FFCP PHASE1:Hg19::chr12:69747041..69747093,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4069|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6740|TSSclassifier=N|UniProt=|association_with_transcript=-50bp_to_AK130127_5end|coexpression_cluster_id=C501|description=CAGE_peak_5_at_LYZ_5end|id=chr12:69747041..69747093,+|ontology_enrichment_celltype=CL:0002194!2.39e-58!63;CL:0000576!2.39e-58!63;CL:0000040!2.39e-58!63;CL:0000559!2.39e-58!63;CL:0000766!1.49e-56!76;CL:0002009!6.87e-56!65;CL:0000763!8.52e-54!112;CL:0000049!8.52e-54!112;CL:0002057!3.91e-52!42;CL:0000557!3.05e-51!71;CL:0000839!2.32e-50!70;CL:0000860!1.71e-47!45;CL:0000037!3.15e-42!172;CL:0000566!3.15e-42!172;CL:0002032!3.95e-40!165;CL:0000837!3.95e-40!165;CL:0000988!3.51e-38!182;CL:0002087!5.98e-38!119;CL:0000738!6.98e-38!140;CL:0002031!1.93e-31!124;CL:0002393!1.65e-10!9;CL:0002397!1.65e-10!9;CL:0000134!8.62e-09!358;CL:0002320!3.72e-08!365|ontology_enrichment_celltype_v019=CL:0000860;4.82e-57;33!CL:0002057;4.82e-57;33!CL:0000473;2.30e-56;39!CL:0000234;2.30e-56;39!CL:0000576;7.71e-48;48!CL:0000766;2.29e-34;69!CL:0000763;4.40e-19;100!CL:0000235;9.13e-12;6!CL:0002087;9.82e-12;104!CL:0002393;3.28e-11;6!CL:0002397;3.28e-11;6!CL:0000738;6.95e-11;136!CL:0000988;3.12e-07;177!CL:0000767;9.06e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,6.86e-89,59;CL:0000576,6.86e-89,59;CL:0000040,6.86e-89,59;CL:0000559,6.86e-89,59;CL:0002009,1.92e-85,61;CL:0000766,1.53e-84,72;CL:0000473,2.34e-84,48;CL:0000234,2.34e-84,48;CL:0000557,4.82e-79,67;CL:0000839,1.00e-77,66;CL:0000860,1.63e-73,42;CL:0002057,1.63e-73,42;CL:0000763,2.63e-62,108;CL:0000049,2.63e-62,108;CL:0002087,8.83e-46,115;CL:0000738,6.84e-44,136;CL:0000037,4.06e-41,168;CL:0002031,4.35e-38,120;CL:0000988,5.50e-38,177;CL:0002032,5.68e-38,161;CL:0000837,5.68e-38,161;CL:0002393,4.07e-12,9;CL:0002397,4.07e-12,9;CL:0000235,8.96e-12,6;CL:0000134,5.28e-11,354;CL:0002320,1.97e-10,361;CL:0000219,1.87e-08,386;CL:0000767,8.72e-07,3|ontology_enrichment_development_v019=CL:0002057;3.92e-53;42!CL:0000049;9.74e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.17e-55!102;UBERON:0003061!9.17e-55!102;UBERON:0002193!1.45e-50!112;UBERON:0002371!1.06e-44!80;UBERON:0001474!4.62e-40!86;UBERON:0002405!2.58e-37!115;UBERON:0004765!6.11e-31!101;UBERON:0001434!6.11e-31!101;UBERON:0003081!3.25e-17!216;UBERON:0002204!7.56e-13!167;UBERON:0000178!1.05e-09!15;UBERON:0000179!1.05e-09!15;UBERON:0000463!1.05e-09!15;UBERON:0007023!5.29e-08!115;UBERON:0002384!1.27e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.88e-14;15!UBERON:0000179;2.88e-14;15!UBERON:0000463;2.88e-14;15!UBERON:0002390;5.39e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-79,98;UBERON:0003061,1.34e-79,98;UBERON:0002193,1.09e-74,108;UBERON:0002371,4.30e-70,76;UBERON:0001474,1.04e-63,82;UBERON:0002405,3.41e-60,93;UBERON:0004765,1.62e-56,90;UBERON:0001434,3.86e-49,100;UBERON:0003081,1.90e-30,203;UBERON:0002204,1.15e-23,167;UBERON:0000178,3.27e-14,15;UBERON:0000179,3.27e-14,15;UBERON:0000463,3.27e-14,15;UBERON:0000926,2.40e-13,315;UBERON:0004120,2.40e-13,315;UBERON:0006603,2.40e-13,315;UBERON:0002