FFCP PHASE1:Hg19::chr12:124938313..124938360,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr12:124938313..124938360,+|id=chr12:124938313..124938360,+|ontology_enrichment_celltype=CL:0000738!2.87e-65!140;CL:0002057!1.94e-63!42;CL:0000860!2.93e-58!45;CL:0002031!8.46e-55!124;CL:0002087!1.97e-54!119;CL:0000766!8.89e-51!76;CL:0000037!3.60e-50!172;CL:0000566!3.60e-50!172;CL:0000988!1.42e-47!182;CL:0002032!1.35e-46!165;CL:0000837!1.35e-46!165;CL:0000557!4.01e-43!71;CL:0000839!7.88e-42!70;CL:0002009!2.13e-39!65;CL:0002194!6.23e-39!63;CL:0000576!6.23e-39!63;CL:0000040!6.23e-39!63;CL:0000559!6.23e-39!63;CL:0000763!4.81e-32!112;CL:0000049!4.81e-32!112;CL:0002393!2.59e-16!9;CL:0002397!2.59e-16!9;CL:0000134!7.10e-16!358;CL:0002320!3.97e-15!365;CL:0000219!4.63e-13!390;CL:0000838!4.74e-13!52;CL:0000542!1.13e-12!53;CL:0000051!1.13e-12!53;CL:0000034!5.13e-10!444;CL:0000048!5.88e-10!430;CL:0000723!1.61e-09!436;CL:0000094!2.33e-08!8;CL:0000081!1.20e-07!11;CL:0000767!5.16e-07!3;CL:0000623!9.07e-07!3;CL:0000825!9.07e-07!3|ontology_enrichment_celltype_v019=CL:0000860;7.43e-68;33!CL:0002057;7.43e-68;33!CL:0000576;1.50e-52;48!CL:0000473;4.05e-47;39!CL:0000234;4.05e-47;39!CL:0000766;2.67e-39;69!CL:0002393;3.16e-22;6!CL:0002397;3.16e-22;6!CL:0002087;2.51e-21;104!CL:0000763;5.20e-17;100!CL:0000738;4.53e-14;136!CL:0000767;1.98e-12;3!CL:0000623;5.61e-12;3!CL:0000226;1.32e-11;3!CL:0000842;1.32e-11;3!CL:0000094;1.38e-11;8!CL:0000988;5.04e-09;177!CL:0000081;2.52e-08;11!CL:0000771;4.89e-08;2!CL:0000219;2.95e-07;193!CL:0000097;6.05e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-97,42;CL:0002057,1.82e-97,42;CL:0000473,3.55e-84,48;CL:0000234,3.55e-84,48;CL:0000766,1.51e-82,72;CL:0000738,4.30e-69,136;CL:0000839,4.69e-69,66;CL:0000557,6.68e-68,67;CL:0002194,1.43e-65,59;CL:0000576,1.43e-65,59;CL:0000040,1.43e-65,59;CL:0000559,1.43e-65,59;CL:0002009,3.61e-63,61;CL:0002087,2.99e-58,115;CL:0002031,2.66e-55,120;CL:0000037,6.55e-54,168;CL:0000763,6.20e-52,108;CL:0000049,6.20e-52,108;CL:0000988,1.27e-50,177;CL:0002032,1.35e-49,161;CL:0000837,1.35e-49,161;CL:0002393,7.28e-25,9;CL:0002397,7.28e-25,9;CL:0000134,9.41e-20,354;CL:0002320,3.77e-19,361;CL:0000219,5.03e-17,386;CL:0000034,2.29e-15,441;CL:0000048,2.01e-14,427;CL:0000723,4.59e-14,433;CL:0000767,2.10e-12,3;CL:0000623,6.39e-12,3;CL:0000825,6.39e-12,3;CL:0000094,1.24e-11,8;CL:0000226,1.42e-11,3;CL:0000842,1.42e-11,3;CL:0000081,2.33e-08,11;CL:0000771,3.87e-08,2;CL:0000097,5.99e-07,5;CL:0002028,5.99e-07,5|ontology_enrichment_development_v019=CL:0002057;1.19e-68;42!CL:0000049;7.39e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.94e-39!102;UBERON:0003061!1.94e-39!102;UBERON:0002371!2.15e-38!80;UBERON:0001474!3.19e-36!86;UBERON:0002193!2.20e-34!112;UBERON:0004765!5.48e-30!101;UBERON:0001434!5.48e-30!101;UBERON:0002405!2.69e-23!115;UBERON:0002204!1.17e-14!167;UBERON:0002384!4.11e-14!375;UBERON:0003081!5.54e-14!