FFCP PHASE1:Mm9::chr7:6124135..6124158,+: Difference between revisions
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|id=chr7:6124135..6124158,+ | |id=chr7:6124135..6124158,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.12e-14!44;CL:0000133!2.12e-14!44;CL:0002319!3.01e-14!43;CL:0000117!4.55e-14!23;CL:0000337!4.55e-14!23;CL:0000540!6.28e-13!33;CL:0000047!6.28e-13!33;CL:0000031!6.28e-13!33;CL:0000404!6.28e-13!33;CL:0000055!3.38e-10!50;CL:0000393!3.91e-09!39;CL:0000211!3.91e-09!39 | |ontology_enrichment_celltype=CL:0000221!2.12e-14!44;CL:0000133!2.12e-14!44;CL:0002319!3.01e-14!43;CL:0000117!4.55e-14!23;CL:0000337!4.55e-14!23;CL:0000540!6.28e-13!33;CL:0000047!6.28e-13!33;CL:0000031!6.28e-13!33;CL:0000404!6.28e-13!33;CL:0000055!3.38e-10!50;CL:0000393!3.91e-09!39;CL:0000211!3.91e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.05e-14,44;CL:0000133,2.05e-14,44;CL:0002319,2.92e-14,43;CL:0000117,4.41e-14,23;CL:0000337,4.41e-14,23;CL:0000540,6.11e-13,33;CL:0000047,6.11e-13,33;CL:0000031,6.11e-13,33;CL:0000404,6.11e-13,33;CL:0000393,3.84e-09,39;CL:0000211,3.84e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.42e-20!73;UBERON:0005743!7.42e-20!73;UBERON:0000073!4.03e-19!75;UBERON:0001016!4.03e-19!75;UBERON:0002346!1.10e-18!71;UBERON:0003075!1.10e-18!71;UBERON:0007284!1.10e-18!71;UBERON:0003056!5.22e-16!49;UBERON:0001049!5.28e-16!52;UBERON:0005068!5.28e-16!52;UBERON:0006241!5.28e-16!52;UBERON:0007135!5.28e-16!52;UBERON:0004121!7.54e-16!102;UBERON:0000924!7.54e-16!102;UBERON:0006601!7.54e-16!102;UBERON:0000033!9.81e-16!63;UBERON:0000153!3.92e-15!94;UBERON:0002616!3.17e-14!49;UBERON:0007811!5.26e-14!86;UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0003080!3.34e-12!40;UBERON:0002780!4.14e-12!39;UBERON:0001890!4.14e-12!39;UBERON:0006240!4.14e-12!39;UBERON:0002020!8.54e-12!34;UBERON:0002791!5.13e-09!29;UBERON:0003528!5.13e-09!29;UBERON:0001893!5.13e-09!29 | |ontology_enrichment_uberon=UBERON:0001017!7.42e-20!73;UBERON:0005743!7.42e-20!73;UBERON:0000073!4.03e-19!75;UBERON:0001016!4.03e-19!75;UBERON:0002346!1.10e-18!71;UBERON:0003075!1.10e-18!71;UBERON:0007284!1.10e-18!71;UBERON:0003056!5.22e-16!49;UBERON:0001049!5.28e-16!52;UBERON:0005068!5.28e-16!52;UBERON:0006241!5.28e-16!52;UBERON:0007135!5.28e-16!52;UBERON:0004121!7.54e-16!102;UBERON:0000924!7.54e-16!102;UBERON:0006601!7.54e-16!102;UBERON:0000033!9.81e-16!63;UBERON:0000153!3.92e-15!94;UBERON:0002616!3.17e-14!49;UBERON:0007811!5.26e-14!86;UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0003080!3.34e-12!40;UBERON:0002780!4.14e-12!39;UBERON:0001890!4.14e-12!39;UBERON:0006240!4.14e-12!39;UBERON:0002020!8.54e-12!34;UBERON:0002791!5.13e-09!29;UBERON:0003528!5.13e-09!29;UBERON:0001893!5.13e-09!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.25e-20,64;UBERON:0003075,5.25e-20,64;UBERON:0007284,5.25e-20,64;UBERON:0001017,7.09e-20,73;UBERON:0001016,3.86e-19,75;UBERON:0000073,3.43e-17,54;UBERON:0004121,1.52e-16,95;UBERON:0000924,1.52e-16,95;UBERON:0006601,1.52e-16,95;UBERON:0003056,5.04e-16,49;UBERON:0001049,5.10e-16,52;UBERON:0005068,5.10e-16,52;UBERON:0006241,5.10e-16,52;UBERON:0007135,5.10e-16,52;UBERON:0010371,4.48e-15,73;UBERON:0002616,1.30e-13,46;UBERON:0000955,6.14e-13,47;UBERON:0006238,6.14e-13,47;UBERON:0010314,2.67e-12,92;UBERON:0003080,3.26e-12,40;UBERON:0002780,4.04e-12,39;UBERON:0001890,4.04e-12,39;UBERON:0006240,4.04e-12,39;UBERON:0002020,8.33e-12,34;UBERON:0003528,5.04e-09,29;UBERON:0002791,5.04e-09,29;UBERON:0001893,5.04e-09,29 | |||
