FFCP PHASE1:Hg19::chr11:46333883..46333900,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=18856|TSSclassifier=S|UniProt=Q96BA8|association_with_transcript=5bp_to_AK075538_5end|description=CAGE_peak_8_at_CREB3L1_5end|id=chr11:46333883..46333900,+|ontology_enrichment_celltype=CL:0000055!4.24e-28!180;CL:0000057!2.92e-16!75;CL:0000680!1.83e-14!57;CL:0000056!1.83e-14!57;CL:0000355!1.83e-14!57;CL:0000183!3.06e-14!59;CL:0000187!8.62e-14!54;CL:0000192!5.30e-12!42;CL:0000514!5.30e-12!42;CL:0000393!6.83e-12!60;CL:0000211!6.83e-12!60;CL:0000048!1.93e-10!430;CL:0000723!1.08e-09!436;CL:0000034!1.32e-09!444;CL:0002620!8.83e-09!23;CL:0002371!2.60e-08!591;CL:0000144!3.22e-08!625;CL:0002570!3.71e-07!8;CL:0000359!5.72e-07!32|ontology_enrichment_celltype_v019=CL:0000134;3.76e-09;55!CL:0002622;5.94e-09;3!CL:0002570;3.97e-08;8!CL:0000048;2.09e-07;58!CL:0000723;2.49e-07;61!CL:0000197;3.94e-07;6!CL:0000098;3.94e-07;6!CL:0002167;3.94e-07;6!CL:0002569;4.45e-07;6|ontology_enrichment_celltype_v019_2=CL:0002622,5.10e-09,3;CL:0000048,7.66e-09,427;CL:0000723,1.62e-08,433;CL:0002570,1.74e-08,8;CL:0000192,3.20e-08,43;CL:0000514,3.20e-08,43;CL:0000034,4.27e-08,441;CL:0000197,2.23e-07,6;CL:0000098,2.23e-07,6;CL:0002167,2.23e-07,6;CL:0002569,6.13e-07,6;CL:0000057,8.29e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!6.17e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.87e-18!83;UBERON:0002329!1.87e-18!83;UBERON:0003077!1.87e-18!83;UBERON:0003059!1.87e-18!83;UBERON:0007282!1.87e-18!83;UBERON:0009618!1.87e-18!83;UBERON:0007285!1.87e-18!83;UBERON:0004290!8.41e-16!70;UBERON:0001134!1.21e-13!61;UBERON:0002036!1.21e-13!61;UBERON:0003082!1.21e-13!61;UBERON:0002385!1.87e-13!63;UBERON:0001015!1.87e-13!63;UBERON:0000383!1.87e-13!63;UBERON:0000486!3.75e-13!82;UBERON:0005256!1.27e-12!143;UBERON:0003102!6.20e-08!95;UBERON:0002100!8.54e-08!216;UBERON:0003104!6.77e-07!238;UBERON:0009142!6.77e-07!238;UBERON:0000475!9.80e-07!365|ontology_enrichment_uberon_v019=UBERON:0003104;5.25e-09;7!UBERON:0009142;5.25e-09;7!UBERON:0003422;4.45e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.64e-09,99;UBERON:0007524,1.24e-07,73;UBERON:0002199,3.76e-07,46;UBERON:0002416,3.76e-07,46;UBERON:0002329,5.89e-07,71;UBERON:0003059,5.89e-07,71;UBERON:0007282,5.89e-07,71;UBERON:0004290,5.89e-07,71;UBERON:0009618,5.89e-07,71;UBERON:0003422,6.13e-07,6;UBERON:0003077,8.37e-07,72;UBERON:0007285,8.37e-07,72|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.618831764800233,0.994192127183747,2.01697543935533,1.80808358407193,0,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,1.88300474649071,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0,1.14734648299525,0,0,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0.302714855289863,0,0.937285727335186,0,1.1409436430889,0.298897361103602,0.23486899728753,0.323745888736263,0.421352420106746,0,0.737005903870608,0.206651562351531,1.18800285728205,1.97813543422845,1.82032272387605,2.15585442544872,0.336672227908132,0.125118519871964,0,0,1.22595118319608,0.600952235626387,0.567160915800105,0.717558542755448,1.2813443329114,0.423863802319124,0,0.824420233907511,0.515281080091258,0.930584281657949,1.0126579934476,1.65642908774038,1.51460264546469,0.276149695926898,1.77810662500693,0.710019185033229,1.10827308050404,1.01736355386293,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,0.587043471179108,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0.258543431515556,3.57656445851882,1.690605505112,0.797814349754612,1.04007436911366,1.28603687131071,0,0.799266537048298,1.71573592389777,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,1.19812427745791,2.29723871668228,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.736148950314839,1.00034104211935,0.813795071099207,1.24782516918484,6.24501460790066,1.73472656537328,1.63997980989798,0.601892199455438,0,0,1.99267679560631,0.737476674166813,0.434418072340414,1.17480694477644,0,0,0,0,0,3.328708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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18856 | |||