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.21e-59,76;UBERON:0001474,6.19e-54,82;UBERON:0002390,5.58e-52,98;UBERON:0003061,5.58e-52,98;UBERON:0004765,2.28e-48,90;UBERON:0002405,1.59e-46,93;UBERON:0002193,2.63e-46,108;UBERON:0001434,1.19e-42,100;UBERON:0002204,6.20e-22,167;UBERON:0003081,3.56e-20,203;UBERON:0002384,2.51e-18,371;UBERON:0000926,1.22e-09,315;UBERON:0004120,1.22e-09,315;UBERON:0006603,1.22e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,11.0141997517693,5.37361157336098,16.7201413181362,0,0,0,0,0,0,31.577738286317,32.6887449376331,37.1088588924107,0,0,0,0.436194716338694,0,1.94067248950253,1.85943229524548,3.28934310417461,6.81354015969228,5.75384784644301,5.12321413058201,5.91205574721463,11.0318617835718,9.03678557017357,5.41705946377367,1.50593871634084,2.45615535052061,2.47195832889593,5.20342617030534,2.88836124368484,5.75403413219137,0.989553900560148,0.797854630486527,2.13112375266347,3.48251086354301,4.53908179752912,3.11411124497787,5.7787193009051,4.69334626578181,6.5156653411535,1.81619850790011,3.68277635987565,3.79754864929061,2.32380814943136,4.889898899196,2.09658645508376,1.79725809834392,0.750884464207532,0,2.56511469367124,1.59133341759272,0.91332076882317,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,1.70763890732835,1.17447437874188,2.29363936875137,1.32171328579026,2.80254281490768,0,0.393419540227666,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0,0.768547918354051,0.130059347559878,0.328875809207352,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,1.00803371612366,2.13952156626806,1.88271725047639,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr12:124938313..124938360,+ | |||
|id=chr12:124938313..124938360,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.87e-65!140;CL:0002057!1.94e-63!42;CL:0000860!2.93e-58!45;CL:0002031!8.46e-55!124;CL:0002087!1.97e-54!119;CL:0000766!8.89e-51!76;CL:0000037!3.60e-50!172;CL:0000566!3.60e-50!172;CL:0000988!1.42e-47!182;CL:0002032!1.35e-46!165;CL:0000837!1.35e-46!165;CL:0000557!4.01e-43!71;CL:0000839!7.88e-42!70;CL:0002009!2.13e-39!65;CL:0002194!6.23e-39!63;CL:0000576!6.23e-39!63;CL:0000040!6.23e-39!63;CL:0000559!6.23e-39!63;CL:0000763!4.81e-32!112;CL:0000049!4.81e-32!112;CL:0002393!2.59e-16!9;CL:0002397!2.59e-16!9;CL:0000134!7.10e-16!358;CL:0002320!3.97e-15!365;CL:0000219!4.63e-13!390;CL:0000838!4.74e-13!52;CL:0000542!1.13e-12!53;CL:0000051!1.13e-12!53;CL:0000034!5.13e-10!444;CL:0000048!5.88e-10!430;CL:0000723!1.61e-09!436;CL:0000094!2.33e-08!8;CL:0000081!1.20e-07!11;CL:0000767!5.16e-07!3;CL:0000623!9.07e-07!3;CL:0000825!9.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.43e-68;33!CL:0002057;7.43e-68;33!CL:0000576;1.50e-52;48!CL:0000473;4.05e-47;39!CL:0000234;4.05e-47;39!CL:0000766;2.67e-39;69!CL:0002393;3.16e-22;6!CL:0002397;3.16e-22;6!CL:0002087;2.51e-21;104!CL:0000763;5.20e-17;100!CL:0000738;4.53e-14;136!CL:0000767;1.98e-12;3!CL:0000623;5.61e-12;3!CL:0000226;1.32e-11;3!CL:0000842;1.32e-11;3!CL:0000094;1.38e-11;8!CL:0000988;5.04e-09;177!CL:0000081;2.52e-08;11!CL:0000771;4.89e-08;2!CL:0000219;2.95e-07;193!CL:0000097;6.