FFCP PHASE1:Mm9::chr5:133019233..133019249,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:133019233..133019249,- | |id=chr5:133019233..133019249,- | ||
|ontology_enrichment_celltype=CL:0000540!5.13e-08!33;CL:0000047!5.13e-08!33;CL:0000031!5.13e-08!33;CL:0000404!5.13e-08!33 | |ontology_enrichment_celltype=CL:0000540!5.13e-08!33;CL:0000047!5.13e-08!33;CL:0000031!5.13e-08!33;CL:0000404!5.13e-08!33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.87e-12!102;UBERON:0000924!1.87e-12!102;UBERON:0006601!1.87e-12!102;UBERON:0002346!9.48e-12!71;UBERON:0003075!9.48e-12!71;UBERON:0007284!9.48e-12!71;UBERON:0001017!2.35e-11!73;UBERON:0005743!2.35e-11!73;UBERON:0000033!2.75e-11!63;UBERON:0000073!2.44e-10!75;UBERON:0001016!2.44e-10!75;UBERON:0000955!4.63e-09!50;UBERON:0006238!4.63e-09!50;UBERON:0001049!5.22e-09!52;UBERON:0005068!5.22e-09!52;UBERON:0006241!5.22e-09!52;UBERON:0007135!5.22e-09!52;UBERON:0003056!8.57e-09!49;UBERON:0000468!1.15e-08!333;UBERON:0002616!1.65e-08!49;UBERON:0000922!3.34e-08!328;UBERON:0002020!8.81e-07!34 | |ontology_enrichment_uberon=UBERON:0004121!1.87e-12!102;UBERON:0000924!1.87e-12!102;UBERON:0006601!1.87e-12!102;UBERON:0002346!9.48e-12!71;UBERON:0003075!9.48e-12!71;UBERON:0007284!9.48e-12!71;UBERON:0001017!2.35e-11!73;UBERON:0005743!2.35e-11!73;UBERON:0000033!2.75e-11!63;UBERON:0000073!2.44e-10!75;UBERON:0001016!2.44e-10!75;UBERON:0000955!4.63e-09!50;UBERON:0006238!4.63e-09!50;UBERON:0001049!5.22e-09!52;UBERON:0005068!5.22e-09!52;UBERON:0006241!5.22e-09!52;UBERON:0007135!5.22e-09!52;UBERON:0003056!8.57e-09!49;UBERON:0000468!1.15e-08!333;UBERON:0002616!1.65e-08!49;UBERON:0000922!3.34e-08!328;UBERON:0002020!8.81e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.57e-11,73;UBERON:0002346,1.50e-10,64;UBERON:0003075,1.50e-10,64;UBERON:0007284,1.50e-10,64;UBERON:0001016,2.41e-10,75;UBERON:0000955,5.00e-10,47;UBERON:0006238,5.00e-10,47;UBERON:0004121,5.13e-10,95;UBERON:0000924,5.13e-10,95;UBERON:0006601,5.13e-10,95;UBERON:0000073,5.19e-10,54;UBERON:0001049,7.08e-10,52;UBERON:0005068,7.08e-10,52;UBERON:0006241,7.08e-10,52;UBERON:0007135,7.08e-10,52;UBERON:0003056,9.64e-10,49;UBERON:0002020,2.11e-09,34;UBERON:0002616,3.45e-09,46;UBERON:0000956,3.46e-09,21;UBERON:0001869,3.46e-09,21;UBERON:0000203,3.46e-09,21;UBERON:0010371,8.68e-09,73;UBERON:0003528,1.94e-08,29;UBERON:0002791,1.94e-08,29;UBERON:0001893,1.94e-08,29;UBERON:0003080,3.52e-08,40;UBERON:0002780,1.26e-07,39;UBERON:0001890,1.26e-07,39;UBERON:0006240,1.26e-07,39;UBERON:0010314,9.24e-07,92 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0.515672092277442,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.07379224616955,2.02508907497536,1.68259969081106,1.14260393761521,1.10434270475807,0.61245399607477,1.24599112323707,1.83843757322004,1.10115880999389,0.638436690425939,0.614426133024974,2.2420668914133,0.914876436024097,1.04182674111352,0,0,0.45839474333043,0.589257170947335,0.569486723196412,1.86399445825301,0,0,0.579728977403356,0,0,0,0,0.448026887097336,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.693941307064543,0.608930956624282,0,0.753613202763113,1.05829836422134,0.251333182659351,0,0.433798070759735,0,1.13236794963186,0.441683036920787,0,0,3.51336956413857,5.44561437714983,0.255457055208591,0,0,0,1.19832511523858,0.915001205637253,1.13088916901578,2.08589184230732,1.27857728665165,0.41557608911912,1.62241263067758,0.509196819251581,0.746441823660558,0.252722758433675,0.841767423545896,0.520481771850815,0.919608417733892,1.0803727788321,0.30140963567143,1.36072998302656,1.40925092313335,1.21812241927647,1.55222022443409,1.29340795759705,1.89106080167819,1.93546236580344,0,1.39023624612799,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.900310307305074,0.946978942340841,0.787056926989615,0.462801338662135,0.465067889500816,1.3413670069981,0.700592054203017,0.329119699826961,1.14917224855367,0.486412857275134,0.584799949701329