON:0001869,4.18e-07,21;UBERON:0000203,4.18e-07,21|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,2.18243053485457,1.16806320297763,0.129123323441576,0.563154888606667,1.40438715793196,0,0,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0,6.97354979238772,0.0992909512008853,0,0.159992422793407,0,0,1.7230479846363,0.646413698057667,0,0,0.221730510655305,3.17515336729816,2.46025915033828,15.8481681015439,1.73310971850765,0.498703936075477,1.22501613757421,0.418531630736908,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0.194429899074283,0.419959264876088,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,13.7575193384526,23.2756030879694,17.1134478946668,0.677689064138264,0,0,0,0.7104801149461,0,0.384218305321555,5.39185984004084,7.69533848490637,5.67877395648731,8.2838785477103,5.74258206474195,11.1466627285608,10.2554653989513,11.0306254393203,0,1.53224805702225,1.99688493233117,14.3756053625911,17.4741399280602,13.022834263919,0.837548997004143,2.25105044012672,1.83357897332172,9.42811473515737,10.5355043791336,16.2167517868012,0.757261933331841,0.982430281388212,0.869593466105033,0,0,0,0,0,0.983110940922263,3.06774580640504,2.07828803682295,1.06001872353102,0.281686839553361,2.56652954828636,0,7.11066703153331,2.16491041011214,0.760079596425296,2.52762222507392,0.5709193985953,0,0,0.173485326766136,0.913396434936424,0,1.05505848386836,0.117588707135705,0.251333182659351,0.741584903203122,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0.254140454146129,1.79748767285787,0.915001205637253,12.4397808591736,1.21677024134594,1.53429274398198,1.45451631191692,2.27137768294861,0,0.124406970610093,0,0,0.390361328888111,3.67843367093557,3.06105620669094,3.61691562805716,1.90502197623718,1.15302348256365,1.78033276663485,0,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0,0.146199987425332,0,0,0.210289948564127,13.9950272835827,0.330418782983798,0,0.639864751605702,0.464473343720877,1.54640953586512,0.605050573870028,0.667134131534611,0.951128130562796,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.685491075658373,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.136948470622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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74356 | |||
|HGNC= | |||
|MCL_coexpression_id=335 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=81bp_to_uc009ncf.1_5end | |||
|cluster_id=chr8:107812968..107812983,- | |||
|description=CAGE_peak_2_at_4931428F04Rik_5end | |||
|id=chr8:107812968..107812983,- | |||
|ontology_enrichment_celltype=CL:0000540!1.73e-12!33;CL:0000047!1.73e-12!33;CL:0000031!1.73e-12!33;CL:0000404!1.73e-12!33;CL:0000117!3.36e-12!23;CL:0000337!3.36e-12!23;CL:0000393!2.55e-10!39;CL:0000211!2.55e-10!39;CL:0002319!8.16e-09!43;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002321!7.11e-08!70;CL:0000220!7.11e-08!70;CL:0000055!4.79e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.69e-17,23;CL:0000337,8.69e-17,23;CL:0000540,7.64e-14,33;CL:0000047,7.64e-14,33;CL:0000031,7.64e-14,33;CL:0000404,7.64e-14,33;CL:0000393,2.61e-10,39;CL:0000211,2.61e-10,39;CL:0002319,1.49e-08,43;CL:0000221,3.59e-08,44;CL:0000133,3.59e-08,44;CL:0002609,7.31e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.07e-13!75;UBERON:0001016!5.07e-13!75;UBERON:0001017!9.78e-13!73;UBERON:0005743!9.78e-13!73;UBERON:0002020!1.06e-12!34;UBERON:0001049!6.33e-11!52;UBERON:0005068!6.33e-11!52;UBERON:0006241!6.33e-11!52;UBERON:0007135!6.33e-11!52;UBERON:0002346!7.66