FFCP PHASE1:Hg19::chr6:2876650..2876678,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!1.73e-13!24;CL:0000860!1.19e-12!45;CL:0000557!3.54e-12!71;CL:0000766!9.74e-12!76;CL:0000115!1.08e-11!35;CL:0002057!4.62e-11!42;CL:0002009!1.35e-10!65;CL:0000839!3.80e-10!70;CL:0002194!7.86e-10!63;CL:0000576!7.86e-10!63;CL:0000040!7.86e-10!63;CL:0000559!7.86e-10!63;CL:0000071!1.03e-09!18;CL:0002546!1.03e-09!18;CL:0002078!2.59e-09!44;CL:0000213!5.21e-08!57;CL:0000215!5.21e-08!57 | |ontology_enrichment_celltype=CL:0002139!1.73e-13!24;CL:0000860!1.19e-12!45;CL:0000557!3.54e-12!71;CL:0000766!9.74e-12!76;CL:0000115!1.08e-11!35;CL:0002057!4.62e-11!42;CL:0002009!1.35e-10!65;CL:0000839!3.80e-10!70;CL:0002194!7.86e-10!63;CL:0000576!7.86e-10!63;CL:0000040!7.86e-10!63;CL:0000559!7.86e-10!63;CL:0000071!1.03e-09!18;CL:0002546!1.03e-09!18;CL:0002078!2.59e-09!44;CL:0000213!5.21e-08!57;CL:0000215!5.21e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.74e-20;24!CL:0000860;6.00e-14;33!CL:0002057;6.00e-14;33!CL:0000071;7.53e-14;18!CL:0000115;2.54e-12;36!CL:0000473;3.35e-09;39!CL:0000234;3.35e-09;39!CL:0002078;7.76e-09;45!CL:0002138;1.80e-08;6!CL:0000576;3.76e-08;48 | |ontology_enrichment_celltype_v019=CL:0002139;1.74e-20;24!CL:0000860;6.00e-14;33!CL:0002057;6.00e-14;33!CL:0000071;7.53e-14;18!CL:0000115;2.54e-12;36!CL:0000473;3.35e-09;39!CL:0000234;3.35e-09;39!CL:0002078;7.76e-09;45!CL:0002138;1.80e-08;6!CL:0000576;3.76e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.18e-21,24;CL:0000115,7.57e-16,36;CL:0000071,3.77e-14,18;CL:0002546,3.77e-14,18;CL:0000860,3.86e-13,42;CL:0002057,3.86e-13,42;CL:0000557,8.24e-13,67;CL:0002078,1.63e-12,45;CL:0000766,4.07e-12,72;CL:0000839,4.33e-11,66;CL:0000213,9.34e-11,58;CL:0000215,9.34e-11,58;CL:0000473,1.38e-10,48;CL:0000234,1.38e-10,48;CL:0002009,6.00e-10,61;CL:0002194,1.89e-09,59;CL:0000576,1.89e-09,59;CL:0000040,1.89e-09,59;CL:0000559,1.89e-09,59;CL:0005020,5.64e-09,6;CL:0002138,5.64e-09,6;CL:0005022,5.64e-09,6;CL:0000222,1.82e-08,121;CL:0000763,2.31e-07,108;CL:0000049,2.31e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002546;7.53e-14;18!CL:0002057;2.55e-10;42!CL:0005022;1.80e-08;6 | |ontology_enrichment_development_v019=CL:0002546;7.53e-14;18!CL:0002057;2.55e-10;42!CL:0005022;1.80e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.11e-12!115;UBERON:0002193!3.57e-11!112;UBERON:0000477!4.62e-11!286;UBERON:0001986!1.03e-09!18;UBERON:0004638!1.03e-09!18;UBERON:0004852!1.03e-09!18;UBERON:0007023!1.47e-09!115;UBERON:0002371!2.68e-09!80;UBERON:0000926!8.25e-09!448;UBERON:0004120!8.25e-09!448;UBERON:0006603!8.25e-09!448;UBERON:0003081!8.70e-09!216;UBERON:0000467!9.93e-09!625;UBERON:0000480!1.42e-08!626;UBERON:0002390!2.73e-08!102;UBERON:0003061!2.73e-08!102;UBERON:0000468!2.89e-08!659;UBERON:0001009!3.42e-08!113;UBERON:0000487!3.52e-08!22;UBERON:0004111!4.09e-08!241;UBERON:0004535!5.61e-08!110;UBERON:0000922!6.09e-08!612;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000923!2.25e-07!604;UBERON:0005291!2.25e-07!604;UBERON:0006598!2.25e-07!604;UBERON:0002532!2.25e-07!604;UBERON:0001474!2.58e-07!86;UBERON:0006914!4.67e-07!25;UBERON:0002049!4.80e-07!79;UBERON:0007798!4.80e-07!79 | |ontology_enrichment_uberon=UBERON:0002405!5.11e-12!115;UBERON:0002193!3.57e-11!112;UBERON:0000477!4.62e-11!286;UBERON:0001986!1.03e-09!18;UBERON:0004638!1.03e-09!18;UBERON:0004852!1.03e-09!18;UBERON:0007023!1.47e-09!115;UBERON:0002371!2.68e-09!80;UBERON:0000926!8.25e-09!448;UBERON:0004120!8.25e-09!448;UBERON:0006603!8.25e-09!448;UBERON:0003081!8.70e-09!216;UBERON:0000467!9.93e-09!625;UBERON:0000480!1.42e-08!626;UBERON:0002390!2.73e-08!102;UBERON:0003061!2.73e-08!102;UBERON:0000468!2.89e-08!659;UBERON:0001009!3.42e-08!113;UBERON:0000487!3.52e-08!22;UBERON:0004111!4.09e-08!241;UBERON:0004535!5.61e-08!110;UBERON:0000922!6.09e-08!612;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