384,1.16e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.781949441481,12.666370137208,23.6868668673596,0,0,0,0,0,1.17440175733939,18.8358438900838,15.4419224552009,18.8799457522791,7.83704159839735,12.9557466407592,6.69696475848885,23.4091164435099,19.6495490718181,16.9808842831471,19.9888971738889,24.2589053932877,20.7503268499719,32.509240332403,27.4091955986138,21.0469184600841,75.8440497620561,40.0200503821972,21.6682378550947,25.7892005173368,23.4699289049747,23.1465188978437,60.9106945818096,37.869625194979,32.6061934157511,39.5821560224059,33.5098944804342,32.8193057910174,26.4090407152011,26.0997203357924,15.5705562248894,40.4510351063357,45.8904968209777,26.9314167434345,22.3997815974346,31.303599058943,19.304205633894,19.0129757680748,4.889898899196,11.9505427939774,57.2876018847125,27.7827251756787,27.3233497385036,3.70516566863623,0.59675003159727,2.55729815270488,0,0,0,1.28019066769952,0,1.14950487990897,0.661044872784862,0,0,0,0,0,1.68152568894461,4.47752944117631,0,0,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.637130828648193,0,0,0.903450714466637,0.895906278080929,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,4.21911611751088,6.61693001737215,3.98873881556595,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5419353348069,16.6143028248859,15.9035343648939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3247561282381,9.5428847372104,73.7918788190611,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6740 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-50bp_to_AK130127_5end | |||
|coexpression_cluster_id=C501 | |||
|description=CAGE_peak_5_at_LYZ_5end | |||
|id=chr12:69747041..69747093,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.39e-58!63;CL:0000576!2.39e-58!63;CL:0000040!2.39e-58!63;CL:0000559!2.39e-58!63;CL:0000766!1.49e-56!76;CL:0002009!6.87e-56!65;CL:0000763!8.52e-54!112;CL:0000049!8.52e-54!112;CL:0002057!3.91e-52!42;CL:0000557!3.05e-51!71;CL:0000839!2.32e-50!70;CL:0000860!1.71e-47!45;CL:0000037!3.15e-42!172;CL:0000566!3.15e-42!172;CL:0002032!3.95e-40!165;CL:0000837!3.95e-40!165;CL:0000988!3.51e-38!182;CL:0002087!5.98e-38!119;CL:0000738!6.98e-38!140;CL:0002031!1.93e-31!124;CL:0002393!1.65e-10!9;CL:0002397!1.65e-10!9;CL:0000134!8.62e-09!358;CL:0002320!3.72e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.82e-57;33!CL:0002057;4.82e-57;33!CL:0000473;2.30e-56;39!CL:0000234;2.30e-56;39!CL:0000576;7.71e-48;48!CL:0000766;2.29e-34;69!CL:0000763;4.40e-19;100!CL:0000235;9.13e-12;6!CL:0002087;9.82e-12;104!CL:0002393;3.28e-11;6!CL:0002397;3.28e-11;6!CL:0000738;6.95e-11;136!CL:0000988;3.12e-07;177!CL:0000767;9.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.86e-89,59;CL:0000576,6.86e-89,59;CL:0000040,6.86e-89,59;CL:0000559,6.86e-89,59;CL:0002009,1.92e-85,61;CL:0000766,1.53e-84,72;CL:0000473,2.34e-84,48;CL:0000234,2.34e-84,48;CL:0000557,4.82e-79,67;CL:0000839,1.00e-77,66;CL:0000860,1.63e-73,42;CL:0002057,1.63e-73,42;CL:0000763,2.63e-62,108;CL:0000049,2.63e-62,108;CL:0002087,8.83e-46,115;CL:0000738,6.84e-44,136;CL:0000037,4.06e-41,168;CL:0002031,4.35e-38,120;CL:0000988,5.50e-38,177;CL:0002032,5.68e-38,161;CL:0000837,5.68e-38,161;CL:0002393,4.07e-12,9;CL:0002397,4.07e-12,9;CL:0000235,8.96e-12,6;CL:0000134,5.28e-11,354;CL:0002320,1.97e-10,361;CL:0000219,1.87e-08,386;CL:0000767,8.