e-11!71;UBERON:0003075!7.66e-11!71;UBERON:0007284!7.66e-11!71;UBERON:0004121!2.01e-10!102;UBERON:0000924!2.01e-10!102;UBERON:0006601!2.01e-10!102;UBERON:0003056!3.50e-10!49;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003080!2.11e-09!40;UBERON:0002780!4.23e-09!39;UBERON:0001890!4.23e-09!39;UBERON:0006240!4.23e-09!39;UBERON:0000033!9.64e-09!63;UBERON:0000955!2.44e-08!50;UBERON:0006238!2.44e-08!50;UBERON:0002616!3.40e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.50e-14,34;UBERON:0002346,6.51e-13,64;UBERON:0003075,6.51e-13,64;UBERON:0007284,6.51e-13,64;UBERON:0000073,1.11e-11,54;UBERON:0001017,3.00e-11,73;UBERON:0001049,7.25e-11,52;UBERON:0005068,7.25e-11,52;UBERON:0006241,7.25e-11,52;UBERON:0007135,7.25e-11,52;UBERON:0003056,1.15e-10,49;UBERON:0001016,1.36e-10,75;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0010371,9.89e-10,73;UBERON:0004121,2.93e-09,95;UBERON:0000924,2.93e-09,95;UBERON:0006601,2.93e-09,95;UBERON:0003080,4.82e-09,40;UBERON:0002780,1.21e-08,39;UBERON:0001890,1.21e-08,39;UBERON:0006240,1.21e-08,39;UBERON:0002616,5.88e-08,46;UBERON:0000955,1.30e-07,47;UBERON:0006238,1.30e-07,47;UBERON:0000956,4.18e-07,21;UBERON:0001869,4.18e-07,21;UBERON:0000203,4.18e-07,21 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,2.18243053485457,1.16806320297763,0.129123323441576,0.563154888606667,1.40438715793196,0,0,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0,6.97354979238772,0.0992909512008853,0,0.159992422793407,0,0,1.7230479846363,0.646413698057667,0,0,0.221730510655305,3.17515336729816,2.46025915033828,15.8481681015439,1.73310971850765,0.498703936075477,1.22501613757421,0.418531630736908,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0.194429899074283,0.419959264876088,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,13.7575193384526,23.2756030879694,17.1134478946668,0.677689064138264,0,0,0,0.7104801149461,0,0.384218305321555,5.39185984004084,7.69533848490637,5.67877395648731,8.2838785477103,5.74258206474195,11.1466627285608,10.2554653989513,11.0306254393203,0,1.53224805702225,1.99688493233117,14.3756053625911,17.4741399280602,13.022834263919,0.837548997004143,2.25105044012672,1.83357897332172,9.42811473515737,10.5355043791336,16.2167517868012,0.757261933331841,0.982430281388212,0.869593466105033,0,0,0,0,0,0.983110940922263,3.06774580640504,2.07828803682295,1.06001872353102,0.281686839553361,2.56652954828636,0,7.11066703153331,2.16491041011214,0.760079596425296,2.52762222507392,0.5709193985953,0,0,0.173485326766136,0.913396434936424,0,1.05505848386836,0.117588707135705,0.251333182659351,0.741584903203122,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0.254140454146129,1.79748767285787,0.915001205637253,12.4397808591736,1.21677024134594,1.53429274398198,1.45451631191692,2.27137768294861,0,0.124406970610093,0,0,0.390361328888111,3.67843367093557,3.06105620669094,3.61691562805716,1.90502197623718,1.15302348256365,1.78033276663485,0,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0,0.146199987425332,0,0,0.210289948564127,13.9950272835827,0.330418782983798,0,0.639864751605702,0.464473343720877,1.54640953586512,0.605050573870028,0.667134131534611,0.951128130562796,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.685491075658373,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0.491804836130026,0,0.631016438832513,1.95219372148319,1.07711698866399,0.238968797952552,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,0.790575555893047,0.963963949265421,0,