FFCP PHASE1:Mm9::chr9:106356265..106356276,+: Difference between revisions
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{{FFCP|EntrezGene=59092|HGNC=|MCL_coexpression_id=1773|UniProt=P57724,Q8BP63|association_with_transcript=77bp_to_ENSMUST00000024260,uc009rjt.2_5end|description=CAGE_peak_4_at_Pcbp4_5end|id=chr9:106356265..106356276,+|ontology_enrichment_celltype=CL:0000221!1.84e-26!44;CL:0000133!1.84e-26!44;CL:0002319!9.79e-26!43;CL:0000055!2.74e-22!50;CL:0000540!4.45e-19!33;CL:0000047!4.45e-19!33;CL:0000031!4.45e-19!33;CL:0000404!4.45e-19!33;CL:0000393!6.09e-17!39;CL:0000211!6.09e-17!39;CL:0000117!4.83e-14!23;CL:0000337!4.83e-14!23;CL:0002321!7.86e-12!70;CL:0000220!7.86e-12!70;CL:0000333!1.98e-07!10;CL:0000095!1.98e-07!10;CL:0000243!1.98e-07!10;CL:0000123!1.98e-07!10;CL:0000125!1.98e-07!10;CL:0000030!1.98e-07!10;CL:0000339!1.98e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,2.70e-33,44;CL:0000133,2.70e-33,44;CL:0002319,2.28e-32,43;CL:0000540,7.14e-24,33;CL:0000047,7.14e-24,33;CL:0000031,7.14e-24,33;CL:0000404,7.14e-24,33;CL:0000393,1.08e-18,39;CL:0000211,1.08e-18,39;CL:0000117,1.88e-17,23;CL:0000337,1.88e-17,23;CL:0002321,1.64e-15,70;CL:0000333,4.89e-09,10;CL:0000095,4.89e-09,10;CL:0000243,4.89e-09,10;CL:0000123,4.89e-09,10;CL:0000125,4.89e-09,10;CL:0000030,4.89e-09,10;CL:0000339,4.89e-09,10;CL:0002453,2.61e-07,8;CL:0000107,9.30e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.91e-28!75;UBERON:0001016!6.91e-28!75;UBERON:0001017!2.43e-26!73;UBERON:0005743!2.43e-26!73;UBERON:0004121!3.38e-25!102;UBERON:0000924!3.38e-25!102;UBERON:0006601!3.38e-25!102;UBERON:0002346!1.28e-17!71;UBERON:0003075!1.28e-17!71;UBERON:0007284!1.28e-17!71;UBERON:0000033!9.08e-17!63;UBERON:0001049!6.09e-15!52;UBERON:0005068!6.09e-15!52;UBERON:0006241!6.09e-15!52;UBERON:0007135!6.09e-15!52;UBERON:0003056!4.67e-14!49;UBERON:0002616!8.60e-14!49;UBERON:0000955!2.13e-13!50;UBERON:0006238!2.13e-13!50;UBERON:0002020!3.28e-12!34;UBERON:0003080!7.58e-11!40;UBERON:0002780!1.44e-10!39;UBERON:0001890!1.44e-10!39;UBERON:0006240!1.44e-10!39;UBERON:0002791!5.11e-10!29;UBERON:0003528!5.11e-10!29;UBERON:0001893!5.11e-10!29;UBERON:0000153!2.40e-07!94;UBERON:0000010!5.70e-07!11;UBERON:0007811!6.66e-07!86;UBERON:0000025!6.67e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-30,75;UBERON:0004121,6.69e-30,95;UBERON:0000924,6.69e-30,95;UBERON:0006601,6.69e-30,95;UBERON:0001017,1.68e-28,73;UBERON:0010314,5.66e-21,92;UBERON:0002346,9.18e-21,64;UBERON:0003075,9.18e-21,64;UBERON:0007284,9.18e-21,64;UBERON:0010371,9.29e-19,73;UBERON:0000073,2.79e-16,54;UBERON:0001049,6.23e-15,52;UBERON:0005068,6.23e-15,52;UBERON:0006241,6.23e-15,52;UBERON:0007135,6.23e-15,52;UBERON:0003056,5.36e-14,49;UBERON:0002020,7.48e-13,34;UBERON:0002616,7.78e-12,46;UBERON:0000955,2.65e-11,47;UBERON:0006238,2.65e-11,47;UBERON:0003080,2.38e-10,40;UBERON:0003528,3.58e-10,29;UBERON:0002791,3.58e-10,29;UBERON:0001893,3.58e-10,29;UBERON:0002780,5.19e-10,39;UBERON:0001890,5.19e-10,39;UBERON:0006240,5.19e-10,39;UBERON:0000010,1.87e-08,11;UBERON:0002410,9.30e-07,9|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0.550640256485045,1.56478268869608,15.4797861030117,9.44650585758229,8.74934545834275,5.45947044338914,10.062679505548,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,9.1042407386819,9.52183762689659,9.50747105259269,3.04960078862219,3.55717918444456,0.449949858640699,0,0,6.89080254192331,16.1371688235053,6.84351441235953,7.02030879324