FFCP PHASE1:Hg19::chr12:7060414..7060423,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!4.57e-47!172;CL:0000566!4.57e-47!172;CL:0002032!3.76e-44!165;CL:0000837!3.76e-44!165;CL:0000988!5.72e-43!182;CL:0000738!1.06e-42!140;CL:0002031!4.67e-37!124;CL:0002087!3.27e-35!119;CL:0000084!4.69e-29!25;CL:0000827!4.69e-29!25;CL:0000542!6.94e-28!53;CL:0000051!6.94e-28!53;CL:0000838!6.29e-27!52;CL:0000791!7.93e-27!18;CL:0000789!7.93e-27!18;CL:0002420!7.93e-27!18;CL:0002419!7.93e-27!18;CL:0000790!7.93e-27!18;CL:0000763!8.63e-18!112;CL:0000049!8.63e-18!112;CL:0000625!3.58e-17!11;CL:0000766!2.31e-13!76;CL:0000839!5.17e-12!70;CL:0000557!1.01e-11!71;CL:0000624!1.35e-10!6;CL:0000134!1.64e-09!358;CL:0002320!6.49e-09!365;CL:0002009!1.44e-08!65;CL:0002194!2.86e-08!63;CL:0000576!2.86e-08!63;CL:0000040!2.86e-08!63;CL:0000559!2.86e-08!63;CL:0002057!4.57e-08!42;CL:0002274!9.74e-08!5;CL:0000457!9.74e-08!5;CL:0002191!9.74e-08!5;CL:0000097!9.74e-08!5;CL:0000831!9.74e-08!5;CL:0002028!9.74e-08!5;CL:0000860!3.41e-07!45;CL:0000219!7.11e-07!390 | |ontology_enrichment_celltype=CL:0000037!4.57e-47!172;CL:0000566!4.57e-47!172;CL:0002032!3.76e-44!165;CL:0000837!3.76e-44!165;CL:0000988!5.72e-43!182;CL:0000738!1.06e-42!140;CL:0002031!4.67e-37!124;CL:0002087!3.27e-35!119;CL:0000084!4.69e-29!25;CL:0000827!4.69e-29!25;CL:0000542!6.94e-28!53;CL:0000051!6.94e-28!53;CL:0000838!6.29e-27!52;CL:0000791!7.93e-27!18;CL:0000789!7.93e-27!18;CL:0002420!7.93e-27!18;CL:0002419!7.93e-27!18;CL:0000790!7.93e-27!18;CL:0000763!8.63e-18!112;CL:0000049!8.63e-18!112;CL:0000625!3.58e-17!11;CL:0000766!2.31e-13!76;CL:0000839!5.17e-12!70;CL:0000557!1.01e-11!71;CL:0000624!1.35e-10!6;CL:0000134!1.64e-09!358;CL:0002320!6.49e-09!365;CL:0002009!1.44e-08!65;CL:0002194!2.86e-08!63;CL:0000576!2.86e-08!63;CL:0000040!2.86e-08!63;CL:0000559!2.86e-08!63;CL:0002057!4.57e-08!42;CL:0002274!9.74e-08!5;CL:0000457!9.74e-08!5;CL:0002191!9.74e-08!5;CL:0000097!9.74e-08!5;CL:0000831!9.74e-08!5;CL:0002028!9.74e-08!5;CL:0000860!3.41e-07!45;CL:0000219!7.11e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.17e-50;18!CL:0000789;1.17e-50;18!CL:0002419;1.17e-50;18!CL:0000084;9.95e-45;25!CL:0000625;1.93e-32;11!CL:0000624;3.75e-23;6!CL:0000542;5.02e-13;53!CL:0000898;5.92e-13;3!CL:0000815;3.71e-09;2!CL:0000792;3.71e-09;2!CL:0002677;3.71e-09;2 | |ontology_enrichment_celltype_v019=CL:0000791;1.17e-50;18!CL:0000789;1.17e-50;18!CL:0002419;1.17e-50;18!CL:0000084;9.95e-45;25!CL:0000625;1.93e-32;11!CL:0000624;3.75e-23;6!CL:0000542;5.02e-13;53!CL:0000898;5.92e-13;3!CL:0000815;3.71e-09;2!CL:0000792;3.71e-09;2!CL:0002677;3.71e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.71e-51,18;CL:0000789,4.71e-51,18;CL:0002420,4.71e-51,18;CL:0002419,4.71e-51,18;CL:0000790,4.71e-51,18;CL:0000084,6.84e-45,25;CL:0000827,6.84e-45,25;CL:0000625,7.62e-33,11;CL:0000838,1.68e-26,52;CL:0000542,6.70e-26,53;CL:0000051,6.70e-26,53;CL:0000624,3.80e-23,6;CL:0000738,5.22e-13,136;CL:0000898,6.44e-13,3;CL:0002031,1.20e-11,120;CL:0002087,3.30e-11,115;CL:0000037,2.54e-10,168;CL:0000988,1.79e-09,177;CL:0002032,4.14e-09,161;CL:0000837,4.14e-09,161;CL:0000815,4.19e-09,2;CL:0000792,4.19e-09,2;CL:0002677,4.19e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-50;18!CL:0000051;5.02e-13;53 | |ontology_enrichment_development_v019=CL:0000790;1.17e-50;18!CL:0000051;5.02e-13;53 | ||
