FF:11684-122I1: Difference between revisions

Revision as of 21:43, 9 July 2012

Name:	Hepatocyte, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	liver
dev stage	NA
sex	NA
age	NA
cell type	hepatocyte
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	RNA1057
catalog number	SC5205
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.758
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.372
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0.758
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.206
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.202
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0922
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.69
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.202
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.26
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0.711
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.28
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.202
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.202
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.599
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.191
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.363
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0663
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0287
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.519
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.875
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.597
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.202
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	1.019
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.175
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12626

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.42
MA0003.1	MA0003.1	0.0224
MA0004.1	MA0004.1	0.797
MA0006.1	MA0006.1	0.248
MA0007.1	MA0007.1	0.00597
MA0009.1	MA0009.1	0.413
MA0014.1	MA0014.1	0.626
MA0017.1	MA0017.1	3.0979e-25
MA0018.2	MA0018.2	0.0177
MA0019.1	MA0019.1	0.792
MA0024.1	MA0024.1	0.0168
MA0025.1	MA0025.1	0.741
MA0027.1	MA0027.1	0.776
MA0028.1	MA0028.1	0.00341
MA0029.1	MA0029.1	0.756
MA0030.1	MA0030.1	0.0161
MA0031.1	MA0031.1	0.0607
MA0035.2	MA0035.2	0.014
MA0038.1	MA0038.1	0.497
MA0039.2	MA0039.2	0.482
MA0040.1	MA0040.1	0.62
MA0041.1	MA0041.1	0.894
MA0042.1	MA0042.1	0.751
MA0043.1	MA0043.1	0.355
MA0046.1	MA0046.1	1.327e-69
MA0047.2	MA0047.2	4.63124e-5
MA0048.1	MA0048.1	0.619
MA0050.1	MA0050.1	0.859
MA0051.1	MA0051.1	0.955
MA0052.1	MA0052.1	0.858
MA0055.1	MA0055.1	0.642
MA0057.1	MA0057.1	0.196
MA0058.1	MA0058.1	0.759
MA0059.1	MA0059.1	0.46
MA0060.1	MA0060.1	0.0262
MA0061.1	MA0061.1	0.0116
MA0062.2	MA0062.2	1.62359e-6
MA0065.2	MA0065.2	8.17741e-13
MA0066.1	MA0066.1	0.568
MA0067.1	MA0067.1	0.0191
MA0068.1	MA0068.1	0.0567
MA0069.1	MA0069.1	0.207
MA0070.1	MA0070.1	0.446
MA0071.1	MA0071.1	0.265
MA0072.1	MA0072.1	0.139
MA0073.1	MA0073.1	0.895
