FFCP PHASE1:Mm9::chr12:28027561..28027591,-: Difference between revisions
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|id=chr12:28027561..28027591,- | |id=chr12:28027561..28027591,- | ||
|ontology_enrichment_celltype=CL:0000540!4.26e-14!33;CL:0000047!4.26e-14!33;CL:0000031!4.26e-14!33;CL:0000404!4.26e-14!33;CL:0000221!9.65e-13!44;CL:0000133!9.65e-13!44;CL:0002319!1.55e-12!43;CL:0000393!1.01e-09!39;CL:0000211!1.01e-09!39;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000055!1.94e-08!50 | |ontology_enrichment_celltype=CL:0000540!4.26e-14!33;CL:0000047!4.26e-14!33;CL:0000031!4.26e-14!33;CL:0000404!4.26e-14!33;CL:0000221!9.65e-13!44;CL:0000133!9.65e-13!44;CL:0002319!1.55e-12!43;CL:0000393!1.01e-09!39;CL:0000211!1.01e-09!39;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000055!1.94e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.62e-14,33;CL:0000047,1.62e-14,33;CL:0000031,1.62e-14,33;CL:0000404,1.62e-14,33;CL:0000221,4.08e-13,44;CL:0000133,4.08e-13,44;CL:0002319,6.65e-13,43;CL:0000393,4.58e-10,39;CL:0000211,4.58e-10,39;CL:0000117,9.07e-10,23;CL:0000337,9.07e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.28e-16!73;UBERON:0005743!8.28e-16!73;UBERON:0000073!2.85e-15!75;UBERON:0001016!2.85e-15!75;UBERON:0004121!3.02e-14!102;UBERON:0000924!3.02e-14!102;UBERON:0006601!3.02e-14!102;UBERON:0002346!6.54e-12!71;UBERON:0003075!6.54e-12!71;UBERON:0007284!6.54e-12!71;UBERON:0003056!2.75e-11!49;UBERON:0000468!1.14e-10!333;UBERON:0000033!5.24e-10!63;UBERON:0001049!2.40e-09!52;UBERON:0005068!2.40e-09!52;UBERON:0006241!2.40e-09!52;UBERON:0007135!2.40e-09!52;UBERON:0000922!4.73e-09!328;UBERON:0003080!6.40e-09!40;UBERON:0002780!6.95e-09!39;UBERON:0001890!6.95e-09!39;UBERON:0006240!6.95e-09!39;UBERON:0000955!3.24e-08!50;UBERON:0006238!3.24e-08!50;UBERON:0002616!4.00e-08!49;UBERON:0002020!1.14e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!8.28e-16!73;UBERON:0005743!8.28e-16!73;UBERON:0000073!2.85e-15!75;UBERON:0001016!2.85e-15!75;UBERON:0004121!3.02e-14!102;UBERON:0000924!3.02e-14!102;UBERON:0006601!3.02e-14!102;UBERON:0002346!6.54e-12!71;UBERON:0003075!6.54e-12!71;UBERON:0007284!6.54e-12!71;UBERON:0003056!2.75e-11!49;UBERON:0000468!1.14e-10!333;UBERON:0000033!5.24e-10!63;UBERON:0001049!2.40e-09!52;UBERON:0005068!2.40e-09!52;UBERON:0006241!2.40e-09!52;UBERON:0007135!2.40e-09!52;UBERON:0000922!4.73e-09!328;UBERON:0003080!6.40e-09!40;UBERON:0002780!6.95e-09!39;UBERON:0001890!6.95e-09!39;UBERON:0006240!6.95e-09!39;UBERON:0000955!3.24e-08!50;UBERON:0006238!3.24e-08!50;UBERON:0002616!4.00e-08!49;UBERON:0002020!1.14e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-16,73;UBERON:0001016,9.90e-16,75;UBERON:0004121,1.28e-14,95;UBERON:0000924,1.28e-14,95;UBERON:0006601,1.28e-14,95;UBERON:0002346,2.67e-13,64;UBERON:0003075,2.67e-13,64;UBERON:0007284,2.67e-13,64;UBERON:0003056,1.94e-11,49;UBERON:0010371,6.01e-11,73;UBERON:0010314,3.15e-10,92;UBERON:0000073,7.32e-10,54;UBERON:0001049,1.32e-09,52;UBERON:0005068,1.32e-09,52;UBERON:0006241,1.32e-09,52;UBERON:0007135,1.32e-09,52;UBERON:0003080,3.62e-09,40;UBERON:0002780,3.95e-09,39;UBERON:0001890,3.95e-09,39;UBERON:0006240,3.95e-09,39;UBERON:0000922,1.96e-08,320;UBERON:0000955,2.49e-08,47;UBERON:0006238,2.49e-08,47;UBERON:0002616,3.07e-08,46;UBERON:0002020,7.13e-08,34 | |||
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| ||
|short_description=p1@Sox11 | |short_description=p1@Sox11 | ||
}} | }} |
Revision as of 13:26, 13 November 2012
Short description: | p1@Sox11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sox11_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 0bp_to_ENSMUST00000079063, NM_009234, uc007nfn.2_5end |
EntrezGene: | Sox11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.62e-14 | 33 |
neuronal stem cell | 1.62e-14 | 33 |
neuroblast | 1.62e-14 | 33 |
electrically signaling cell | 1.62e-14 | 33 |
ectodermal cell | 4.08e-13 | 44 |
neurectodermal cell | 4.08e-13 | 44 |
neural cell | 6.65e-13 | 43 |
electrically responsive cell | 4.58e-10 | 39 |
electrically active cell | 4.58e-10 | 39 |
CNS neuron (sensu Vertebrata) | 9.07e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.07e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.76e-16 | 73 |
nervous system | 9.90e-16 | 75 |
ectoderm-derived structure | 1.28e-14 | 95 |
ectoderm | 1.28e-14 | 95 |
presumptive ectoderm | 1.28e-14 | 95 |
neurectoderm | 2.67e-13 | 64 |
neural plate | 2.67e-13 | 64 |
presumptive neural plate | 2.67e-13 | 64 |
pre-chordal neural plate | 1.94e-11 | 49 |
ecto-epithelium | 6.01e-11 | 73 |
structure with developmental contribution from neural crest | 3.15e-10 | 92 |
regional part of nervous system | 7.32e-10 | 54 |
neural tube | 1.32e-09 | 52 |
neural rod | 1.32e-09 | 52 |
future spinal cord | 1.32e-09 | 52 |
neural keel | 1.32e-09 | 52 |
anterior neural tube | 3.62e-09 | 40 |
regional part of forebrain | 3.95e-09 | 39 |
forebrain | 3.95e-09 | 39 |
future forebrain | 3.95e-09 | 39 |
embryo | 1.96e-08 | 320 |
brain | 2.49e-08 | 47 |
future brain | 2.49e-08 | 47 |
regional part of brain | 3.07e-08 | 46 |
gray matter | 7.13e-08 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.