FFCP PHASE1:Hg19::chr11:62009756..62009783,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10647|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18396|TSSclassifier=S|UniProt=O95969|association_with_transcript=32bp_to_NM_006551,uc001ntb.2_5end|coexpression_cluster_id=C101|description=CAGE_peak_1_at_SCGB1D2_5end|id=chr11:62009756..62009783,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;2.92e-11;7!CL:0000586;2.92e-11;7|ontology_enrichment_celltype_v019_2=CL:0000039,2.87e-11,7;CL:0000586,2.87e-11,7|ontology_enrichment_development_v019=UBERON:0009117;2.12e-13;10!UBERON:0005564;2.12e-13;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.25e-09;1!DOID:1357;1.25e-09;1|ontology_enrichment_disease_v019_2=DOID:0050619,9.70e-10,1;DOID:1357,9.70e-10,1|ontology_enrichment_uberon=UBERON:0007023!2.34e-55!115;UBERON:0001049!1.08e-28!57;UBERON:0005068!1.08e-28!57;UBERON:0006241!1.08e-28!57;UBERON:0007135!1.08e-28!57;UBERON:0002616!1.89e-25!59;UBERON:0000955!1.25e-21!69;UBERON:0006238!1.25e-21!69;UBERON:0003080!1.83e-20!42;UBERON:0003075!1.54e-19!86;UBERON:0007284!1.54e-19!86;UBERON:0002780!5.49e-19!41;UBERON:0001890!5.49e-19!41;UBERON:0006240!5.49e-19!41;UBERON:0002346!3.21e-18!90;UBERON:0001017!4.15e-18!82;UBERON:0005743!4.41e-18!86;UBERON:0000073!1.46e-16!94;UBERON:0001016!1.46e-16!94;UBERON:0000153!4.11e-16!129;UBERON:0007811!4.11e-16!129;UBERON:0002298!1.20e-15!8;UBERON:0000033!2.54e-15!123;UBERON:0003056!1.78e-14!61;UBERON:0002020!9.08e-14!34;UBERON:0003528!9.08e-14!34;UBERON:0001893!1.04e-13!34;UBERON:0002791!9.78e-13!33;UBERON:0003135!1.03e-11!11;UBERON:0001869!2.63e-11!32;UBERON:0004121!5.03e-11!169;UBERON:0000924!1.63e-10!173;UBERON:0006601!1.63e-10!173;UBERON:0002619!3.60e-10!22;UBERON:0004733!1.27e-09!12;UBERON:0002028!1.27e-09!12;UBERON:0007277!1.27e-09!12;UBERON:0003076!2.20e-09!15;UBERON:0003057!2.20e-09!15;UBERON:0000473!2.70e-09!8;UBERON:0004732!9.26e-09!13;UBERON:0000956!1.17e-08!25;UBERON:0000203!1.17e-08!25;UBERON:0003133!3.21e-08!48;UBERON:0001950!1.03e-07!20;UBERON:0000062!1.60e-07!511;UBERON:0006947!2.49e-07!3;UBERON:0004054!2.49e-07!3;UBERON:0001894!2.55e-07!7;UBERON:0006222!2.55e-07!7;UBERON:0001896!2.94e-07!3;UBERON:0005290!2.94e-07!3;UBERON:0010096!2.94e-07!3;UBERON:0004111!4.32e-07!241;UBERON:0002308!4.76e-07!9;UBERON:0000125!4.76e-07!9;UBERON:0000200!5.17e-07!6;UBERON:0005156!9.45e-07!59;UBERON:0000990!9.45e-07!59|ontology_enrichment_uberon_v019=UBERON:0003135;7.47e-27;11!UBERON:0000473;1.08e-16;8!UBERON:0003101;3.16e-13;22!UBERON:0000079;3.16e-13;22!UBERON:0006947;1.81e-12;3!UBERON:0004054;1.81e-12;3!UBERON:0001896;2.85e-12;3!UBERON:0005290;2.85e-12;3!UBERON:0001301;4.09e-10;1!UBERON:0001000;7.50e-10;1!UBERON:0001389;7.50e-10;1!UBERON:0000026;7.50e-10;1!UBERON:0008784;7.50e-10;1!UBERON:0006058;7.50e-10;1!UBERON:0003663;7.50e-10;1!UBERON:0004256;7.50e-10;1!UBERON:0004708;7.50e-10;1!UBERON:0002101;7.50e-10;1!UBERON:0004709;7.50e-10;1!UBERON:0002529;7.50e-10;1!UBERON:0010538;7.50e-10;1!UBERON:0003661;7.50e-10;1!UBERON:0010890;7.50e-10;1!UBERON:0002471;7.50e-10;1!UBERON:0001383;7.50e-10;1!UBERON:0010758;7.50e-10;1!UBERON:0010707;7.50e-10;1!UBERON:0000978;7.50e-10;1!UBERON:0002103;7.50e-10;1!UBERON:0005352;7.50e-10;1!UBERON:0001665;7.50e-10;1!UBERON:0003823;7.50e-10;1!UBERON:0000154;7.50e-10;1!UBERON:0010709;7.50e-10;1!UBERON:0005795;1.25e-09;1!UBERON:0001764;1.25e-09;1!UBERON:0001825;1.25e-09;1!UBERON:0005904;1.43e-09;4!UBERON:0003133;4.47e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.31e-27,11;UBERON:0000473,1.06e-16,8;UBERON:0003101,3.13e-13,22;UBERON:0000079,3.