MA0074.1	MA0074.1	0.402
MA0076.1	MA0076.1	1.72196e-4
MA0077.1	MA0077.1	0.418
MA0078.1	MA0078.1	0.775
MA0079.2	MA0079.2	0.943
MA0080.2	MA0080.2	3.25646e-5
MA0081.1	MA0081.1	0.0277
MA0083.1	MA0083.1	0.149
MA0084.1	MA0084.1	0.903
MA0087.1	MA0087.1	0.342
MA0088.1	MA0088.1	0.362
MA0090.1	MA0090.1	0.876
MA0091.1	MA0091.1	0.911
MA0092.1	MA0092.1	0.525
MA0093.1	MA0093.1	0.776
MA0099.2	MA0099.2	5.93952e-18
MA0100.1	MA0100.1	0.154
MA0101.1	MA0101.1	6.46738e-4
MA0102.2	MA0102.2	0.286
MA0103.1	MA0103.1	0.0599
MA0104.2	MA0104.2	0.573
MA0105.1	MA0105.1	0.0597
MA0106.1	MA0106.1	0.71
MA0107.1	MA0107.1	5.05165e-4
MA0108.2	MA0108.2	0.0657
MA0111.1	MA0111.1	0.867
MA0112.2	MA0112.2	4.22876e-5
MA0113.1	MA0113.1	0.0588
MA0114.1	MA0114.1	1.22125e-28
MA0115.1	MA0115.1	4.20168e-8
MA0116.1	MA0116.1	0.00543
MA0117.1	MA0117.1	0.457
MA0119.1	MA0119.1	0.0514
MA0122.1	MA0122.1	0.861
MA0124.1	MA0124.1	0.98
MA0125.1	MA0125.1	0.397
MA0131.1	MA0131.1	0.334
MA0135.1	MA0135.1	0.846
MA0136.1	MA0136.1	1.15362e-4
MA0137.2	MA0137.2	0.00135
MA0138.2	MA0138.2	0.0654
MA0139.1	MA0139.1	0.809
MA0140.1	MA0140.1	0.564
MA0141.1	MA0141.1	2.24522e-4
MA0142.1	MA0142.1	0.199
MA0143.1	MA0143.1	0.311
MA0144.1	MA0144.1	0.00273
MA0145.1	MA0145.1	0.362
MA0146.1	MA0146.1	0.424
MA0147.1	MA0147.1	0.798
MA0148.1	MA0148.1	0.00266
MA0149.1	MA0149.1	0.801
MA0150.1	MA0150.1	0.0874
MA0152.1	MA0152.1	6.06755e-4
MA0153.1	MA0153.1	1.30752e-36
MA0154.1	MA0154.1	0.287
MA0155.1	MA0155.1	0.204
MA0156.1	MA0156.1	5.53798e-4
MA0157.1	MA0157.1	0.379
MA0159.1	MA0159.1	1.91505e-4
MA0160.1	MA0160.1	0.0147
MA0162.1	MA0162.1	0.919
MA0163.1	MA0163.1	0.311
MA0164.1	MA0164.1	0.472
MA0258.1	MA0258.1	0.00162
MA0259.1	MA0259.1	0.323

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12626

Novel motif	Logo	P-value
1	1	0.171
10	10	0.82
100	100	0.246
101	101	0.905
102	102	0.0634
103	103	0.319
104	104	0.505
105	105	0.43
106	106	0.00392
107	107	0.00587
108	108	0.251
109	109	0.902
11	11	0.403
110	110	0.577
111	111	0.307
112	112	0.0129
113	113	2.31647e-4
114	114	0.15
115	115	0.854
116	116	0.35
117	117	0.275
118	118	0.314
119	119	0.0079
12	12	0.57
120	120	0.688
121	121	0.903
122	122	0.221
123	123	0.796
124	124	0.0803
125	125	0.118
126	126	0.553
127	127	0.0896
128	128	0.16
129	129	0.727
13	13	0.0898
130	130	0.0127
131	131	0.981
132	132	0.0556
133	133	0.319
134	134	0.775
135	135	0.525
136	136	0.0894
137	137	0.299
138	138	0.29
139	139	0.962
14	14	0.631
140	140	0.537
141	141	0.136
142	142	0.273
143	143	0.00249
144	144	0.445
145	145	0.265
146	146	0.47
147	147	0.948
148	148	0.175
149	149	0.146
15	15	1
150	150	0.891
151	151	0.451
152	152	0.949
153	153	0.816
154	154	0.406
155	155	0.0485
156	156	0.708
157	157	0.469
158	158	0.311
159	159	0.0708
16	16	0.603
160	160	0.503
161	161	0.973
162	162	0.589
163	163	0.598
164	164	0.378
165	165	0.00189
166	166	0.283
167	167	0.492
168	168	0.63
169	169	0.001
17	17	0.447
18	18	0.639
19	19	0.00157
2	2	0.185
20	20	0.98
