FFCP PHASE1:Mm9::chr8:122159367..122159378,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66733|HGNC=|MCL_coexpression_id=121|UniProt=Q80XM3|association_with_transcript=-121bp_to_ENSMUST00000164382_5end|description=CAGE_peak_4_at_Kcng4_5end|id=chr8:122159367..122159378,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,4.00e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!7.57e-10!14;UBERON:0000991!7.73e-10!18;UBERON:0005564!7.73e-10!18;UBERON:0003101!8.63e-10!16;UBERON:0000079!8.63e-10!16;UBERON:0005156!3.74e-09!26;UBERON:0000990!3.74e-09!26;UBERON:0004176!4.25e-09!17;UBERON:0009196!4.25e-09!17;UBERON:0009117!4.25e-09!17;UBERON:0003135!5.48e-09!15;UBERON:0003133!1.38e-07!24;UBERON:0002323!5.52e-07!37;UBERON:0004458!5.52e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.00e-15,3;UBERON:0002275,4.00e-15,3;UBERON:0004733,2.86e-14,6;UBERON:0004732,2.86e-14,6;UBERON:0002028,2.86e-14,6;UBERON:0007277,2.86e-14,6;UBERON:0001896,1.94e-11,2;UBERON:0002298,1.94e-11,2;UBERON:0005290,1.94e-11,2;UBERON:0010096,1.94e-11,2;UBERON:0003076,6.67e-11,12;UBERON:0003057,6.67e-11,12;UBERON:0000073,1.10e-09,54;UBERON:0001017,3.36e-08,73;UBERON:0001016,6.23e-08,75;UBERON:0001049,8.54e-07,52;UBERON:0005068,8.54e-07,52;UBERON:0006241,8.54e-07,52;UBERON:0007135,8.54e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,2.17068474744819,1.53606533256243,0,0.0914876436024097,0,3.62937898701795,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.441683036920787,0,0,6.44117753425404,8.3778682725382,0,0,0,0,1.64769703345305,0.915001205637253,0,0.695297280769106,0.255715457330331,3.1168206683934,1.1356888414743,0.101839363850316,0.497627882440372,0,0,0,0.459804208866946,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,5.27452589664914,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,8.90041449650446,0.170870880797853,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.436725127492355,0,0.0826534557253359,0.785267825952089,0.259229946583586,0,0.56369293868419,0.299033092087958,0.66183396182839,0.972255941720238,0.516639293910924,0.675824501963113,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0|short_description=p4@Kcng4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66733 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XM3 | |||
|association_with_transcript=-121bp_to_ENSMUST00000164382_5end | |||
|cluster_id=chr8:122159367..122159378,- | |||
|description=CAGE_peak_4_at_Kcng4_5end | |||
|id=chr8:122159367..122159378,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.00e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!7.57e-10!14;UBERON:0000991!7.73e-10!18;UBERON:0005564!7.73e-10!18;UBERON:0003101!8.63e-10!16;UBERON:0000079!8.63e-10!16;UBERON:0005156!3.74e-09!26;UBERON:0000990!3.74e-09!26;UBERON:0004176!4.25e-09!17;UBERON:0009196!4.25e-09!17;UBERON:0009117!4.25e-09!17;UBERON:0003135!5.48e-09!15;UBERON:0003133!1.38e-07!24;UBERON:0002323!5.52e-07!37;UBERON:0004458!5.52e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.00e-15,3;UBERON:0002275,4.00e-15,3;UBERON:0004733,2.86e-14,6;UBERON:0004732,2.86e-14,6;UBERON:0002028,2.86e-14,6;UBERON:0007277,2.86e-14,6;UBERON:0001896,1.94e-11,2;UBERON:0002298,1.94e-11,2;UBERON:0005290,1.94e-11,2;UBERON:0010096,1.94e-11,2;UBERON:0003076,6.67e-11,12;UBERON:0003057,6.67e-11,12;UBERON:0000073,1.10e-09,54;UBERON:0001017,3.36e-08,73;UBERON:0001016,6.23e-08,75;UBERON:0001049,8.54e-07,52;UBERON:0005068,8.54e-07,52;UBERON:0006241,8.54e-07,52;UBERON:0007135,8.54e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,2.17068474744819,1.53606533256243,0,0.0914876436024097,0,3.62937898701795,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.441683036920787,0,0,6.44117753425404,8.3778682725382,0,0,0,0,1.64769703345305,0.915001205637253,0,0.695297280769106,0.255715457330331,3.1168206683934,1.1356888414743,0.101839363850316,0.497627882440372,0,0,0,0.459804208866946,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,5.27452589664914,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,8.90041449650446,0.170870880797853,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.436725127492355,0,0.0826534557253359,0.785267825952089,0.259229946583586,0,0.56369293868419,0.299033092087958,0.66183396182839,0.972255941720238,0.516639293910924,0.675824501963113,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0 | |||
|short_description=p4@Kcng4 | |||
}} |
Revision as of 00:51, 6 August 2015
Short description: | p4@Kcng4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcng4_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -121bp_to_ENSMUST00000164382_5end |
EntrezGene: | 66733 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.00e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.00e-15 | 3 |
reticular formation | 4.00e-15 | 3 |
segmental subdivision of hindbrain | 2.86e-14 | 6 |
segmental subdivision of nervous system | 2.86e-14 | 6 |
hindbrain | 2.86e-14 | 6 |
presumptive hindbrain | 2.86e-14 | 6 |
medulla oblongata | 1.94e-11 | 2 |
brainstem | 1.94e-11 | 2 |
myelencephalon | 1.94e-11 | 2 |
future myelencephalon | 1.94e-11 | 2 |
posterior neural tube | 6.67e-11 | 12 |
chordal neural plate | 6.67e-11 | 12 |
regional part of nervous system | 1.10e-09 | 54 |
central nervous system | 3.36e-08 | 73 |
nervous system | 6.23e-08 | 75 |
neural tube | 8.54e-07 | 52 |
neural rod | 8.54e-07 | 52 |
future spinal cord | 8.54e-07 | 52 |
neural keel | 8.54e-07 | 52 |