|phase1_expression=3.68342348341026,0.348975407639361,1.36499771816861,0.90739263392049,1.00179145989269,2.01455126294268,1.86890112476421,2.1950964985068,1.40788722151667,0.468129052643987,1.71217968225505,1.43589886191606,1.54080656938085,1.39872643870396,0.999329285446988,2.02475267389826,2.09868563438444,2.36596624018678,1.37114433605739,0.84877930359606,3.14660173558958,3.47518329203099,2.08959831311148,1.91990907352088,1.60586496747019,0.57423196411502,2.58457197695445,1.939241094173,2.66032787238923,1.00812051903972,1.10865255327652,3.81018404075779,6.76571266343027,0,1.73310971850765,4.3221007793208,2.85837098767317,0,0,0.523523743973798,1.17646297606203,0,0.971020706062307,1.51076181570693,1.4192770370732,2.0190142737785,10.9534788208725,3.70642765846759,3.07560655828261,3.30530828426282,3.21968769738334,7.18762821824858,1.17447824240415,0.725362142011344,1.68046899571232,1.54355661621568,1.43266719969378,2.57836046138721,8.29497489524351,12.6957835025288,11.4089652631112,2.37191172448392,6.22506357277798,6.29929802096979,5.93319817540185,4.2628806896766,6.2916023208865,8.06858441175265,10.0578923939223,9.45041568321835,8.83364837675805,9.42648248532552,8.83474163806454,8.20688354740192,13.7059023556078,12.8690630125403,2.20231761998777,6.63974158042976,7.21950706304344,8.83638127792299,17.4741399280602,7.8137005583514,6.42120897703176,9.00420176050688,7.48711414106369,6.77645746589436,7.83044244395066,8.20157561631323,2.34751199332871,2.11600368298999,2.02905142091174,1.72084775396277,0,4.85732872474035,2.59910566979068,0.896053774194671,1.68533304158102,2.55645483867087,2.33807404142582,4.59341446863442,3.80277233397037,2.56652954828636,2.54805239706646,0,2.59789249213457,2.28023878927589,0.505524445014783,2.39786147410026,2.07150306917737,2.82040064223167,4.3371331691534,1.52232739156071,2.07553947530453,2.71300752994721,3.05730638552832,2.76466500925286,1.97755974187499,0.86759614151947,0.884610551949874,0.808834249737046,1.76673214768315,0.969750506270444,0,4.9772735491963,5.44561437714983,1.27728527604296,1.55759661857696,2.39961092397363,1.52484272487678,3.59497534571574,1.37250180845588,8.41884159156192,5.04090528557602,5.8814555185976,3.94797284663164,4.05603157669394,4.27725328171328,0.870848794270651,1.26361379216837,3.57751155007006,5.46505860443356,4.59804208866946,3.96136685571768,5.42537344208574,7.14383241088942,7.81493693737584,12.3686276418842,6.46758426847539,4.52692785158969,5.10586416453112,4.75068035242662,4.60311038097907,3.05851974148158,3.83077383174383,2.05782136407943,4.37875387000685,2.1066395619397,2.05878325691772,1.98914449576915,1.65700618028402,2.81431271977315,3.24111710629827,3.07768156260773,1.96764231747404,2.77680803197281,3.25547522650571,2.41446061259657,2.45207218971056,1.15191894939436,1.80584210487005,1.4592385718254,1.02339991197733,1.3173006917463,1.8788898626452,2.52347938276953,5.86556290561921,0.660837565967596,0.528901133327089,4.05247676016945,3.94802342162745,3.09281907173024,1.81515172161008,1.77902435075896,1.90225626112559,1.89811624617805,2.30578536613615,3.01602250560323,1.79060824837036,0.779856348476481,2.69645822596266,0.432276099749388,1.1948476395262,3.41402221715547,3.88444942873078,4.50830942692322,2.03651327845314,3.68509725618489,4.06787755363848,3.09859031908861,2.65698266363284,2.98297582898612,2.96153193412321,2.37162101669719,2.33583148002532,1.76903095601883,0.899448449539415,3.04290182082754,2.65294875727659,1.01850340712568,1.15078454980324,3.89