FFCP PHASE1:Hg19::chr12:120687909..120687930,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5829|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9718|TSSclassifier=S|UniProt=P49023|association_with_transcript=26bp_to_uc001txx.2_5end|coexpression_cluster_id=C1346|description=CAGE_peak_13_at_PXN_5end|id=chr12:120687909..120687930,-|ontology_enrichment_celltype=CL:0002139!2.80e-28!24;CL:0000115!2.15e-24!35;CL:0000071!2.67e-21!18;CL:0002546!2.67e-21!18;CL:0002078!2.38e-18!44;CL:0000213!1.39e-13!57;CL:0000215!1.39e-13!57;CL:1000413!3.71e-11!9;CL:0005020!1.59e-08!6;CL:0002138!1.59e-08!6;CL:0005022!1.59e-08!6;CL:0002543!3.53e-08!6;CL:0002544!5.54e-08!6|ontology_enrichment_celltype_v019=CL:0002139;3.79e-40;24!CL:0000115;2.77e-33;36!CL:0000071;7.91e-31;18!CL:0002078;2.85e-20;45!CL:1000413;1.89e-15;9!CL:0000213;2.46e-13;58!CL:0000215;2.46e-13;58!CL:0002138;8.07e-11;6!CL:0002543;2.01e-10;6!CL:0002544;9.00e-10;6!CL:0002188;8.47e-09;5!CL:0002618;2.01e-08;3!CL:0002144;2.03e-08;3|ontology_enrichment_celltype_v019_2=CL:0002139,1.83e-40,24;CL:0000115,2.16e-40,36;CL:0000071,4.11e-31,18;CL:0002546,4.11e-31,18;CL:0002078,1.13e-30,45;CL:0000213,5.23e-22,58;CL:0000215,5.23e-22,58;CL:1000413,7.07e-16,9;CL:0005020,7.53e-11,6;CL:0002138,7.53e-11,6;CL:0005022,7.53e-11,6;CL:0002543,2.59e-10,6;CL:0002544,4.78e-10,6;CL:0002188,8.29e-09,5;CL:0002618,2.05e-08,3;CL:0002144,2.26e-08,3;CL:0000222,1.51e-07,121|ontology_enrichment_development_v019=CL:0002546;7.91e-31;18!CL:0005022;8.07e-11;6!UBERON:0004872;5.55e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.80e-51!115;UBERON:0001986!2.67e-21!18;UBERON:0004638!2.67e-21!18;UBERON:0004852!2.67e-21!18;UBERON:0004111!1.31e-19!241;UBERON:0000477!9.51e-17!286;UBERON:0000025!1.01e-16!194;UBERON:0000487!3.44e-16!22;UBERON:0001049!8.21e-15!57;UBERON:0005068!8.21e-15!57;UBERON:0006241!8.21e-15!57;UBERON:0007135!8.21e-15!57;UBERON:0006914!1.83e-13!25;UBERON:0003075!9.26e-13!86;UBERON:0007284!9.26e-13!86;UBERON:0002346!1.24e-11!90;UBERON:0002616!3.50e-11!59;UBERON:0003915!3.71e-11!9;UBERON:0004700!3.71e-11!9;UBERON:0001917!3.71e-11!9;UBERON:0000055!6.35e-11!69;UBERON:0000119!7.45e-11!312;UBERON:0003080!8.44e-11!42;UBERON:0000483!9.12e-11!309;UBERON:0002780!5.29e-10!41;UBERON:0001890!5.29e-10!41;UBERON:0006240!5.29e-10!41;UBERON:0001017!1.34e-09!82;UBERON:0005743!2.30e-09!86;UBERON:0000955!2.39e-09!69;UBERON:0006238!2.39e-09!69;UBERON:0002020!4.20e-09!34;UBERON:0003528!4.20e-09!34;UBERON:0000467!4.86e-09!625;UBERON:0000480!5.87e-09!626;UBERON:0001893!9.16e-09!34;UBERON:0002791!2.27e-08!33;UBERON:0002049!2.81e-08!79;UBERON:0007798!2.81e-08!79;UBERON:0002298!2.96e-08!8;UBERON:0004872!3.00e-08!84;UBERON:0000468!3.54e-08!659;UBERON:0000073!3.68e-08!94;UBERON:0001016!3.68e-08!94;UBERON:0001981!7.09e-08!60;UBERON:0007500!7.09e-08!60;UBERON:0004537!7.09e-08!60;UBERON:0006965!7.09e-08!60;UBERON:0001869!1.03e-07!32;UBERON:0002465!1.33e-07!10;UBERON:0000064!5.94e-07!219;UBERON:0001638!7.65e-07!9;UBERON:0003920!7.65e-07!9;UBERON:0004582!7.65e-07!9|ontology_enrichment_uberon_v019=UBERON:0004638;7.91e-31;18!UBERON:0001986;7.91e-31;18!UBERON:0004852;7.91e-31;18!UBERON:0000487;2.23e-24;22!UBERON:0006914;6.66e-