21	21	0.12
22	22	0.0783
23	23	0.0518
24	24	0.76
25	25	0.802
26	26	0.251
27	27	0.514
28	28	0.946
29	29	0.94
3	3	0.528
30	30	0.646
31	31	0.22
32	32	0.406
33	33	0.995
34	34	0.254
35	35	0.299
36	36	0.391
37	37	0.982
38	38	0.227
39	39	0.238
4	4	0.156
40	40	0.258
41	41	0.0829
42	42	0.977
43	43	0.253
44	44	0.00459
45	45	0.332
46	46	0.254
47	47	0.818
48	48	0.488
49	49	0.151
5	5	0.285
50	50	0.399
51	51	0.937
52	52	0.0419
53	53	0.846
54	54	0.509
55	55	0.829
56	56	0.891
57	57	0.968
58	58	0.253
59	59	0.215
6	6	0.619
60	60	0.0222
61	61	0.662
62	62	0.211
63	63	0.15
64	64	0.659
65	65	0.0753
66	66	0.0539
67	67	0.0742
68	68	0.936
69	69	0.99
7	7	0.101
70	70	0.98
71	71	0.265
72	72	0.662
73	73	0.962
74	74	0.888
75	75	0.565
76	76	0.329
77	77	0.0271
78	78	0.175
79	79	0.829
8	8	0.137
80	80	0.984
81	81	0.721
82	82	0.307
83	83	0.972
84	84	0.45
85	85	0.00756
86	86	0.763
87	87	0.0394
88	88	0.318
89	89	0.278
9	9	0.842
90	90	0.511
91	91	0.175
92	92	0.344
93	93	0.586
94	94	0.194
95	95	0.14
96	96	0.0451
97	97	0.92
98	98	0.957
99	99	0.0694

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12626

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000078 human hepatocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000182 (hepatocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000078 (human hepatocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!3.53!3358.64!SEBOX;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!2.81!643.96!SEBOX;;chr19:4153613..4153652,+!p1@CREB3L3!2.78!598.47!CREB3L3;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!2.49!305.44!SEBOX;;chr7:73038839..73038862,-!p1@MLXIPL!2.22!166.01!MLXIPL;;chr1:214161272..214161322,+!p1@PROX1!2.15!194.37!PROX1;;chr12:100867653..100867677,+!p2@NR1H4!2.10!125.25!NR1H4;;chr15:53082521..53082549,-!p1@ONECUT1!1.96!90.39!ONECUT1;;chr19:50432453..50432468,+!p1@ATF5!1.91!4196.38!ATF5;;chr20:43029862..43029900,+!p1@HNF4A!1.91!80.35!HNF4A;;chr12:100867627..100867652,+!p1@NR1H4!1.91!79.76!NR1H4;;chrX:131547625..131547644,-!p4@MBNL3!1.89!76.80!MBNL3;;chr1:27240455..27240474,-!p1@NR0B2!1.89!76.21!NR0B2;;chr4:174451370..174451387,-!p1@HAND2!1.77!58.49!HAND2;;chr1:199996733..199996781,+!p1@NR5A2!1.75!54.94!NR5A2;;chr14:38064429..38064486,-!p1@FOXA1!1.72!51.40!FOXA1;;chr17:53344945..53344977,+!p2@HLF!1.67!45.49!HLF;;chr1:161208013..161208038,-!p1@NR1I3!1.64!43.13!NR1I3;;chr19:33793430..33793447,-!p1@CEBPA!1.63!167.19!CEBPA;;chr11:113930425..113930471,+!p1@ZBTB16!1.61!56.13!ZBTB16;;chrX:66763856..66763896,+!p1@AR!1.54!48.44!AR;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.52!32.49!PEG3;;chr1:151804244..151804310,-!p1@RORC!1.52!32.49!RORC;;chr19:50435736..50435781,+!p3@ATF5!1.51!42.54!ATF5;;chr17:53344980..53345011,+!p3@HLF!1.50!30.72!HLF;;chr16:79634624..79634642,-!p1@MAF!1.47!107.52!MAF;;chr6:391743..391759,+!p1@IRF4!1.47!28.36!IRF4;;chr8:76319876..76319926,+!p1@HNF4G!1.46!27.77!HNF4G;;chr8:71316428..71316459,-!p2@NCOA2!1.45!