124544260085,4.11842119782122,7.18841032636773,2.97712758134803,3.12037673114561,3.03094653536534,2.69096120282868,2.8946611281802,2.58654466233247,4.54779388249163,3.7481944581666,3.39490171550376,2.58159273117352,4.35516269348721,4.28478553594825,5.46374214001837,1.89162172927429,2.6575762757853,2.23236676120482,1.80249646187312,3.7990696010497,2.4590339958857,1.50791283939272,3.80733978673097,0.491764273019036,1.10374698521893,2.24770825982909,4.10240903072711,2.29508923527346,1.26235463602186,3.47059041357882,3.51394869866975,2.58508077279359,4.54040716109849,3.34198011123591,4.24614796183249,2.02405350837447,4.38383786866968,1.97643888973262,1.60660658210904,2.98074178937364,3.20518086601059,4.23506094319298,2.14461159864296,1.32745138339963,4.12727081463468,5.74414758233027,2.07465587731488,2.06711325016541,1.84461088766356,2.58428293168221,2.54473610634254,1.78248689192361,0.632073515871632,3.16255825724996,1.03135543248187,3.74483566329167,4.50152735078276,6.98536892426874,9.43082954139006,2.6601035046341,5.35106452806212,6.08831376227848,7.00269382963578,0.938686832254841,0.847328283455281,1.10264199027481,0.49465875882444,1.29171541356724,1.5078231232039,2.14870219205646,1.47726809770555,1.1659233465194,2.03967832211561,1.19609616558497,2.68302928352189,1.29636169158798,0.565105371014073,1.6403307326523,1.60144721244566,1.86976272993241,2.23922323717853,2.3493995546752,0.954670618015114,2.37251995185852,2.84647253977588,2.91614420218863,3.13632444021703,3.27543845619266,1.48350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| ||
|short_description=p2@Zfp444 | |short_description=p2@Zfp444 | ||
}} | }} |
Revision as of 06:32, 14 November 2012
Short description: | p2@Zfp444 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp444_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 20bp_to_ENSMUST00000108566, NM_001146024, NM_028316, uc009fat.2, uc009fau.2_5end |
EntrezGene: | Zfp444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.05e-14 | 44 |
neurectodermal cell | 2.05e-14 | 44 |
neural cell | 2.92e-14 | 43 |
CNS neuron (sensu Vertebrata) | 4.41e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.41e-14 | 23 |
neuron | 6.11e-13 | 33 |
neuronal stem cell | 6.11e-13 | 33 |
neuroblast | 6.11e-13 | 33 |
electrically signaling cell | 6.11e-13 | 33 |
electrically responsive cell | 3.84e-09 | 39 |
electrically active cell | 3.84e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.25e-20 | 64 |
neural plate | 5.25e-20 | 64 |
presumptive neural plate | 5.25e-20 | 64 |
central nervous system | 7.09e-20 | 73 |
nervous system | 3.86e-19 | 75 |
regional part of nervous system | 3.43e-17 | 54 |
ectoderm-derived structure | 1.52e-16 | 95 |
ectoderm | 1.52e-16 | 95 |
presumptive ectoderm | 1.52e-16 | 95 |
pre-chordal neural plate | 5.04e-16 | 49 |
neural tube | 5.10e-16 | 52 |
neural rod | 5.10e-16 | 52 |
future spinal cord | 5.10e-16 | 52 |
neural keel | 5.10e-16 | 52 |
ecto-epithelium | 4.48e-15 | 73 |
regional part of brain | 1.30e-13 | 46 |
brain | 6.14e-13 | 47 |
future brain | 6.14e-13 | 47 |
structure with developmental contribution from neural crest | 2.67e-12 | 92 |
anterior neural tube | 3.26e-12 | 40 |
regional part of forebrain | 4.04e-12 | 39 |
forebrain | 4.04e-12 | 39 |
future forebrain | 4.04e-12 | 39 |
gray matter | 8.33e-12 | 34 |
brain grey matter | 5.04e-09 | 29 |
regional part of telencephalon | 5.04e-09 | 29 |
telencephalon | 5.04e-09 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.