FFCP PHASE1:Mm9::chr9:64988982..64989005,+: Difference between revisions
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|id=chr9:64988982..64989005,+ | |id=chr9:64988982..64989005,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.53e-14!33;CL:0000047!3.53e-14!33;CL:0000031!3.53e-14!33;CL:0000404!3.53e-14!33;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0002319!5.24e-13!43;CL:0000393!3.38e-09!39;CL:0000211!3.38e-09!39;CL:0000055!2.23e-08!50 | |ontology_enrichment_celltype=CL:0000540!3.53e-14!33;CL:0000047!3.53e-14!33;CL:0000031!3.53e-14!33;CL:0000404!3.53e-14!33;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0002319!5.24e-13!43;CL:0000393!3.38e-09!39;CL:0000211!3.38e-09!39;CL:0000055!2.23e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.69e-17,33;CL:0000047,1.69e-17,33;CL:0000031,1.69e-17,33;CL:0000404,1.69e-17,33;CL:0000117,1.45e-16,23;CL:0000337,1.45e-16,23;CL:0000221,2.58e-15,44;CL:0000133,2.58e-15,44;CL:0002319,1.54e-14,43;CL:0000393,8.81e-13,39;CL:0000211,8.81e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.35e-22!73;UBERON:0005743!7.35e-22!73;UBERON:0004121!1.45e-21!102;UBERON:0000924!1.45e-21!102;UBERON:0006601!1.45e-21!102;UBERON:0002346!1.87e-21!71;UBERON:0003075!1.87e-21!71;UBERON:0007284!1.87e-21!71;UBERON:0000073!5.71e-21!75;UBERON:0001016!5.71e-21!75;UBERON:0000033!2.75e-18!63;UBERON:0001049!9.04e-17!52;UBERON:0005068!9.04e-17!52;UBERON:0006241!9.04e-17!52;UBERON:0007135!9.04e-17!52;UBERON:0003056!4.25e-16!49;UBERON:0000955!3.03e-15!50;UBERON:0006238!3.03e-15!50;UBERON:0002616!6.43e-15!49;UBERON:0003080!8.40e-13!40;UBERON:0002780!1.98e-12!39;UBERON:0001890!1.98e-12!39;UBERON:0006240!1.98e-12!39;UBERON:0002020!5.47e-11!34;UBERON:0002791!1.80e-08!29;UBERON:0003528!1.80e-08!29;UBERON:0001893!1.80e-08!29;UBERON:0000468!2.12e-07!333;UBERON:0000153!3.17e-07!94;UBERON:0007811!9.66e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!7.35e-22!73;UBERON:0005743!7.35e-22!73;UBERON:0004121!1.45e-21!102;UBERON:0000924!1.45e-21!102;UBERON:0006601!1.45e-21!102;UBERON:0002346!1.87e-21!71;UBERON:0003075!1.87e-21!71;UBERON:0007284!1.87e-21!71;UBERON:0000073!5.71e-21!75;UBERON:0001016!5.71e-21!75;UBERON:0000033!2.75e-18!63;UBERON:0001049!9.04e-17!52;UBERON:0005068!9.04e-17!52;UBERON:0006241!9.04e-17!52;UBERON:0007135!9.04e-17!52;UBERON:0003056!4.25e-16!49;UBERON:0000955!3.03e-15!50;UBERON:0006238!3.03e-15!50;UBERON:0002616!6.43e-15!49;UBERON:0003080!8.40e-13!40;UBERON:0002780!1.98e-12!39;UBERON:0001890!1.98e-12!39;UBERON:0006240!1.98e-12!39;UBERON:0002020!5.47e-11!34;UBERON:0002791!1.80e-08!29;UBERON:0003528!1.80e-08!29;UBERON:0001893!1.80e-08!29;UBERON:0000468!2.12e-07!333;UBERON:0000153!3.17e-07!94;UBERON:0007811!9.66e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-20,73;UBERON:0001016,1.59e-19,75;UBERON:0002346,2.16e-19,64;UBERON:0003075,2.16e-19,64;UBERON:0007284,2.16e-19,64;UBERON:0004121,3.69e-19,95;UBERON:0000924,3.69e-19,95;UBERON:0006601,3.69e-19,95;UBERON:0010371,8.09e-17,73;UBERON:0000073,5.47e-16,54;UBERON:0003056,1.33e-15,49;UBERON:0001049,5.99e-15,52;UBERON:0005068,5.99e-15,52;UBERON:0006241,5.99e-15,52;UBERON:0007135,5.99e-15,52;UBERON:0010314,2.36e-13,92;UBERON:0000955,4.24e-12,47;UBERON:0006238,4.24e-12,47;UBERON:0003080,6.07e-12,40;UBERON:0002616,9.90e-12,46;UBERON:0002780,1.65e-11,39;UBERON:0001890,1.65e-11,39;UBERON:0006240,1.65e-11,39;UBERON:0002020,8.62e-10,34;UBERON:0003528,5.24e-07,29;UBERON:0002791,5.24e-07,29;UBERON:0001893,5.24e-07,29 | |||
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| ||
|short_description=p1@Igdcc3 | |short_description=p1@Igdcc3 | ||
}} | }} |
Revision as of 13:15, 13 November 2012
Short description: | p1@Igdcc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Igdcc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_NM_008988, uc009qcv.1, uc009qcw.1_5end |
EntrezGene: | Igdcc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.69e-17 | 33 |
neuronal stem cell | 1.69e-17 | 33 |
neuroblast | 1.69e-17 | 33 |
electrically signaling cell | 1.69e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.45e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-16 | 23 |
ectodermal cell | 2.58e-15 | 44 |
neurectodermal cell | 2.58e-15 | 44 |
neural cell | 1.54e-14 | 43 |
electrically responsive cell | 8.81e-13 | 39 |
electrically active cell | 8.81e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.09e-20 | 73 |
nervous system | 1.59e-19 | 75 |
neurectoderm | 2.16e-19 | 64 |
neural plate | 2.16e-19 | 64 |
presumptive neural plate | 2.16e-19 | 64 |
ectoderm-derived structure | 3.69e-19 | 95 |
ectoderm | 3.69e-19 | 95 |
presumptive ectoderm | 3.69e-19 | 95 |
ecto-epithelium | 8.09e-17 | 73 |
regional part of nervous system | 5.47e-16 | 54 |
pre-chordal neural plate | 1.33e-15 | 49 |
neural tube | 5.99e-15 | 52 |
neural rod | 5.99e-15 | 52 |
future spinal cord | 5.99e-15 | 52 |
neural keel | 5.99e-15 | 52 |
structure with developmental contribution from neural crest | 2.36e-13 | 92 |
brain | 4.24e-12 | 47 |
future brain | 4.24e-12 | 47 |
anterior neural tube | 6.07e-12 | 40 |
regional part of brain | 9.90e-12 | 46 |
regional part of forebrain | 1.65e-11 | 39 |
forebrain | 1.65e-11 | 39 |
future forebrain | 1.65e-11 | 39 |
gray matter | 8.62e-10 | 34 |
brain grey matter | 5.24e-07 | 29 |
regional part of telencephalon | 5.24e-07 | 29 |
telencephalon | 5.24e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.