45.49!NCOA2;;chr12:100897130..100897149,+!p3@NR1H4!1.44!26.59!NR1H4;;chr7:73038867..73038878,-!p2@MLXIPL!1.43!25.99!MLXIPL;;chr11:113930291..113930339,+!p2@ZBTB16!1.42!40.76!ZBTB16;;chr19:4153719..4153730,+!p2@CREB3L3!1.42!25.40!CREB3L3;;chr3:126076242..126076257,-!p1@KLF15!1.40!29.54!KLF15;;chr21:39870339..39870443,-!p1@ERG!1.37!22.45!ERG;;chr16:85932760..85932775,+!p1@IRF8!1.36!21.86!IRF8;;chr1:201979743..201979762,+!p1@ELF3!1.34!20.68!ELF3;;chr12:100867736..100867750,+!p4@NR1H4!1.32!20.09!NR1H4;;chr22:29196492..29196503,-!p3@XBP1!1.31!30.13!XBP1;;chr20:62680984..62680999,-!p1@SOX18!1.31!25.40!SOX18;;chr8:11561684..11561751,+!p1@GATA4!1.31!19.50!GATA4;;chr17:26694801..26694812,-!p5@SEBOX!1.31!19.50!SEBOX;;chr17:15942934..15942957,-!p5@NCOR1!1.30!18.91!NCOR1;;chr19:46367576..46367592,+!p1@FOXA3!1.30!18.91!FOXA3;;chr6:151977801..151977813,+!p8@ESR1!1.30!18.91!ESR1;;chr15:61521495..61521506,-!p5@RORA!1.29!18.31!RORA;;chr2:238592039..238592054,+!p4@LRRFIP1!1.29!18.31!LRRFIP1;;chr1:61548225..61548299,+!p1@NFIA!1.28!232.18!NFIA;;chr1:199996702..199996732,+!p5@NR5A2!1.27!17.72!NR5A2;;chr1:214161358..214161377,+!p3@PROX1!1.26!17.13!PROX1;;chr6:134210243..134210257,+!p1@TCF21!1.26!17.13!TCF21;;chr3:126073018..126073036,-!p3@KLF15!1.26!17.13!KLF15;;chr1:214161328..214161348,+!p2@PROX1!1.24!16.54!PROX1;;chr16:51185318..51185348,-!p2@SALL1!1.24!16.54!SALL1;;chr1:161207986..161207998,-!p2@NR1I3!1.23!15.95!NR1I3;;chr16:79634595..79634620,-!p2@MAF!1.22!28.36!MAF;;chr1:209979467..209979494,-!p1@IRF6!1.21!17.13!IRF6;;chr18:42277095..42277130,+!p8@SETBP1!1.21!15.36!SETBP1;;chr17:17726907..17726958,-!p2@SREBF1!1.20!90.98!SREBF1;;chr15:60884706..60884743,-!p1@RORA!1.18!73.26!RORA;;chr2:46524897..46524911,+!p2@EPAS1!1.18!39.58!EPAS1;;chr12:24715376..24715432,-!p1@SOX5!1.18!17.72!SOX5;;chr12:103351444..103351461,+!p1@ASCL1!1.18!14.18!ASCL1;;chr18:55102598..55102623,+!p1@ONECUT2!1.18!14.18!ONECUT2;;chr7:113726357..113726443,+!p1@FOXP2!1.17!23.63!FOXP2;;chr17:53342311..53342400,+!p1@HLF!1.17!15.95!HLF;;chr11:47400078..47400106,-!p1@SPI1!1.16!13.59!SPI1;;chr17:26694979..26695007,-!p4@SEBOX!1.15!13.00!SEBOX;;chrX:131547596..131547609,-!p10@MBNL3!1.15!13.00!MBNL3;;chr8:71316403..71316427,-!p6@NCOA2!1.14!15.36!NCOA2;;chr7:97840743..97840786,+!p1@BHLHA15!1.13!12.41!BHLHA15;;chr11:113930401..113930422,+!p3@ZBTB16!1.13!12.41!ZBTB16;;chr19:50435673..50435690,+!p8@ATF5!1.13!12.41!ATF5;;chr17:80477099..80477123,+!p10@FOXK2!1.13!12.41!FOXK2;;chr6:91006518..91006570,-!p1@BACH2!1.12!27.77!BACH2;;chr18:55102628..55102646,+!p2@ONECUT2!1.11!11.82!ONECUT2;;chr1:200011711..200011752,+!p3@NR5A2!1.11!11.82!NR5A2;;chr20:43030002..43030028,+!p3@HNF4A!1.11!11.82!HNF4A;;chr20:51588873..51588953,+!p1@TSHZ2!1.10!15.36!TSHZ2;;chr3:39195037..39195069,-!p2@CSRNP1!1.09!70.30!CSRNP1;;chr8:55370487..55370503,+!p1@SOX17!1.09!11.23!SOX17;;chr13:41240717..41240735,-!p2@FOXO1!1.08!75.62!FOXO1;;chr10:94449703..94449718