000923!2.25e-07!604;UBERON:0005291!2.25e-07!604;UBERON:0006598!2.25e-07!604;UBERON:0002532!2.25e-07!604;UBERON:0001474!2.58e-07!86;UBERON:0006914!4.67e-07!25;UBERON:0002049!4.80e-07!79;UBERON:0007798!4.80e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.53e-14;18!UBERON:0001986;7.53e-14;18!UBERON:0004852;7.53e-14;18!UBERON:0000487;4.89e-12;22!UBERON:0006914;4.84e-10;25!UBERON:0001473;5.97e-08;8!UBERON:0004536;5.97e-08;8!UBERON:0006558;5.97e-08;8!UBERON:0002465;9.73e-08;10!UBERON:0000055;2.34e-07;65!UBERON:0000490;2.76e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004638;7.53e-14;18!UBERON:0001986;7.53e-14;18!UBERON:0004852;7.53e-14;18!UBERON:0000487;4.89e-12;22!UBERON:0006914;4.84e-10;25!UBERON:0001473;5.97e-08;8!UBERON:0004536;5.97e-08;8!UBERON:0006558;5.97e-08;8!UBERON:0002465;9.73e-08;10!UBERON:0000055;2.34e-07;65!UBERON:0000490;2.76e-07;33 | ||
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|phase1_expression=0.181678379270557,1.49870366723688,0,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.764134057479513,0.410502947249729,0.865818594450472,0.393364276848904,0.383829398097213,1.08371286321253,0,0,0,0,0,0.293600439334847,1.10799081706375,1.20326668482085,0.651032612147555,1.11957737119962,0.971680998056939,1.54545340580512,1.59938062657521,4.91238726795452,0.242584061187816,2.55671940596253,0,0.309706370895104,2.01384674625505,2.81776777182011,0.709446689665756,3.10271112662957,1.93645405075148,1.35426486594342,2.07066573496865,3.0019676506363,0.674170453335254,4.59125838556354,2.24650318953266,3.19668562899521,1.9791078011203,2.19410023383795,0.852449501065388,2.03146467040009,4.53908179752912,2.4912889959823,1.25624332628372,1.5644487552606,0.217188844705117,3.63239701580021,4.05105399586321,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0.39783335439818,0.365328307529268,0,1.09227722252426,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0.637130828648193,0.651083453856419,0,0,0.127986611154418,3.74792179657038,1.18388626022008,0.821127996921047,0,0.267440195783507,0.144824403882799,2.43806866313962,8.04841031644363,1.66221330396589,0.361439152384566,0,1.01392563272577,0,0.973269740605272,0.661743720148475,0,0.790513071238134,1.70272798147026,0,0,0.324547393654683,0.348259474598534,0.664789802594326,1.43094374583205,0.571994910780128,0.371457501329565,4.17401055470081,4.30117297553062,0.694281003215189,2.26123176769604,3.77549492588915,7.70330517432189,0.208994966536811,1.8089173141853,1.77883131343355,2.34304428935269,4.02829317109147,6.84244895146661,1.46437234528902,0,3.24056779152704,4.64358587077215,1.57170560838319,4.61707069981621,1.53316637465883,0.949265659568129,2.74802615895611,2.63560834872127,0,0,0,0.12663051166458,1.32409180813219,1.43418310374407,2.12801029319014,0,0,0.24666754841716,1.24484414159907,0.404132016209064,1.63461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,0.352303495931295,0,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0.484938170456436,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0.132529768321485,0.348581828608555,0.10366105501537,0.504641701751257,0,1.56449532329816,0.643240938192885,2.76269842704961,0,0,0.828147600278907,1.34867752062481,0.482022059766964,1.7647035637183,0.871517776369625,1.66089433377768,1.34831308160164,1.37355025587742,1.53898862778556,0,1.40241773803446,0,0,0,1.96565443335525,0,0,0.122988438543114,1.20097467208968,0,0,0,0,0.325808305310325,1.03993478527958,0,0.34779121492523,0.352226082707465,4.04226053731007,4.1668696131895,2.66355813128438,0,0,0.738651018262192,0,0.445893486866185,0,0,0,0,0,0,0,1.40877494421162,1.65862492432618,1.29707958075265,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0,0,0,1.71573592389777,0.542621605391443,0.823240336780769,0.325736184293735,1.06617584622764,0,0.301439377059586,2.61460037580088,