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-97,42;CL:0002057,1.82e-97,42;CL:0000473,3.55e-84,48;CL:0000234,3.55e-84,48;CL:0000766,1.51e-82,72;CL:0000738,4.30e-69,136;CL:0000839,4.69e-69,66;CL:0000557,6.68e-68,67;CL:0002194,1.43e-65,59;CL:0000576,1.43e-65,59;CL:0000040,1.43e-65,59;CL:0000559,1.43e-65,59;CL:0002009,3.61e-63,61;CL:0002087,2.99e-58,115;CL:0002031,2.66e-55,120;CL:0000037,6.55e-54,168;CL:0000763,6.20e-52,108;CL:0000049,6.20e-52,108;CL:0000988,1.27e-50,177;CL:0002032,1.35e-49,161;CL:0000837,1.35e-49,161;CL:0002393,7.28e-25,9;CL:0002397,7.28e-25,9;CL:0000134,9.41e-20,354;CL:0002320,3.77e-19,361;CL:0000219,5.03e-17,386;CL:0000034,2.29e-15,441;CL:0000048,2.01e-14,427;CL:0000723,4.59e-14,433;CL:0000767,2.10e-12,3;CL:0000623,6.39e-12,3;CL:0000825,6.39e-12,3;CL:0000094,1.24e-11,8;CL:0000226,1.42e-11,3;CL:0000842,1.42e-11,3;CL:0000081,2.33e-08,11;CL:0000771,3.87e-08,2;CL:0000097,5.99e-07,5;CL:0002028,5.99e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-68;42!CL:0000049;7.39e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-39!102;UBERON:0003061!1.94e-39!102;UBERON:0002371!2.15e-38!80;UBERON:0001474!3.19e-36!86;UBERON:0002193!2.20e-34!112;UBERON:0004765!5.48e-30!101;UBERON:0001434!5.48e-30!101;UBERON:0002405!2.69e-23!115;UBERON:0002204!1.17e-14!167;UBERON:0002384!4.11e-14!375;UBERON:0003081!5.54e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.21e-59,76;UBERON:0001474,6.19e-54,82;UBERON:0002390,5.58e-52,98;UBERON:0003061,5.58e-52,98;UBERON:0004765,2.28e-48,90;UBERON:0002405,1.59e-46,93;UBERON:0002193,2.63e-46,108;UBERON:0001434,1.19e-42,100;UBERON:0002204,6.20e-22,167;UBERON:0003081,3.56e-20,203;UBERON:0002384,2.51e-18,371;UBERON:0000926,1.22e-09,315;UBERON:0004120,1.22e-09,315;UBERON:0006603,1.22e-09,315 | |||
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|short_description=p@chr12:124938313..124938360,+ | |||
}} |
Revision as of 21:34, 10 September 2013
Short description: | p@chr12:124938313..124938360, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:124938313..124938360, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.21e-59 | 76 |
bone element | 6.19e-54 | 82 |
hematopoietic system | 5.58e-52 | 98 |
blood island | 5.58e-52 | 98 |
skeletal element | 2.28e-48 | 90 |
immune system | 1.59e-46 | 93 |
hemolymphoid system | 2.63e-46 | 108 |
skeletal system | 1.19e-42 | 100 |
musculoskeletal system | 6.20e-22 | 167 |
lateral plate mesoderm | 3.56e-20 | 203 |
connective tissue | 2.51e-18 | 371 |
mesoderm | 1.22e-09 | 315 |
mesoderm-derived structure | 1.22e-09 | 315 |
presumptive mesoderm | 1.22e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.