,+!p1@HHEX!1.08!42.54!HHEX;;chr6:1312325..1312340,+!p1@FOXQ1!1.07!17.72!FOXQ1;;chr18:6414884..6414942,-!p1@L3MBTL4!1.07!13.59!L3MBTL4;;chr3:126076264..126076305,-!p2@KLF15!1.06!14.77!KLF15;;chr3:114819124..114819200,-!p3@ZBTB20!1.04!23.63!ZBTB20;;chr22:46546494..46546525,+!p2@PPARA!1.04!19.50!PPARA;;chr2:68592406..68592424,+!p1@PLEK!1.04!10.04!PLEK;;chr20:51589133..51589159,+!p2@TSHZ2!1.04!10.04!TSHZ2;;chr1:201979703..201979721,+!p2@ELF3!1.02!9.45!ELF3;;chr17:26694940..26694949,-!p6@SEBOX!1.02!9.45!SEBOX;;chr11:47279248..47279264,+!p3@NR1H3!1.01!10.63!NR1H3;;chr13:46549911..46549956,-!p3@ZC3H13!1.00!13.00!ZC3H13;;chrX:66763815..66763854,+!p2@AR!1.00!11.82!AR;;chr22:29196433..29196445,-!p4@XBP1!1.00!10.04!XBP1;;chr2:157189180..157189290,-!p1@NR4A2!0.99!46.67!NR4A2;;chr20:50159198..50159299,-!p1@NFATC2!0.99!13.00!NFATC2;;chr1:161207964..161207975,-!p3@NR1I3!0.99!8.86!NR1I3;;chr20:42984330..42984364,+!p2@HNF4A!0.99!8.86!HNF4A;;chr3:119500891..119500904,+!p2@NR1I2!0.99!8.86!NR1I2;;chr12:100867695..100867706,+!p6@NR1H4!0.99!8.86!NR1H4;;chr6:151977817..151977828,+!p12@ESR1!0.99!8.86!ESR1;;chr13:46549688..46549712,-!p5@ZC3H13!0.97!11.23!ZC3H13;;chr10:45495709..45495725,+!p5@ZNF22!0.97!8.27!ZNF22;;chr1:47697539..47697573,-!p3@TAL1!0.97!8.27!TAL1;;chr8:48650715..48650735,-!p1@CEBPD!0.95!1042.74!CEBPD;;chr13:46542074..46542106,-!p6@ZC3H13!0.95!10.63!ZC3H13;;chr17:40540484..40540537,-!p2@STAT3!0.94!76.21!STAT3;;chr20:50179368..50179392,-!p2@NFATC2!0.94!10.04!NFATC2;;chr19:50435704..50435718,+!p11@ATF5!0.94!7.68!ATF5;;chr1:42801540..42801562,-!p4@FOXJ3!0.94!7.68!FOXJ3;;chr20:22566120..22566136,-!p4@FOXA2!0.94!7.68!FOXA2;;chr11:113930355..113930366,+!p5@ZBTB16!0.94!7.68!ZBTB16;;chr16:52581025..52581072,-!p1@TOX3!0.94!7.68!TOX3;;chr4:174451350..174451363,-!p3@HAND2!0.94!7.68!HAND2;;chr9:137218281..137218340,+!p1@RXRA!0.92!215.64!RXRA;;chr18:19749541..19749557,+!p1@GATA6!0.92!23.63!GATA6;;chr11:47279504..47279563,+!p1@NR1H3!0.92!17.13!NR1H3;;chr9:94186085..94186096,-!p3@NFIL3!0.92!12.41!NFIL3;;chr22:29196547..29196563,-!p2@XBP1!0.91!273.54!XBP1;;chr9:22447422..22447483,+!p1@DMRTA1!0.91!7.09!DMRTA1;;chr12:100867777..100867788,+!p5@NR1H4!0.91!7.09!NR1H4;;chr12:52445218..52445237,+!p1@NR4A1!0.90!90.98!NR4A1;;chr13:72441315..72441454,-!p1@DACH1!0.90!14.18!DACH1;;chr12:115121962..115121987,-!p1@TBX3!0.89!60.26!TBX3;;chr5:92918919..92918942,+!p1@NR2F1!0.89!31.31!NR2F1;;chr19:45971246..45971265,+!p1@FOSB!0.88!129.97!FOSB;;chr13:41240737..41240787,-!p1@FOXO1!0.87!80.35!FOXO1;;chr3:71179699..71179744,-!p2@FOXP1!0.87!50.22!FOXP1;;chr14:75746722..75746777,+!p2@FOS!0.87!8.27!FOS;;chr17:41223072..41223083,-!p12@BRCA1!0.87!6.50!BRCA1;;chr7:100065686..100065701,-!p2@TSC22D4!0.87!6.50!TSC22D4;;chr7:73038865..73038866,-!p4@MLXIPL!0.87!6.50!MLXIPL;;chr8:10588010..10588030,-!p1@SOX7!0.87!6.50!SOX7;;chr1:199996831..199996843,+!p4@NR5A2!0.87!6.50!NR5A2;;chr1:209975591..209975607,-!p5@IRF6!0.87!6