791,6.94072372459561,5.42736870367227,4.8591079009355,8.08439274818697,8.81778333367775,9.19218786610021,4.40463523997555,4.72443150915195,3.22573719838111,5.53922408466814,6.86157327018072,7.8137005583514,5.02529398202486,3.37657566019008,3.66715794664344,3.53554302568401,2.84743361598206,2.05039390407831,16.3568577599678,9.06858721281426,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.519572009205738,0,8.30976176682415,2.56652954828636,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,2.09706895166752,1.83000241127451,3.01570445070875,0.869121600961382,0.511430914660661,0.83115217823824,3.0825839982874,1.01839363850316,0.248813941220186,0,0.420883711772948,2.86264974517948,5.28774840196988,3.78130472591233,3.31550599238573,4.62648194229029,4.61209393025459,3.84177070694888,1.81092359517311,1.72454394346274,1.51284864134255,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,3.72826390563903,2.81431271977315,2.70093092191522,1.89395788468168,0.787056926989615,1.07986979021165,2.32533944750408,4.29237442239391,2.21854150497622,1.97471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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59092 | |||
|HGNC= | |||
|MCL_coexpression_id=1773 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P57724,uniprot:Q8BP63 | |||
|association_with_transcript=77bp_to_ENSMUST00000024260,uc009rjt.2_5end | |||
|cluster_id=chr9:106356265..106356276,+ | |||
|description=CAGE_peak_4_at_Pcbp4_5end | |||
|id=chr9:106356265..106356276,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.84e-26!44;CL:0000133!1.84e-26!44;CL:0002319!9.79e-26!43;CL:0000055!2.74e-22!50;CL:0000540!4.45e-19!33;CL:0000047!4.45e-19!33;CL:0000031!4.45e-19!33;CL:0000404!4.45e-19!33;CL:0000393!6.09e-17!39;CL:0000211!6.09e-17!39;CL:0000117!4.83e-14!23;CL:0000337!4.83e-14!23;CL:0002321!7.86e-12!70;CL:0000220!7.86e-12!70;CL:0000333!1.98e-07!10;CL:0000095!1.98e-07!10;CL:0000243!1.98e-07!10;CL:0000123!1.98e-07!10;CL:0000125!1.98e-07!10;CL:0000030!1.98e-07!10;CL:0000339!1.98e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.70e-33,44;CL:0000133,2.70e-33,44;CL:0002319,2.28e-32,43;CL:0000540,7.14e-24,33;CL:0000047,7.14e-24,33;CL:0000031,7.14e-24,33;CL:0000404,7.14e-24,33;CL:0000393,1.08e-18,39;CL:0000211,1.08e-18,39;CL:0000117,1.88e-17,23;CL:0000337,1.88e-17,23;CL:0002321,1.64e-15,70;CL:0000333,4.89e-09,10;CL:0000095,4.89e-09,10;CL:0000243,4.89e-09,10;CL:0000123,4.89e-09,10;CL:0000125,4.89e-09,10;CL:0000030,4.89e-09,10;CL:0000339,4.89e-09,10;CL:0002453,2.61e-07,8;CL:0000107,9.30e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.91e-28!75;UBERON:0001016!6.91e-28!75;UBERON:0001017!2.43e-26!73;UBERON:0005743!2.43e-26!73;UBERON:0004121!3.38e-25!102;UBERON:0000924!3.38e-25!102;UBERON:0006601!3.38e-25!102;UBERON:0002346!1.28e-17!71;UBERON:0003075!1.28e-17!71;UBERON:0007284!1.28e-17!71;UBERON:0000033!9.08e-17!63;UBERON:0001049!6.09e-15!52;UBERON:0005068!6.09e-15!52;UBERON:0006241!6.09e-15!52;UBERON:0007135!6.09e-15!52;UBERON:0003056!4.67e-14!49;UBERON:0002616!8.60e-14!49;UBERON:0000955!2.13e-13!50;UBERON:0006238!2.13e-13!50;UBERON:0002020!3.28e-12!34;UBERON:0003080!7.58e-11!40;UBERON:0002780!1.44e-10!39;UBERON:0001890!1.44e-10!39;UBERON:0006240!1.44e-10!39;UBERON:0002791!5.11e-10!29;UBERON:0003528!5.11e-10!29;UBERON:0001893!5.11e-10!29;UBERON:0000153!2.40e-07!94;UBERON:0000010!5.70e-07!11;UBERON:0007811!6.66e-07!86;UBERON:0000025!6.67e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