21;25!UBERON:0003915;1.89e-15;9!UBERON:0004700;1.89e-15;9!UBERON:0001917;1.89e-15;9!UBERON:0000490;2.93e-13;33!UBERON:0001638;1.52e-09;9!UBERON:0003920;1.52e-09;9!UBERON:0004582;1.52e-09;9!UBERON:0002465;1.64e-08;10!UBERON:0010523;2.03e-08;3!UBERON:0001915;2.03e-08;3!UBERON:0001982;2.03e-08;3!UBERON:0004151;2.29e-08;3!UBERON:0000055;3.02e-08;65!UBERON:0001473;5.65e-08;8!UBERON:0004536;5.65e-08;8!UBERON:0006558;5.65e-08;8!UBERON:0007023;9.73e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.11e-31,18;UBERON:0001986,4.11e-31,18;UBERON:0004852,4.11e-31,18;UBERON:0007023,1.22e-25,114;UBERON:0000487,1.32e-24,22;UBERON:0006914,4.22e-21,25;UBERON:0003915,7.07e-16,9;UBERON:0004700,7.07e-16,9;UBERON:0001917,7.07e-16,9;UBERON:0000055,7.43e-16,68;UBERON:0002049,6.44e-13,78;UBERON:0007798,6.44e-13,78;UBERON:0004111,1.07e-12,240;UBERON:0004872,1.51e-12,83;UBERON:0001009,1.97e-11,112;UBERON:0007500,2.93e-11,59;UBERON:0001981,2.93e-11,59;UBERON:0004537,2.93e-11,59;UBERON:0006965,2.93e-11,59;UBERON:0000025,3.96e-10,192;UBERON:0004535,5.10e-10,109;UBERON:0003914,1.12e-09,117;UBERON:0001638,1.98e-09,9;UBERON:0003920,1.98e-09,9;UBERON:0004582,1.98e-09,9;UBERON:0003887,3.75e-09,12;UBERON:0002465,1.21e-08,10;UBERON:0004151,2.10e-08,3;UBERON:0010523,2.26e-08,3;UBERON:0001915,2.26e-08,3;UBERON:0001982,2.26e-08,3;UBERON:0001473,5.37e-08,8;UBERON:0004536,5.37e-08,8;UBERON:0006558,5.37e-08,8;UBERON:0004876,1.21e-07,11;UBERON:0000080,8.41e-07,9;UBERON:0002120,8.41e-07,9;UBERON:0004875,8.41e-07,9;UBERON:0005721,8.41e-07,9;UBERON:0005754,8.41e-07,9;UBERON:0007297,8.41e-07,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |||
|TSSclassifier=S | |||
|UniProt=P49023 | |||
|association_with_transcript=26bp_to_uc001txx.2_5end | |||
|coexpression_cluster_id=C1346 | |||
|description=CAGE_peak_13_at_PXN_5end | |||
|id=chr12:120687909..120687930,- | |||
|ontology_enrichment_celltype=CL:0002139!2.80e-28!24;CL:0000115!2.15e-24!35;CL:0000071!2.67e-21!18;CL:0002546!2.67e-21!18;CL:0002078!2.38e-18!44;CL:0000213!1.39e-13!57;CL:0000215!1.39e-13!57;CL:1000413!3.71e-11!9;CL:0005020!1.59e-08!6;CL:0002138!1.59e-08!6;CL:0005022!1.59e-08!6;CL:0002543!3.53e-08!6;CL:0002544!5.54e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.79e-40;24!CL:0000115;2.77e-33;36!CL:0000071;7.91e-31;18!CL:0002078;2.85e-20;45!CL:1000413;1.89e-15;9!CL:0000213;2.46e-13;58!CL:0000215;2.46e-13;58!CL:0002138;8.07e-11;6!CL:0002543;2.01e-10;6!CL:0002544;9.00e-10;6!CL:0002188;8.47e-09;5!CL:0002618;2.01e-08;3!CL:0002144;2.03e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.83e-40,24;CL:0000115,2.16e-40,36;CL:0000071,4.11e-31,18;CL:0002546,4.11e-31,18;CL:0002078,1.13e-30,45;CL:0000213,5.23e-22,58;CL:0000215,5.23e-22,58;CL:1000413,7.07e-16,9;CL:0005020,7.53e-11,6;CL:0002138,7.53e-11,6;CL:0005022,7.53e-11,6;CL:0002543,2.59e-10,6;CL:0002544,4.78e-10,6;CL:0002188,8.29e-09,5;CL:0002618,2.05e-08,3;CL:0002144,2.26e-08,3;CL:0000222,1.51e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;7.91e-31;18!CL:0005022;8.07e-11;6!UBERON:0004872;5.55e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-51!115;UBERON:0001986!2.67e-21!18;UBERON:0004638!2.67e-21!18;UBERON:0004852!2.67e-21!18;UBERON:0004111!1.31e-19!241;UBERON:0000477!9.51e-17!286;UBERON:0000025!1.01e-16!194;UBERON:0000487!3.44e-16!22;UBERON:0001049!8.21e-15!57;UBERON:0005068!8.21e-15!57;UBERON:0006241!8.21e-15!57;UBERON:0007135!8.21e-15!57;UBERON:0006914!1.83e-13!25;UBERON:0003075!9.26e-13!86;UBERON:0007284!9.26e-13!86;UBERON:0002346!1.24e-11!90;UBERON:0002616!3.50e-11!59;UBERON:0003915!3.71e-11!9;UBERON:0004700!3.71e-11!9;UBERON:0001917!3.71e-11!9;UBERON:0000055!6.35e-11!69;UBERON:0000119!7.45e-11!312;UBERON:0003080!8.44e-11!42;UBERON:0000483!9.12e-11!309;UBERON:0002780!5.29e-10!41;UBERON:0001890!5.29e-10!41;UBERON:0006240!5.29e-10!41;UBERON:0001017!1.34e-09!82;UBERON:0005743!2.30e-09!86;UBERON:0000955!2.39e-09!69;UBERON:0006238!2.39e-09!69;UBERON:0002020!4.20e-09!34;UBERON:0003528!4.20e-09!34;UBERON:0000467!4.86e-09!625;UBERON:0000480!5.87e-09!626;UBERON:0001893!9.16e-09!34;UBERON:0002791!2.27e-08!33;UBERON:0002049!2.81e-08!79;UBERON:0007798!2.81e-08!79;UBERON:0002298!2.96e-08!8;UBERON:0004872!3.00e-08!84;UBERON:0000468!3.54e-08!659;UBERON:0000073!3.68e-08!94;UBERON:0001016!3.68e-08!94;UBERON:0001981!7.09e-08!60;UBERON:0007500!7.09e-08!60;UBERON:0004537!7.09e-08!60;UBERON:0006965!7.09e-08!60;UBERON:0001869!1.03e-07!32;UBERON:0002465!1.33e-07!10;UBERON:0000064!5.94e-07!219;UBERON:0001638!7.65e-07!9;UBERON:0003920!7.65e-07!9;UBERON:0004582!7.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.91e-31;18!UBERON:0001986;7.91e-31;18!UBERON:0004852;7.91e-31;18!UBERON:0000487;2.23e-24;22!UBERON:0006914;6.66e-21;25!UBERON:0003915;1.89e-15;9!UBERON:0004700;1.89e-15;9!UBERON:0001917;1.89e-15;9!UBERON:0000490;2.93e-13;33!UBERON:0001638;1.52e-09;9!UBERON:0003920;1.52e-09;9!UBERON:0004582;1.52e-09;9!UBERON:0002465;1.64e-08;10!UBERON:0010523;2.03e-08;3!UBERON:0001915;2.03e-08;3!UBERON:0001982;2.03e-08;3!UBERON:0004151;2.29e-08;3!UBERON:0000055;3.02e-08;65!UBERON:0001473;5.65e-08;8!UBERON:0004536;5.65e-08;8!UBERON:0006558;5.65e-08;8!UBERON:0007023;9.73e-07;114 | |||
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|short_description=p13@PXN | |||
}} |
Revision as of 21:15, 10 September 2013
Short description: | p13@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_PXN_5end |
Coexpression cluster: | C1346_Endothelial_Renal_Hepatic_Lymphatic_heart_breast_adipose |
Association with transcript: | 26bp_to_uc001txx.2_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | P49023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.83e-40 | 24 |
endothelial cell | 2.16e-40 | 36 |
blood vessel endothelial cell | 4.11e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.11e-31 | 18 |
meso-epithelial cell | 1.13e-30 | 45 |
lining cell | 5.23e-22 | 58 |
barrier cell | 5.23e-22 | 58 |
endothelial cell of artery | 7.07e-16 | 9 |
lymphangioblast | 7.53e-11 | 6 |
endothelial cell of lymphatic vessel | 7.53e-11 | 6 |
vascular lymphangioblast | 7.53e-11 | 6 |
vein endothelial cell | 2.59e-10 | 6 |
aortic endothelial cell | 4.78e-10 | 6 |
glomerular endothelial cell | 8.29e-09 | 5 |
endothelial cell of umbilical vein | 2.05e-08 | 3 |
capillary endothelial cell | 2.26e-08 | 3 |
mesodermal cell | 1.51e-07 | 121 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.