|TSSclassifier=S | |||
|UniProt=Q96BA8 | |||
|association_with_transcript=5bp_to_AK075538_5end | |||
|description=CAGE_peak_8_at_CREB3L1_5end | |||
|id=chr11:46333883..46333900,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.24e-28!180;CL:0000057!2.92e-16!75;CL:0000680!1.83e-14!57;CL:0000056!1.83e-14!57;CL:0000355!1.83e-14!57;CL:0000183!3.06e-14!59;CL:0000187!8.62e-14!54;CL:0000192!5.30e-12!42;CL:0000514!5.30e-12!42;CL:0000393!6.83e-12!60;CL:0000211!6.83e-12!60;CL:0000048!1.93e-10!430;CL:0000723!1.08e-09!436;CL:0000034!1.32e-09!444;CL:0002620!8.83e-09!23;CL:0002371!2.60e-08!591;CL:0000144!3.22e-08!625;CL:0002570!3.71e-07!8;CL:0000359!5.72e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.76e-09;55!CL:0002622;5.94e-09;3!CL:0002570;3.97e-08;8!CL:0000048;2.09e-07;58!CL:0000723;2.49e-07;61!CL:0000197;3.94e-07;6!CL:0000098;3.94e-07;6!CL:0002167;3.94e-07;6!CL:0002569;4.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,5.10e-09,3;CL:0000048,7.66e-09,427;CL:0000723,1.62e-08,433;CL:0002570,1.74e-08,8;CL:0000192,3.20e-08,43;CL:0000514,3.20e-08,43;CL:0000034,4.27e-08,441;CL:0000197,2.23e-07,6;CL:0000098,2.23e-07,6;CL:0002167,2.23e-07,6;CL:0002569,6.13e-07,6;CL:0000057,8.29e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.17e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.87e-18!83;UBERON:0002329!1.87e-18!83;UBERON:0003077!1.87e-18!83;UBERON:0003059!1.87e-18!83;UBERON:0007282!1.87e-18!83;UBERON:0009618!1.87e-18!83;UBERON:0007285!1.87e-18!83;UBERON:0004290!8.41e-16!70;UBERON:0001134!1.21e-13!61;UBERON:0002036!1.21e-13!61;UBERON:0003082!1.21e-13!61;UBERON:0002385!1.87e-13!63;UBERON:0001015!1.87e-13!63;UBERON:0000383!1.87e-13!63;UBERON:0000486!3.75e-13!82;UBERON:0005256!1.27e-12!143;UBERON:0003102!6.20e-08!95;UBERON:0002100!8.54e-08!216;UBERON:0003104!6.77e-07!238;UBERON:0009142!6.77e-07!238;UBERON:0000475!9.80e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;5.25e-09;7!UBERON:0009142;5.25e-09;7!UBERON:0003422;4.45e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.64e-09,99;UBERON:0007524,1.24e-07,73;UBERON:0002199,3.76e-07,46;UBERON:0002416,3.76e-07,46;UBERON:0002329,5.89e-07,71;UBERON:0003059,5.89e-07,71;UBERON:0007282,5.89e-07,71;UBERON:0004290,5.89e-07,71;UBERON:0009618,5.89e-07,71;UBERON:0003422,6.13e-07,6;UBERON:0003077,8.37e-07,72;UBERON:0007285,8.37e-07,72 | |||
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| |||
|short_description=p8@CREB3L1 | |||
}} |
Revision as of 17:53, 10 September 2013
Short description: | p8@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CREB3L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_AK075538_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | Q96BA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 5.10e-09 | 3 |
multi fate stem cell | 7.66e-09 | 427 |
somatic stem cell | 1.62e-08 | 433 |
mesenchymal stem cell of adipose | 1.74e-08 | 8 |
smooth muscle cell | 3.20e-08 | 43 |
smooth muscle myoblast | 3.20e-08 | 43 |
stem cell | 4.27e-08 | 441 |
receptor cell | 2.23e-07 | 6 |
sensory epithelial cell | 2.23e-07 | 6 |
olfactory epithelial cell | 2.23e-07 | 6 |
mesenchymal stem cell of umbilical cord | 6.13e-07 | 6 |
fibroblast | 8.29e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.64e-09 | 99 |
dense mesenchyme tissue | 1.24e-07 | 73 |
integument | 3.76e-07 | 46 |
integumental system | 3.76e-07 | 46 |
somite | 5.89e-07 | 71 |
presomitic mesoderm | 5.89e-07 | 71 |
presumptive segmental plate | 5.89e-07 | 71 |
dermomyotome | 5.89e-07 | 71 |
trunk paraxial mesoderm | 5.89e-07 | 71 |
mesenchyme of umbilical cord | 6.13e-07 | 6 |
paraxial mesoderm | 8.37e-07 | 72 |
presumptive paraxial mesoderm | 8.37e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.