FFCP PHASE1:Mm9::chr6:96307078..96307100,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:96307078..96307100,+ | |id=chr6:96307078..96307100,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.94e-21!10;UBERON:0000411!9.94e-21!10;UBERON:0001950!9.94e-21!10;UBERON:0002020!2.40e-15!34;UBERON:0003056!9.33e-15!49;UBERON:0002619!1.48e-13!17;UBERON:0002791!7.32e-13!29;UBERON:0003528!7.32e-13!29;UBERON:0001893!7.32e-13!29;UBERON:0002346!1.36e-12!71;UBERON:0003075!1.36e-12!71;UBERON:0007284!1.36e-12!71;UBERON:0000956!1.70e-12!21;UBERON:0001869!1.70e-12!21;UBERON:0000203!1.70e-12!21;UBERON:0003080!2.85e-12!40;UBERON:0001049!5.82e-12!52;UBERON:0005068!5.82e-12!52;UBERON:0006241!5.82e-12!52;UBERON:0007135!5.82e-12!52;UBERON:0000033!2.21e-11!63;UBERON:0002780!2.66e-11!39;UBERON:0001890!2.66e-11!39;UBERON:0006240!2.66e-11!39;UBERON:0000955!4.10e-10!50;UBERON:0006238!4.10e-10!50;UBERON:0002616!3.78e-09!49;UBERON:0007811!2.80e-08!86;UBERON:0001017!6.68e-08!73;UBERON:0005743!6.68e-08!73;UBERON:0004121!1.44e-07!102;UBERON:0000924!1.44e-07!102;UBERON:0006601!1.44e-07!102;UBERON:0000073!1.52e-07!75;UBERON:0001016!1.52e-07!75;UBERON:0000153!4.73e-07!94 | |ontology_enrichment_uberon=UBERON:0002021!9.94e-21!10;UBERON:0000411!9.94e-21!10;UBERON:0001950!9.94e-21!10;UBERON:0002020!2.40e-15!34;UBERON:0003056!9.33e-15!49;UBERON:0002619!1.48e-13!17;UBERON:0002791!7.32e-13!29;UBERON:0003528!7.32e-13!29;UBERON:0001893!7.32e-13!29;UBERON:0002346!1.36e-12!71;UBERON:0003075!1.36e-12!71;UBERON:0007284!1.36e-12!71;UBERON:0000956!1.70e-12!21;UBERON:0001869!1.70e-12!21;UBERON:0000203!1.70e-12!21;UBERON:0003080!2.85e-12!40;UBERON:0001049!5.82e-12!52;UBERON:0005068!5.82e-12!52;UBERON:0006241!5.82e-12!52;UBERON:0007135!5.82e-12!52;UBERON:0000033!2.21e-11!63;UBERON:0002780!2.66e-11!39;UBERON:0001890!2.66e-11!39;UBERON:0006240!2.66e-11!39;UBERON:0000955!4.10e-10!50;UBERON:0006238!4.10e-10!50;UBERON:0002616!3.78e-09!49;UBERON:0007811!2.80e-08!86;UBERON:0001017!6.68e-08!73;UBERON:0005743!6.68e-08!73;UBERON:0004121!1.44e-07!102;UBERON:0000924!1.44e-07!102;UBERON:0006601!1.44e-07!102;UBERON:0000073!1.52e-07!75;UBERON:0001016!1.52e-07!75;UBERON:0000153!4.73e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.77e-52,10;UBERON:0000411,2.77e-52,10;UBERON:0001950,2.77e-52,10;UBERON:0002619,4.81e-31,17;UBERON:0000956,3.00e-25,21;UBERON:0001869,3.00e-25,21;UBERON:0000203,3.00e-25,21;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002020,8.43e-16,34;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0.408218994907967,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,7.56154002312225,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0.408218994907967,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,7.56154002312225,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:96307078..96307100,+ | |short_description=p@chr6:96307078..96307100,+ | ||
}} | }} |
Revision as of 06:10, 15 November 2012
Short description: | p@chr6:96307078..96307100, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:96307078..96307100, + |
Coexpression cluster: | MCL_coexpression_mm9:236 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.77e-52 | 10 |
visual cortex | 2.77e-52 | 10 |
neocortex | 2.77e-52 | 10 |
regional part of cerebral cortex | 4.81e-31 | 17 |
cerebral cortex | 3.00e-25 | 21 |
cerebral hemisphere | 3.00e-25 | 21 |
pallium | 3.00e-25 | 21 |
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
gray matter | 8.43e-16 | 34 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.