,1.09775057645525,0.402619256281115,2.10289948564127,2.57261530948211,0,0.264450566663544,0.639864751605702,1.16118335930219,0.644337306610467,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,1.14248512609729,0,1.4255592949172,0.387904974335251,1.05203729835478,0.505892296994058,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0.757965647081939,0.977789858652155,0.678980343100753,0.938760993154008,1.00503754465089,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.690739927463582,0.578596234326046,0,0,0.491764273019036,1.10374698521893,0.80275294993896,1.05490517932983,0,0,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,2.00518806674155,0.566153061577665,1.21443210502468,1.75353514746787,2.37172666767914,5.14114106274891,0.567760340833074,0.534196811001766,0.651547837414304,0.494910368917606,0,0,0,0.565815239267694,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.04263763452273,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.535106452806212,0.822745103010605,0,0,0.63549621259146,0,0.16488625294148,0.322928853391811,0.422190474497091,0.716234064018819,0.492422699235184,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0.228778173206523,0,0,0,0,1.26534397432454,0.813277868507395,0.648032044930808,0.836353184057875,0.436725127492355,0.674321731924103,0.826534557253359,0,0.259229946583586,0.621339313086926,0.56369293868419,0.747582730219894,0.496375471371293,0.972255941720238,0.904118764344118,1.18269287843545,0.938857909166032,1.8228613878153,2.41176492179135,0.724752362478018,1.15212002503146,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0.549454872801795,0.214368379079066,0,1.12950368523413,2.30162618253588,1.71868654031819,1.54667864109319,0,0.755393897389701,0,0.45032120322422,1.35942722695261,3.62432218226274,0.415149390336707,1.99512436700516,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.888986911206461,1.64828045791115,1.28367683836726,0.758091635291392,1.52087579934144,0.943131706930381,1.49826411951812,1.28050304809739,0.976402972245426,2.38146845641537,0.811190281613988,1.15745532278223,0.824171801606613,1.76638704161277,1.37147700954166,0.887379030796687,1.43061713968393,1.16277133305863,1.12931256498397,0.930760686808441,0.914639864363863,1.05227884575137,0.814824683075171,1.12228454331548,1.18635018124174,1.0835493061312,1.22769312950907,0.464810523557898,0.578719832943424,0.499621155875892,1.16965804222704,0,0,0.441182838239031,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0.515672092277442,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.07379224616955,2.02508907497536,1.68259969081106,1.14260393761521,1.10434270475807,0.61245399607477,1.24599112323707,1.83843757322004,1.10115880999389,0.638436690425939,0.614426133024974,2.2420668914133,0.914876436024097,1.04182674111352,0,0,0.45839474333043,0.589257170947335,0.569486723196412,1.86399445825301,0,0,0.579728977403356,0,0,0,0,0.448026887097336,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.693941307064543,0.608930956624282,0,0.753613202763113,1.05829836422134,0.251333182659351,0,0.433798070759735,0,1.13236794963186,0.441683036920787,0,0,3.51336956413857,5.44561437714983,0.255457055208591,0,0,0,1.19832511523858,0.915001205637253,1.13088916901578,2.08589184230732,1.27857728665165,0.41557608911912,1.62241263067758,0.509196819251581,0.746441823660558,0.252722758433675,0.841767423545896,0.520481771850815,0.919608417733892,1.0803727788321,0.30140963567143,1.36072998302656,1.40925092313335,1.21812241927647,1.55222022443409,1.29340795759705,1.89106080167819,1.93546236580344,0,1.39023624612799,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.900310307305074,0.946978942340841,0.787056926989615,0.462801338662135,0.465067889500816,1.3413670069981,0.700592054203017,0.329119699826961,1.14917224855367,0.486412857275134,0.584799949701329,1.09775057645525,0.402619256281115,2.10289948564127,2.57261530948211,0,0.264