-30,75;UBERON:0004121,6.69e-30,95;UBERON:0000924,6.69e-30,95;UBERON:0006601,6.69e-30,95;UBERON:0001017,1.68e-28,73;UBERON:0010314,5.66e-21,92;UBERON:0002346,9.18e-21,64;UBERON:0003075,9.18e-21,64;UBERON:0007284,9.18e-21,64;UBERON:0010371,9.29e-19,73;UBERON:0000073,2.79e-16,54;UBERON:0001049,6.23e-15,52;UBERON:0005068,6.23e-15,52;UBERON:0006241,6.23e-15,52;UBERON:0007135,6.23e-15,52;UBERON:0003056,5.36e-14,49;UBERON:0002020,7.48e-13,34;UBERON:0002616,7.78e-12,46;UBERON:0000955,2.65e-11,47;UBERON:0006238,2.65e-11,47;UBERON:0003080,2.38e-10,40;UBERON:0003528,3.58e-10,29;UBERON:0002791,3.58e-10,29;UBERON:0001893,3.58e-10,29;UBERON:0002780,5.19e-10,39;UBERON:0001890,5.19e-10,39;UBERON:0006240,5.19e-10,39;UBERON:0000010,1.87e-08,11;UBERON:0002410,9.30e-07,9 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0.550640256485045,1.56478268869608,15.4797861030117,9.44650585758229,8.74934545834275,5.45947044338914,10.062679505548,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,9.1042407386819,9.52183762689659,9.50747105259269,3.04960078862219,3.55717918444456,0.449949858640699,0,0,6.89080254192331,16.1371688235053,6.84351441235953,7.02030879324791,6.94072372459561,5.42736870367227,4.8591079009355,8.08439274818697,8.81778333367775,9.19218786610021,4.40463523997555,4.72443150915195,3.22573719838111,5.53922408466814,6.86157327018072,7.8137005583514,5.02529398202486,3.37657566019008,3.66715794664344,3.53554302568401,2.84743361598206,2.05039390407831,16.3568577599678,9.06858721281426,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.519572009205738,0,8.30976176682415,2.56652954828636,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,2.09706895166752,1.83000241127451,3.01570445070875,0.869121600961382,0.511430914660661,0.83115217823824,3.0825839982874,1.01839363850316,0.248813941220186,0,0.420883711772948,2.86264974517948,5.28774840196988,3.78130472591233,3.31550599238573,4.62648194229029,4.61209393025459,3.84177070694888,1.81092359517311,1.72454394346274,1.51284864134255,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,3.72826390563903,2.81431271977315,2.70093092191522,1.89395788468168,0.787056926989615,1.07986979021165,2.32533944750408,4.29237442239391,2.21854150497622,1.97471819896177,2.13417703302824,2.26992666728396,1.16959989940266,1.09775057645525,2.41571553768669,1.47202963994889,2.77842453424068,0,0.264450566663544,2.55945900642281,0.232236671860439,1.54640953586512,0,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,1.89667900953082,1.25673363870702,2.25415471346161,0.407302655690628,0.775809948670503,1.05203729835478,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,2.84237117655727,2.28150967018836,1.01847051465113,0,1.34005005953453,0.238043640886014,0.585400943573396,0.315270288212382,1.10732344824387,0.956728611944923,0,0.690739927463582,0.289298117163023,0,0,0,0,3.37156238974363,1.87538698547525,0.983609672260053,1.26235463602186,4.10160685241134,3.12350995437311,4.52389135238878,5.9742199488138,7.5751549188014,4.24614796183249,2.83367491172426,2.92255857911312,3.16230222357219,0.321321316421807,0.141940085208269,0.890328018336276,1.46598263418218,0.329940245945071,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0,1.05418608574999,0,0,3.24109969256358,3.62204314591713,1.28602221018955,0.532020700926821,1.96205699362278,0.987294123612726,1.8267896946876,0.23467170806371,0,0.220528398054962,0.49465875882444,1.29171541356724,0.542816324353403,0.716234