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,1.42695054081656,1.64549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.49465875882444,0,0.844380948994182,0.119372344003136,0,0,0.927126510052548,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.849892149969277,0.69975726161829,0.276399947608848,1.90934123603023,1.10717597753397,1.21991680276109,0.972048067396211,0.836353184057875,0.655087691238533,0.539457385539283,0.165306911450672,0.26175594198403,0,0,27.6209539955253,0.149516546043979,0,0,0,0,0.117357238645754,0.39061315453185,0.419437377702843,0.241584120826006,14.1134703066354,0.316011120628178,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.680191150845634,0,0.0897138566094757,1.00730769818447,0,0,0.183151624267265,0.428736758158132,0,3.95326289831947,3.68260189205742,2.29158205375759,2.749650917499,0.685082519770642,0.755393897389701,2.02506750069542,3.15224842256954,0.453142408984205,1.03552062350364,2.80225838477277,2.39414924040619,3.41467211508268,3.64660075602441,1.88651846365184,2.75765262675021,3.33370091702423,3.09052585858341,3.20919209591815,3.28506375292937,1.2673964994512,2.82939512079114,2.71560371662659,1.53660365771686,2.41228969613576,4.28664322154766,2.43357084484197,2.70072908649187,3.29668720642645,1.91358596174717,1.71434626192708,1.4198064492747,1.66905332963125,1.74415699958794,3.10560955370591,1.94613598150856,1.82927972872773,2.36762740294059,2.44447404922551,2.80571135828869,2.13543032623513,1.37906275325789,0.818462086339379,1.70430525304563,1.35034627686799,5.9954538705107,2.10538447600868,1.50409737833809,1.3390183244819,0.441182838239031,0.231867835620421 | |||
|short_description=p2@4931428F04Rik | |||
}} |
Revision as of 19:39, 5 August 2015
Short description: | p2@4931428F04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4931428F04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 81bp_to_uc009ncf.1_5end |
EntrezGene: | 74356 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.69e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.69e-17 | 23 |
neuron | 7.64e-14 | 33 |
neuronal stem cell | 7.64e-14 | 33 |
neuroblast | 7.64e-14 | 33 |
electrically signaling cell | 7.64e-14 | 33 |
electrically responsive cell | 2.61e-10 | 39 |
electrically active cell | 2.61e-10 | 39 |
neural cell | 1.49e-08 | 43 |
ectodermal cell | 3.59e-08 | 44 |
neurectodermal cell | 3.59e-08 | 44 |
neuron of cerebral cortex | 7.31e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.50e-14 | 34 |
neurectoderm | 6.51e-13 | 64 |
neural plate | 6.51e-13 | 64 |
presumptive neural plate | 6.51e-13 | 64 |
regional part of nervous system | 1.11e-11 | 54 |
central nervous system | 3.00e-11 | 73 |
neural tube | 7.25e-11 | 52 |
neural rod | 7.25e-11 | 52 |
future spinal cord | 7.25e-11 | 52 |
neural keel | 7.25e-11 | 52 |
pre-chordal neural plate | 1.15e-10 | 49 |
nervous system | 1.36e-10 | 75 |
brain grey matter | 4.22e-10 | 29 |
regional part of telencephalon | 4.22e-10 | 29 |
telencephalon | 4.22e-10 | 29 |
ecto-epithelium | 9.89e-10 | 73 |
ectoderm-derived structure | 2.93e-09 | 95 |
ectoderm | 2.93e-09 | 95 |
presumptive ectoderm | 2.93e-09 | 95 |
anterior neural tube | 4.82e-09 | 40 |
regional part of forebrain | 1.21e-08 | 39 |
forebrain | 1.21e-08 | 39 |
future forebrain | 1.21e-08 | 39 |
regional part of brain | 5.88e-08 | 46 |
brain | 1.30e-07 | 47 |
future brain | 1.30e-07 | 47 |
cerebral cortex | 4.18e-07 | 21 |
cerebral hemisphere | 4.18e-07 | 21 |
pallium | 4.18e-07 | 21 |