FFCP PHASE1:Hg19::chr12:52674989..52675002,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:52674989..52675002,+|id=chr12:52674989..52675002,+|ontology_enrichment_celltype=CL:0000066!3.25e-11!254;CL:0002076!1.54e-09!43;CL:0000548!1.93e-07!679;CL:0000004!1.93e-07!679;CL:0000255!1.93e-07!679;CL:0000012!2.93e-07!682|ontology_enrichment_celltype_v019=CL:0002581;5.58e-09;1!CL:0002327;5.04e-08;4!CL:0000569;5.04e-08;4|ontology_enrichment_celltype_v019_2=CL:0002581,5.59e-09,1;CL:0000569,4.38e-08,4;CL:0000011,4.38e-08,4;CL:0002327,6.95e-08,4|ontology_enrichment_development_v019=UBERON:0003099;1.97e-08;1!UBERON:0003852;1.97e-08;1!CL:0000011;5.04e-08;4|ontology_enrichment_disease=DOID:305!1.73e-12!106;DOID:1749!1.62e-10!14;DOID:0050687!1.57e-07!143|ontology_enrichment_disease_v019=DOID:1749;1.61e-08;14!DOID:4362;9.97e-07;5|ontology_enrichment_disease_v019_2=DOID:1749,1.85e-08,14;DOID:4362,9.43e-07,5|ontology_enrichment_uberon=UBERON:0001737!1.29e-07!9;UBERON:0000065!2.08e-07!53;UBERON:0001004!2.69e-07!72|ontology_enrichment_uberon_v019=UBERON:0007195;1.97e-08;1!UBERON:0005705;1.97e-08;1!UBERON:0008193;1.97e-08;1!UBERON:0010912;1.97e-08;1!UBERON:0002514;1.97e-08;1!UBERON:0003457;1.97e-08;1!UBERON:0008907;1.97e-08;1!UBERON:0008001;1.97e-08;1!UBERON:0007213;1.97e-08;1!UBERON:0009891;1.97e-08;1!UBERON:0007914;1.97e-08;1!UBERON:0007375;1.97e-08;1!UBERON:0003323;1.97e-08;1!UBERON:0010258;1.97e-08;1!UBERON:0005253;1.97e-08;1!UBERON:0007842;1.97e-08;1!UBERON:0002397;1.97e-08;1!UBERON:0003113;1.97e-08;1!UBERON:0003277;1.97e-08;1!UBERON:0001709;1.97e-08;1!UBERON:0002244;1.97e-08;1!UBERON:0005620;1.97e-08;1!UBERON:0010364;1.97e-08;1!UBERON:0004288;1.97e-08;1!UBERON:0001911;5.04e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.10e-08,1;UBERON:0008193,1.10e-08,1;UBERON:0010912,1.10e-08,1;UBERON:0002514,1.10e-08,1;UBERON:0003457,1.10e-08,1;UBERON:0008907,1.10e-08,1;UBERON:0008001,1.10e-08,1;UBERON:0007213,1.10e-08,1;UBERON:0009891,1.10e-08,1;UBERON:0007914,1.10e-08,1;UBERON:0009292,1.10e-08,1;UBERON:0003099,1.10e-08,1;UBERON:0007375,1.10e-08,1;UBERON:0003323,1.10e-08,1;UBERON:0010258,1.10e-08,1;UBERON:0007842,1.10e-08,1;UBERON:0009494,1.10e-08,1;UBERON:0010042,1.10e-08,1;UBERON:0010045,1.10e-08,1;UBERON:0010259,1.10e-08,1;UBERON:0010359,1.10e-08,1;UBERON:0009526,1.10e-08,1;UBERON:0002397,1.10e-08,1;UBERON:0003113,1.10e-08,1;UBERON:0003277,1.10e-08,1;UBERON:0001709,1.10e-08,1;UBERON:0004066,1.10e-08,1;UBERON:0002244,1.10e-08,1;UBERON:0005620,1.10e-08,1;UBERON:0004362,1.10e-08,1;UBERON:0010364,1.10e-08,1;UBERON:0010046,1.10e-08,1;UBERON:0005868,1.10e-08,1;UBERON:0007238,1.10e-08,1;UBERON:0004288,1.10e-08,1;UBERON:0004068,1.10e-08,1;UBERON:0010334,1.10e-08,1;UBERON:0003852,1.10e-08,1;UBERON:0010253,1.10e-08,1;UBERON:0007195,3.28e-08,1;UBERON:0001911,6.95e-08,4;UBERON:0005333,6.95e-08,4;UBERON:0008425,6.95e-08,4;UBERON:0005311,6.95e-08,4|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0.872338524100369,0,0,0,0.982935746006035,2.09340350391728,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,1.72101972449288,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0,0.723033089650446,0.992645754591546,1.08939722046203,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,1.25381931783988,1.16253575405585,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,1.30303176000821,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,5.52463103837025,0,0.128139149255701,0.511707249066704,0.64341568457443,10.3892646511494,0,0,0.0821271560138091,0,0,0,0.200506470303285,1.65745780084613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.2023155617111,0,2.51849877464512,0,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0.572499546967965,0.372158369359667,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,1.31535265576129,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.288666338176536,1.34060455107157,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.1137934482855,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0.435753854075961,1.39423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.293977192243133,2.00236175134926,0,0,0.580537987734511,0.584714536689484,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0.233713309847224,0,1.51522404220071,0,0,1.83072054717539,1.20984739010591,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.196295437002051,0.471878893390961,0,4.85207797831421,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.62164849248911,0.3414369541879,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.435433495793923,0,0.134704106029175,0,0,0.162806537221949,1.28072815053259,0,0,0,0,0,0,0,0|short_description=p@chr12:52674989..52675002,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:52674989..52675002,+ | |||