064018819,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.432021363287205,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,0.518459893167171,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.616265742988964,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.665957860122194,1.88399098879899,0.335769232728157,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,1.6942555278512,0.460325236507177,2.86447756719698,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,2.5888015587591,3.32119512269365,1.99512436700516,2.21953687480374,0.972426868273176,1.67690530102386,1.65459157605013,1.77797382241292,0.618105171716683,1.92551525755089,1.51618327058278,1.01391719956096,1.32038438970253,1.40462261204824,1.53660365771686,1.32101578597911,1.42888107384922,1.97003354106254,1.54327376370964,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,0.953744759789284,0.581385666529314,1.2234219453993,1.35383372626682,0.914639864363863,1.57841826862706,1.22223702461276,0.561142271657738,0.593175090620871,1.57607171800902,1.22769312950907,2.47898945897546,1.15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| |||
|short_description=p4@Pcbp4 | |||
}} |
Revision as of 12:08, 4 August 2015
Short description: | p4@Pcbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pcbp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1773 |
Association with transcript: | 77bp_to_ENSMUST00000024260, uc009rjt.2_5end |
EntrezGene: | 59092 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.70e-33 | 44 |
neurectodermal cell | 2.70e-33 | 44 |
neural cell | 2.28e-32 | 43 |
neuron | 7.14e-24 | 33 |
neuronal stem cell | 7.14e-24 | 33 |
neuroblast | 7.14e-24 | 33 |
electrically signaling cell | 7.14e-24 | 33 |
electrically responsive cell | 1.08e-18 | 39 |
electrically active cell | 1.08e-18 | 39 |
CNS neuron (sensu Vertebrata) | 1.88e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-17 | 23 |
embryonic cell | 1.64e-15 | 70 |
migratory neural crest cell | 4.89e-09 | 10 |
neuron associated cell | 4.89e-09 | 10 |
glial cell (sensu Vertebrata) | 4.89e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 4.89e-09 | 10 |
glial cell | 4.89e-09 | 10 |
glioblast | 4.89e-09 | 10 |
glioblast (sensu Vertebrata) | 4.89e-09 | 10 |
oligodendrocyte precursor cell | 2.61e-07 | 8 |
autonomic neuron | 9.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.25e-30 | 75 |
ectoderm-derived structure | 6.69e-30 | 95 |
ectoderm | 6.69e-30 | 95 |
presumptive ectoderm | 6.69e-30 | 95 |
central nervous system | 1.68e-28 | 73 |
structure with developmental contribution from neural crest | 5.66e-21 | 92 |
neurectoderm | 9.18e-21 | 64 |
neural plate | 9.18e-21 | 64 |
presumptive neural plate | 9.18e-21 | 64 |
ecto-epithelium | 9.29e-19 | 73 |
regional part of nervous system | 2.79e-16 | 54 |
neural tube | 6.23e-15 | 52 |
neural rod | 6.23e-15 | 52 |
future spinal cord | 6.23e-15 | 52 |
neural keel | 6.23e-15 | 52 |
pre-chordal neural plate | 5.36e-14 | 49 |
gray matter | 7.48e-13 | 34 |
regional part of brain | 7.78e-12 | 46 |
brain | 2.65e-11 | 47 |
future brain | 2.65e-11 | 47 |
anterior neural tube | 2.38e-10 | 40 |
brain grey matter | 3.58e-10 | 29 |
regional part of telencephalon | 3.58e-10 | 29 |
telencephalon | 3.58e-10 | 29 |
regional part of forebrain | 5.19e-10 | 39 |
forebrain | 5.19e-10 | 39 |
future forebrain | 5.19e-10 | 39 |
peripheral nervous system | 1.87e-08 | 11 |
autonomic nervous system | 9.30e-07 | 9 |