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0.500170521059677,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.604297247958111,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.462092022626489,1.56869953835371,2.92278449306521,3.0609972378934,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,3.48014585851639,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,3.11612124763581,0,0,0,0,0,0,0,2.15623506123262,0,0,0.37064843820784,0,1.116475108079,0.316379424718726,0.38126038784765,0,0,1.27281299170375,0,1.07923474549989,1.37268514868027,0.353437207037059,0,0,1.26377536871694,0,3.41198885483798,0,0,0.282810863907425,0,0,0,0,0.578775534266688,1.31178950409327,0.405820753925408,0.30982349809975,0.281695602532241,0,0,1.426684205925,0.354761064070598,0.844430541190656,0,0.75894634753143,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.952927101831156,0.822724546172388,0,0,1.58625035258854,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.851692475380653,0.687010689511529,0,0,0,0,0,0,0,0,0,0.561421621224659,1.46508179271894,0,0,1.42068073403207,0,0,0,0,0.703347082052564,0.111308705022906,0,0,1.19548792950642,0.276283915531148,0,0,1.35393286007176,0,0.9885518626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| ||
|short_description=p1@MGC39372 | |short_description=p1@MGC39372 | ||
}} | }} |
Revision as of 00:19, 16 November 2012
Short description: | p1@MGC39372 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MGC39372_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000420981, ENST00000545177, NR_033851, uc003mud.2_5end |
EntrezGene: | MGC39372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.18e-21 | 24 |
endothelial cell | 7.57e-16 | 36 |
blood vessel endothelial cell | 3.77e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.77e-14 | 18 |
classical monocyte | 3.86e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-13 | 42 |
granulocyte monocyte progenitor cell | 8.24e-13 | 67 |
meso-epithelial cell | 1.63e-12 | 45 |
myeloid leukocyte | 4.07e-12 | 72 |
myeloid lineage restricted progenitor cell | 4.33e-11 | 66 |
lining cell | 9.34e-11 | 58 |
barrier cell | 9.34e-11 | 58 |
defensive cell | 1.38e-10 | 48 |
phagocyte | 1.38e-10 | 48 |
macrophage dendritic cell progenitor | 6.00e-10 | 61 |
monopoietic cell | 1.89e-09 | 59 |
monocyte | 1.89e-09 | 59 |
monoblast | 1.89e-09 | 59 |
promonocyte | 1.89e-09 | 59 |
lymphangioblast | 5.64e-09 | 6 |
endothelial cell of lymphatic vessel | 5.64e-09 | 6 |
vascular lymphangioblast | 5.64e-09 | 6 |
mesodermal cell | 1.82e-08 | 121 |
myeloid cell | 2.31e-07 | 108 |
common myeloid progenitor | 2.31e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.13e-15 | 93 |
blood vessel endothelium | 3.77e-14 | 18 |
endothelium | 3.77e-14 | 18 |
cardiovascular system endothelium | 3.77e-14 | 18 |
hemolymphoid system | 1.07e-12 | 108 |
simple squamous epithelium | 2.63e-12 | 22 |
lateral plate mesoderm | 1.71e-11 | 203 |
vessel | 2.43e-11 | 68 |
squamous epithelium | 2.86e-10 | 25 |
bone marrow | 3.38e-10 | 76 |
vasculature | 3.80e-10 | 78 |
vascular system | 3.80e-10 | 78 |
cardiovascular system | 1.81e-09 | 109 |
epithelial tube | 1.83e-09 | 117 |
circulatory system | 6.34e-09 | 112 |
bone element | 8.34e-09 | 82 |
hematopoietic system | 1.53e-08 | 98 |
blood island | 1.53e-08 | 98 |
lymphatic vessel | 2.04e-08 | 8 |
lymph vasculature | 2.04e-08 | 8 |
lymphatic part of lymphoid system | 2.04e-08 | 8 |
splanchnic layer of lateral plate mesoderm | 2.82e-08 | 83 |
lymphoid system | 5.02e-08 | 10 |
skeletal element | 2.82e-07 | 90 |
epithelial tube open at both ends | 2.85e-07 | 59 |
blood vessel | 2.85e-07 | 59 |
blood vasculature | 2.85e-07 | 59 |
vascular cord | 2.85e-07 | 59 |
mesoderm | 3.52e-07 | 315 |
mesoderm-derived structure | 3.52e-07 | 315 |
presumptive mesoderm | 3.52e-07 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.