FFCP PHASE2:Hg19::chr19:50354462..50354473,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:53635 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9632 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=53635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9632 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q86YD1 | ||
|association_with_transcript=46bp_to_ENST00000391842,NM_017432,uc002pqd.2,uc002pqe.1,uc002pqf.1_5end | |association_with_transcript=46bp_to_ENST00000391842,NM_017432,uc002pqd.2,uc002pqe.1,uc002pqf.1_5end | ||
|cluster_id=chr19:50354462..50354473,+ | |cluster_id=chr19:50354462..50354473,+ |
Latest revision as of 09:15, 19 September 2015
Short description: | p4@PTOV1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTOV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000391842, NM_017432, uc002pqd.2, uc002pqe.1, uc002pqf.1_5end |
EntrezGene: | PTOV1 |
HGNC: | 9632 |
UniProt: | Q86YD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@PTOV1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 3.54e-10 | 121 |
electrically responsive cell | 1.08e-09 | 61 |
electrically active cell | 1.08e-09 | 61 |
embryonic cell | 1.14e-09 | 250 |
smooth muscle cell | 9.79e-08 | 43 |
smooth muscle myoblast | 9.79e-08 | 43 |
muscle precursor cell | 1.36e-07 | 58 |
myoblast | 1.36e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-07 | 58 |
muscle cell | 1.67e-07 | 55 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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cell layer | 2.14e-29 | 309 |
epithelium | 6.54e-29 | 306 |
central nervous system | 2.75e-28 | 81 |
neurectoderm | 4.97e-28 | 86 |
nervous system | 3.08e-27 | 89 |
neural plate | 3.39e-27 | 82 |
presumptive neural plate | 3.39e-27 | 82 |
neural tube | 1.19e-24 | 56 |
neural rod | 1.19e-24 | 56 |
future spinal cord | 1.19e-24 | 56 |
Showing 1 to 10 of 85 entries