450566663544,0.639864751605702,1.16118335930219,0.644337306610467,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,1.14248512609729,0,1.4255592949172,0.387904974335251,1.05203729835478,0.505892296994058,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0.757965647081939,0.977789858652155,0.678980343100753,0.938760993154008,1.00503754465089,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.690739927463582,0.578596234326046,0,0,0.491764273019036,1.10374698521893,0.80275294993896,1.05490517932983,0,0,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,2.00518806674155,0.566153061577665,1.21443210502468,1.75353514746787,2.37172666767914,5.14114106274891,0.567760340833074,0.534196811001766,0.651547837414304,0.494910368917606,0,0,0,0.565815239267694,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.04263763452273,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.535106452806212,0.822745103010605,0,0,0.63549621259146,0,0.16488625294148,0.322928853391811,0.422190474497091,0.716234064018819,0.492422699235184,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0.228778173206523,0,0,0,0,1.26534397432454,0.813277868507395,0.648032044930808,0.836353184057875,0.436725127492355,0.674321731924103,0.826534557253359,0,0.259229946583586,0.621339313086926,0.56369293868419,0.747582730219894,0.496375471371293,0.972255941720238,0.904118764344118,1.18269287843545,0.938857909166032,1.8228613878153,2.41176492179135,0.724752362478018,1.15212002503146,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0.549454872801795,0.214368379079066,0,1.12950368523413,2.30162618253588,1.71868654031819,1.54667864109319,0,0.755393897389701,0,0.45032120322422,1.35942722695261,3.62432218226274,0.415149390336707,1.99512436700516,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.888986911206461,1.64828045791115,1.28367683836726,0.758091635291392,1.52087579934144,0.943131706930381,1.49826411951812,1.28050304809739,0.976402972245426,2.38146845641537,0.811190281613988,1.15745532278223,0.824171801606613,1.76638704161277,1.37147700954166,0.887379030796687,1.43061713968393,1.16277133305863,1.12931256498397,0.930760686808441,0.914639864363863,1.05227884575137,0.814824683075171,1.12228454331548,1.18635018124174,1.0835493061312,1.22769312950907,0.464810523557898,0.578719832943424,0.499621155875892,1.16965804222704,0,0,0.441182838239031,0.231867835620421 | ||
|short_description=p14@Auts2 | |short_description=p14@Auts2 | ||
}} | }} |
Revision as of 17:46, 14 November 2012
Short description: | p14@Auts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Auts2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2415 |
Association with transcript: | -19bp_to_ENSMUST00000161226_5end |
EntrezGene: | Auts2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.57e-11 | 73 |
neurectoderm | 1.50e-10 | 64 |
neural plate | 1.50e-10 | 64 |
presumptive neural plate | 1.50e-10 | 64 |
nervous system | 2.41e-10 | 75 |
brain | 5.00e-10 | 47 |
future brain | 5.00e-10 | 47 |
ectoderm-derived structure | 5.13e-10 | 95 |
ectoderm | 5.13e-10 | 95 |
presumptive ectoderm | 5.13e-10 | 95 |
regional part of nervous system | 5.19e-10 | 54 |
neural tube | 7.08e-10 | 52 |
neural rod | 7.08e-10 | 52 |
future spinal cord | 7.08e-10 | 52 |
neural keel | 7.08e-10 | 52 |
pre-chordal neural plate | 9.64e-10 | 49 |
gray matter | 2.11e-09 | 34 |
regional part of brain | 3.45e-09 | 46 |
cerebral cortex | 3.46e-09 | 21 |
cerebral hemisphere | 3.46e-09 | 21 |
pallium | 3.46e-09 | 21 |
ecto-epithelium | 8.68e-09 | 73 |
brain grey matter | 1.94e-08 | 29 |
regional part of telencephalon | 1.94e-08 | 29 |
telencephalon | 1.94e-08 | 29 |
anterior neural tube | 3.52e-08 | 40 |
regional part of forebrain | 1.26e-07 | 39 |
forebrain | 1.26e-07 | 39 |
future forebrain | 1.26e-07 | 39 |
structure with developmental contribution from neural crest | 9.24e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.