|id=chr12:52674989..52675002,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.25e-11!254;CL:0002076!1.54e-09!43;CL:0000548!1.93e-07!679;CL:0000004!1.93e-07!679;CL:0000255!1.93e-07!679;CL:0000012!2.93e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.58e-09;1!CL:0002327;5.04e-08;4!CL:0000569;5.04e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.59e-09,1;CL:0000569,4.38e-08,4;CL:0000011,4.38e-08,4;CL:0002327,6.95e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.97e-08;1!UBERON:0003852;1.97e-08;1!CL:0000011;5.04e-08;4 | |||
|ontology_enrichment_disease=DOID:305!1.73e-12!106;DOID:1749!1.62e-10!14;DOID:0050687!1.57e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.61e-08;14!DOID:4362;9.97e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.85e-08,14;DOID:4362,9.43e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.29e-07!9;UBERON:0000065!2.08e-07!53;UBERON:0001004!2.69e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.97e-08;1!UBERON:0005705;1.97e-08;1!UBERON:0008193;1.97e-08;1!UBERON:0010912;1.97e-08;1!UBERON:0002514;1.97e-08;1!UBERON:0003457;1.97e-08;1!UBERON:0008907;1.97e-08;1!UBERON:0008001;1.97e-08;1!UBERON:0007213;1.97e-08;1!UBERON:0009891;1.97e-08;1!UBERON:0007914;1.97e-08;1!UBERON:0007375;1.97e-08;1!UBERON:0003323;1.97e-08;1!UBERON:0010258;1.97e-08;1!UBERON:0005253;1.97e-08;1!UBERON:0007842;1.97e-08;1!UBERON:0002397;1.97e-08;1!UBERON:0003113;1.97e-08;1!UBERON:0003277;1.97e-08;1!UBERON:0001709;1.97e-08;1!UBERON:0002244;1.97e-08;1!UBERON:0005620;1.97e-08;1!UBERON:0010364;1.97e-08;1!UBERON:0004288;1.97e-08;1!UBERON:0001911;5.04e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.10e-08,1;UBERON:0008193,1.10e-08,1;UBERON:0010912,1.10e-08,1;UBERON:0002514,1.10e-08,1;UBERON:0003457,1.10e-08,1;UBERON:0008907,1.10e-08,1;UBERON:0008001,1.10e-08,1;UBERON:0007213,1.10e-08,1;UBERON:0009891,1.10e-08,1;UBERON:0007914,1.10e-08,1;UBERON:0009292,1.10e-08,1;UBERON:0003099,1.10e-08,1;UBERON:0007375,1.10e-08,1;UBERON:0003323,1.10e-08,1;UBERON:0010258,1.10e-08,1;UBERON:0007842,1.10e-08,1;UBERON:0009494,1.10e-08,1;UBERON:0010042,1.10e-08,1;UBERON:0010045,1.10e-08,1;UBERON:0010259,1.10e-08,1;UBERON:0010359,1.10e-08,1;UBERON:0009526,1.10e-08,1;UBERON:0002397,1.10e-08,1;UBERON:0003113,1.10e-08,1;UBERON:0003277,1.10e-08,1;UBERON:0001709,1.10e-08,1;UBERON:0004066,1.10e-08,1;UBERON:0002244,1.10e-08,1;UBERON:0005620,1.10e-08,1;UBERON:0004362,1.10e-08,1;UBERON:0010364,1.10e-08,1;UBERON:0010046,1.10e-08,1;UBERON:0005868,1.10e-08,1;UBERON:0007238,1.10e-08,1;UBERON:0004288,1.10e-08,1;UBERON:0004068,1.10e-08,1;UBERON:0010334,1.10e-08,1;UBERON:0003852,1.10e-08,1;UBERON:0010253,1.10e-08,1;UBERON:0007195,3.28e-08,1;UBERON:0001911,6.95e-08,4;UBERON:0005333,6.95e-08,4;UBERON:0008425,6.95e-08,4;UBERON:0005311,6.95e-08,4 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0.872338524100369,0,0,0,0.982935746006035,2.09340350391728,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,1.72101972449288,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0,0.723033089650446,0.992645754591546,1.08939722046203,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,1.25381931783988,1.16253575405585,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,1.30303176000821,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,5.52463103837025,0,0.128139149255701,0.511707249066704,0.64341568457443,10.3892646511494,0,0,0.0821271560138091,0,0,0,0.200506470303285,1.65745780084613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.2023155617111,0,2.51849877464512,0,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0.572499546967965,0.372158369359667,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,1.31535265576129,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.288666338176536,1.34060455107157,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.1137934482855,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0.435753854075961,1.39423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.293977192243133,2.00236175134926,0,0,0.580537987734511,0.584714536689484,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0.233713309847224,0,1.51522404220071,0,0,1.83072054717539,1.20984739010591,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.196295437002051,0.471878893390961,0,4.85207797831421,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.62164849248911,0.3414369541879,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.435433495793923,0,0.134704106029175,0,0,0.162806537221949,1.28072815053259,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:52674989..52675002,+ | |||
}} |
Revision as of 23:08, 10 September 2013
Short description: | p@chr12:52674989..52675002, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52674989..52675002, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.59e-09 | 1 |
cardiac mesenchymal cell | 4.38e-08 | 4 |
migratory trunk neural crest cell | 4.38e-08 | 4 |
mammary gland epithelial cell | 6.95e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.85e-08 | 14 |
cervical cancer | 9.43e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.