13e-13,22;UBERON:0006947,1.81e-12,3;UBERON:0004054,1.81e-12,3;UBERON:0001896,3.01e-12,3;UBERON:0005290,3.01e-12,3;UBERON:0010096,3.01e-12,3;UBERON:0007023,7.87e-12,114;UBERON:0001301,4.09e-10,1;UBERON:0005418,6.88e-10,1;UBERON:0001389,6.88e-10,1;UBERON:0000026,6.88e-10,1;UBERON:0008784,6.88e-10,1;UBERON:0006058,6.88e-10,1;UBERON:0003663,6.88e-10,1;UBERON:0004256,6.88e-10,1;UBERON:0004708,6.88e-10,1;UBERON:0002101,6.88e-10,1;UBERON:0004709,6.88e-10,1;UBERON:0002529,6.88e-10,1;UBERON:0010538,6.88e-10,1;UBERON:0003661,6.88e-10,1;UBERON:0010890,6.88e-10,1;UBERON:0002471,6.88e-10,1;UBERON:0001383,6.88e-10,1;UBERON:0004357,6.88e-10,1;UBERON:0004347,6.88e-10,1;UBERON:0005420,6.88e-10,1;UBERON:0005732,6.88e-10,1;UBERON:0010758,6.88e-10,1;UBERON:0010707,6.88e-10,1;UBERON:0000978,6.88e-10,1;UBERON:0002103,6.88e-10,1;UBERON:0001665,6.88e-10,1;UBERON:0003823,6.88e-10,1;UBERON:0000154,6.88e-10,1;UBERON:0010709,6.88e-10,1;UBERON:0005733,6.88e-10,1;UBERON:0005730,6.88e-10,1;UBERON:0001000,7.50e-10,1;UBERON:0005352,7.50e-10,1;UBERON:0001764,9.70e-10,1;UBERON:0001825,9.70e-10,1;UBERON:0005904,1.43e-09,4;UBERON:0003133,9.70e-08,48;UBERON:0002553,1.13e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10647 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18396 | |||
|TSSclassifier=S | |||
|UniProt=O95969 | |||
|association_with_transcript=32bp_to_NM_006551,uc001ntb.2_5end | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_1_at_SCGB1D2_5end | |||
|id=chr11:62009756..62009783,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.92e-11;7!CL:0000586;2.92e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.87e-11,7;CL:0000586,2.87e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.12e-13;10!UBERON:0005564;2.12e-13;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.25e-09;1!DOID:1357;1.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.70e-10,1;DOID:1357,9.70e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003135;7.47e-27;11!UBERON:0000473;1.08e-16;8!UBERON:0003101;3.16e-13;22!UBERON:0000079;3.16e-13;22!UBERON:0006947;1.81e-12;3!UBERON:0004054;1.81e-12;3!UBERON:0001896;2.85e-12;3!UBERON:0005290;2.85e-12;3!UBERON:0001301;4.09e-10;1!UBERON:0001000;7.50e-10;1!UBERON:0001389;7.50e-10;1!UBERON:0000026;7.50e-10;1!UBERON:0008784;7.50e-10;1!UBERON:0006058;7.50e-10;1!UBERON:0003663;7.50e-10;1!UBERON:0004256;7.50e-10;1!UBERON:0004708;7.50e-10;1!UBERON:0002101;7.50e-10;1!UBERON:0004709;7.50e-10;1!UBERON:0002529;7.50e-10;1!UBERON:0010538;7.50e-10;1!UBERON:0003661;7.50e-10;1!UBERON:0010890;7.50e-10;1!UBERON:0002471;7.50e-10;1!UBERON:0001383;7.50e-10;1!UBERON:0010758;7.50e-10;1!UBERON:0010707;7.50e-10;1!UBERON:0000978;7.50e-10;1!UBERON:0002103;7.50e-10;1!UBERON:0005352;7.50e-10;1!UBERON:0001665;7.50e-10;1!UBERON:0003823;7.50e-10;1!UBERON:0000154;7.50e-10;1!UBERON:0010709;7.50e-10;1!UBERON:0005795;1.25e-09;1!UBERON:0001764;1.25e-09;1!UBERON:0001825;1.25e-09;1!UBERON:0005904;1.43e-09;4!UBERON:0003133;4.47e-07;44 | |||
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|short_description=p1@SCGB1D2 | |||
}} |
Revision as of 18:29, 10 September 2013
Short description: | p1@SCGB1D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCGB1D2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 32bp_to_NM_006551, uc001ntb.2_5end |
EntrezGene: | SCGB1D2 |
HGNC: | 18396 |
UniProt: | O95969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.87e-11 | 7 |
germ cell | 2.87e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.70e-10 | 1 |
maxillary sinus cancer | 9.70e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.