|ontology_enrichment_disease=DOID:2531!1.78e-08!51;DOID:0060083!1.78e-08!51;DOID:1240!1.96e-07!39 | |ontology_enrichment_disease=DOID:2531!1.78e-08!51;DOID:0060083!1.78e-08!51;DOID:1240!1.96e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-21!102;UBERON:0003061!1.02e-21!102;UBERON:0002193!1.42e-20!112;UBERON:0000178!5.55e-11!15;UBERON:0000179!5.55e-11!15;UBERON:0000463!5.55e-11!15;UBERON:0002371!1.95e-09!80;UBERON:0002405!2.37e-09!115;UBERON:0004177!2.66e-09!7;UBERON:0002384!1.70e-08!375;UBERON:0001474!3.32e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!1.02e-21!102;UBERON:0003061!1.02e-21!102;UBERON:0002193!1.42e-20!112;UBERON:0000178!5.55e-11!15;UBERON:0000179!5.55e-11!15;UBERON:0000463!5.55e-11!15;UBERON:0002371!1.95e-09!80;UBERON:0002405!2.37e-09!115;UBERON:0004177!2.66e-09!7;UBERON:0002384!1.70e-08!375;UBERON:0001474!3.32e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-14;15!UBERON:0000179;1.42e-14;15!UBERON:0000463;1.42e-14;15!UBERON:0002390;6.59e-09;32!UBERON:0002370;4.86e-08;2!UBERON:0005058;4.86e-08;2!UBERON:0009113;4.86e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-14;15!UBERON:0000179;1.42e-14;15!UBERON:0000463;1.42e-14;15!UBERON:0002390;6.59e-09;32!UBERON:0002370;4.86e-08;2!UBERON:0005058;4.86e-08;2!UBERON:0009113;4.86e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.56e-14,15;UBERON:0000179,2.56e-14,15;UBERON:0000463,2.56e-14,15;UBERON:0002370,5.45e-09,4;UBERON:0005058,5.45e-09,4;UBERON:0009113,5.45e-09,4;UBERON:0003295,5.45e-09,4;UBERON:0005562,5.45e-09,4 | |||
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|short_description=p9@PTPN6 | |short_description=p9@PTPN6 | ||
}} | }} |
Revision as of 09:20, 19 November 2012
Short description: | p9@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PTPN6_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -1bp_to_ENST00000538715_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | F5H0N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.71e-51 | 18 |
alpha-beta T cell | 4.71e-51 | 18 |
immature T cell | 4.71e-51 | 18 |
mature T cell | 4.71e-51 | 18 |
immature alpha-beta T cell | 4.71e-51 | 18 |
T cell | 6.84e-45 | 25 |
pro-T cell | 6.84e-45 | 25 |
CD8-positive, alpha-beta T cell | 7.62e-33 | 11 |
lymphoid lineage restricted progenitor cell | 1.68e-26 | 52 |
lymphocyte | 6.70e-26 | 53 |
common lymphoid progenitor | 6.70e-26 | 53 |
CD4-positive, alpha-beta T cell | 3.80e-23 | 6 |
leukocyte | 5.22e-13 | 136 |
naive T cell | 6.44e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 1.20e-11 | 120 |
nongranular leukocyte | 3.30e-11 | 115 |
hematopoietic stem cell | 2.54e-10 | 168 |
hematopoietic cell | 1.79e-09 | 177 |
hematopoietic oligopotent progenitor cell | 4.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.14e-09 | 161 |
regulatory T cell | 4.19e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.19e-09 | 2 |
naive regulatory T cell | 4.19e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.56e-14 | 15 |
haemolymphatic fluid | 2.56e-14 | 15 |
organism substance | 2.56e-14 | 15 |
thymus | 5.45e-09 | 4 |
hemolymphoid system gland | 5.45e-09 | 4 |
thymic region | 5.45e-09 | 4 |
pharyngeal gland | 5.45e-09 | 4 |
thymus primordium | 5.45e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.