.50!IRF6;;chr20:22564895..22564910,-!p1@FOXA2!0.87!6.50!FOXA2;;chr3:119500941..119500961,+!p1@NR1I2!0.87!6.50!NR1I2;;chrX:66763914..66763933,+!p3@AR!0.87!6.50!AR;;chr9:126774018..126774055,+!p1@LHX2!0.87!6.50!LHX2;;chr14:75745523..75745537,+!p1@FOS!0.86!793.43!FOS;;chr9:137217986..137218049,+!p3@RXRA!0.86!18.91!RXRA;;chr9:94186101..94186122,-!p1@NFIL3!0.85!90.98!NFIL3;;chr20:48809000..48809053,+!p12@CEBPB!0.85!8.27!CEBPB;;chr15:96873984..96873999,+!p3@NR2F2!0.84!46.67!NR2F2;;chr16:51185172..51185197,-!p1@SALL1!0.84!5.91!SALL1;;chr19:50434005..50434020,+!p10@ATF5!0.84!5.91!ATF5;;chr1:40105299..40105326,-!p1@HEYL!0.84!5.91!HEYL;;chr5:71803177..71803255,-!p1@ZNF366!0.84!5.91!ZNF366;;chr6:7108769..7108785,+!p11@RREB1!0.84!5.91!RREB1;;chr7:35293685..35293718,-!p1@TBX20!0.84!5.91!TBX20;;chr2:180726040..180726052,-!p2@ZNF385B!0.84!5.91!ZNF385B;;chr2:85981107..85981120,+!p3@ATOH8!0.84!5.91!ATOH8;;chr3:114619463..114619476,-!p31@ZBTB20!0.84!5.91!ZBTB20;;chr4:149363475..149363492,-!p2@NR3C2!0.84!5.91!NR3C2;;chr9:73029219..73029289,-!p2@KLF9!0.83!18.31!KLF9;;chr15:61521417..61521460,-!p2@RORA!0.83!13.59!RORA;;chr18:19749517..19749531,+!p3@GATA6!0.83!10.63!GATA6;;chr1:212782094..212782109,+!p1@ATF3!0.82!166.60!ATF3;;chr6:126240380..126240430,+!p2@NCOA7!0.82!15.36!NCOA7;;chr6:7108179..7108199,+!p4@RREB1!0.82!11.82!RREB1;;chr20:39317868..39317884,-!p1@MAFB!0.81!70.30!MAFB;;chr2:10183651..10183713,+!p1@KLF11!0.81!42.54!KLF11;;chr6:91006575..91006602,-!p2@BACH2!0.81!8.27!BACH2;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.80!16.54!ZKSCAN1;;chr15:61521462..61521482,-!p4@RORA!0.80!5.32!RORA;;chr16:79634464..79634493,-!p5@MAF!0.80!5.32!MAF;;chr11:113930477..113930488,+!p4@ZBTB16!0.80!5.32!ZBTB16;;chr11:47400062..47400077,-!p2@SPI1!0.80!5.32!SPI1;;chr12:121416340..121416360,+!p1@HNF1A!0.80!5.32!HNF1A;;chr12:54778471..54778528,-!p1@ZNF385A!0.80!5.32!ZNF385A;;chrX:66764343..66764362,+!p4@AR!0.80!5.32!AR;;chr2:180726058..180726098,-!p3@ZNF385B!0.80!5.32!ZNF385B;;chr3:119500908..119500919,+!p3@NR1I2!0.80!5.32!NR1I2;;chr3:126072967..126072981,-!p4@KLF15!0.80!5.32!KLF15;;chr3:141150883..141150961,+!p6@ZBTB38!0.80!5.32!ZBTB38;;chr19:46801639..46801699,+!p1@HIF3A!0.80!5.32!HIF3A;;chr19:54041669..54041697,+!p2@ZNF331!0.80!5.32!ZNF331;;chr1:161207875..161207889,-!p4@NR1I3!0.80!5.32!NR1I3;;chr1:200008734..200008765,+!p2@NR5A2!0.80!5.32!NR5A2;;chr1:2179370..2179409,+!p16@SKI!0.80!5.32!SKI;;chr2:46524537..46524553,+!p1@EPAS1!0.79!551.80!EPAS1;;chr9:94186131..94186174,-!p2@NFIL3!0.79!46.67!NFIL3;;chr10:114710098..114710130,+!p2@TCF7L2!0.78!40.76!TCF7L2;;chr19:1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+|ffid_belonging_in_development=CL:0000134,CL:0000223
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11684-122I1: Difference between revisions

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Revision as of 21:43, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0