FFCP PHASE2:Mm9::chr11:51817722..51817813,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:213084 |HGNC= |MCL_coexpression_id=0 |TSSclassifier=NA |UniProt=uniprot:Q8BLF2,uniprot:E9QPG3,uniprot:B1AU43,unipro...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=213084 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8BLF2,E9QPG3,B1AU43,B1AU42,F2Z3Z6 | ||
|association_with_transcript=0bp_to_ENSMUST00000063303,ENSMUST00000063321,ENSMUST00000109074,ENSMUST00000109077,ENSMUST00000109078,ENSMUST00000109079,ENSMUST00000109080,ENSMUST00000109081,ENSMUST00000109082,ENSMUST00000120374,ENSMUST00000121591,ENSMUST00000135076,ENSMUST00000143228,NM_001166653,NM_001166654,NM_001166655,NM_001166656,NM_001166657,NM_153785,uc007iuu.2,uc007iuv.2,uc007iuw.2,uc007iux.2,uc007iuy.2,uc007iuz.2,uc011xul.1_5end | |association_with_transcript=0bp_to_ENSMUST00000063303,ENSMUST00000063321,ENSMUST00000109074,ENSMUST00000109077,ENSMUST00000109078,ENSMUST00000109079,ENSMUST00000109080,ENSMUST00000109081,ENSMUST00000109082,ENSMUST00000120374,ENSMUST00000121591,ENSMUST00000135076,ENSMUST00000143228,NM_001166653,NM_001166654,NM_001166655,NM_001166656,NM_001166657,NM_153785,uc007iuu.2,uc007iuv.2,uc007iuw.2,uc007iux.2,uc007iuy.2,uc007iuz.2,uc011xul.1_5end | ||
|cluster_id=chr11:51817722..51817813,+ | |cluster_id=chr11:51817722..51817813,+ | ||
Latest revision as of 15:42, 1 October 2015
| Short description: | p1@Cdkl3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cdkl3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 0bp_to_ENSMUST00000063303, ENSMUST00000063321, ENSMUST00000109074, ENSMUST00000109077, ENSMUST00000109078, ENSMUST00000109079, ENSMUST00000109080, ENSMUST00000109081, ENSMUST00000109082, ENSMUST00000120374, ENSMUST00000121591, ENSMUST00000135076, ENSMUST00000143228, NM_001166653, NM_001166654, NM_001166655, NM_001166656, NM_001166657, NM_153785, uc007iuu.2, uc007iuv.2, uc007iuw.2, uc007iux.2, uc007iuy.2, uc007iuz.2, uc011xul.1_5end |
| EntrezGene: | Cdkl3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.81e-11 | 23 |
| neuroblast (sensu Vertebrata) | 3.81e-11 | 23 |
| neuron | 3.67e-08 | 33 |
| neuronal stem cell | 3.67e-08 | 33 |
| neuroblast | 3.67e-08 | 33 |
| electrically signaling cell | 3.67e-08 | 33 |
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.36e-16 | 54 |
| neurectoderm | 4.87e-16 | 64 |
| neural plate | 4.87e-16 | 64 |
| presumptive neural plate | 4.87e-16 | 64 |
| neural tube | 5.13e-16 | 52 |
| neural rod | 5.13e-16 | 52 |
| future spinal cord | 5.13e-16 | 52 |
| neural keel | 5.13e-16 | 52 |
| ecto-epithelium | 8.82e-15 | 73 |
| central nervous system | 1.21e-14 | 73 |
| nervous system | 1.64e-14 | 75 |
| brain | 1.80e-13 | 47 |
| future brain | 1.80e-13 | 47 |
| ectoderm-derived structure | 2.93e-13 | 95 |
| ectoderm | 2.93e-13 | 95 |
| presumptive ectoderm | 2.93e-13 | 95 |
| pre-chordal neural plate | 3.49e-13 | 49 |
| regional part of brain | 6.37e-13 | 46 |
| gray matter | 1.86e-12 | 34 |
| anterior neural tube | 4.68e-12 | 40 |
| regional part of forebrain | 1.78e-11 | 39 |
| forebrain | 1.78e-11 | 39 |
| future forebrain | 1.78e-11 | 39 |
| brain grey matter | 5.86e-10 | 29 |
| regional part of telencephalon | 5.86e-10 | 29 |
| telencephalon | 5.86e-10 | 29 |
| structure with developmental contribution from neural crest | 1.95e-09 | 92 |