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-53;42!CL:0000049;9.74e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.17e-55!102;UBERON:0003061!9.17e-55!102;UBERON:0002193!1.45e-50!112;UBERON:0002371!1.06e-44!80;UBERON:0001474!4.62e-40!86;UBERON:0002405!2.58e-37!115;UBERON:0004765!6.11e-31!101;UBERON:0001434!6.11e-31!101;UBERON:0003081!3.25e-17!216;UBERON:0002204!7.56e-13!167;UBERON:0000178!1.05e-09!15;UBERON:0000179!1.05e-09!15;UBERON:0000463!1.05e-09!15;UBERON:0007023!5.29e-08!115;UBERON:0002384!1.27e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.88e-14;15!UBERON:0000179;2.88e-14;15!UBERON:0000463;2.88e-14;15!UBERON:0002390;5.39e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-79,98;UBERON:0003061,1.34e-79,98;UBERON:0002193,1.09e-74,108;UBERON:0002371,4.30e-70,76;UBERON:0001474,1.04e-63,82;UBERON:0002405,3.41e-60,93;UBERON:0004765,1.62e-56,90;UBERON:0001434,3.86e-49,100;UBERON:0003081,1.90e-30,203;UBERON:0002204,1.15e-23,167;UBERON:0000178,3.27e-14,15;UBERON:0000179,3.27e-14,15;UBERON:0000463,3.27e-14,15;UBERON:0000926,2.40e-13,315;UBERON:0004120,2.40e-13,315;UBERON:0006603,2.40e-13,315;UBERON:0002384,1.16e-09,371 | |||
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|short_description=p5@LYZ | |||
}} |
Revision as of 00:11, 11 September 2013
Short description: | p5@LYZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LYZ_5end |
Coexpression cluster: | C501_CD14_trachea_throat_Basophils_acute_Peripheral_Macrophage |
Association with transcript: | -50bp_to_AK130127_5end |
EntrezGene: | LYZ |
HGNC: | 6740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.86e-89 | 59 |
monocyte | 6.86e-89 | 59 |
monoblast | 6.86e-89 | 59 |
promonocyte | 6.86e-89 | 59 |
macrophage dendritic cell progenitor | 1.92e-85 | 61 |
myeloid leukocyte | 1.53e-84 | 72 |
defensive cell | 2.34e-84 | 48 |
phagocyte | 2.34e-84 | 48 |
granulocyte monocyte progenitor cell | 4.82e-79 | 67 |
myeloid lineage restricted progenitor cell | 1.00e-77 | 66 |
classical monocyte | 1.63e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-73 | 42 |
myeloid cell | 2.63e-62 | 108 |
common myeloid progenitor | 2.63e-62 | 108 |
nongranular leukocyte | 8.83e-46 | 115 |
leukocyte | 6.84e-44 | 136 |
hematopoietic stem cell | 4.06e-41 | 168 |
hematopoietic lineage restricted progenitor cell | 4.35e-38 | 120 |
hematopoietic cell | 5.50e-38 | 177 |
hematopoietic oligopotent progenitor cell | 5.68e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.68e-38 | 161 |
intermediate monocyte | 4.07e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.07e-12 | 9 |
macrophage | 8.96e-12 | 6 |
mesenchymal cell | 5.28e-11 | 354 |
connective tissue cell | 1.97e-10 | 361 |
motile cell | 1.87e-08 | 386 |
basophil | 8.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-79 | 98 |
blood island | 1.34e-79 | 98 |
hemolymphoid system | 1.09e-74 | 108 |
bone marrow | 4.30e-70 | 76 |
bone element | 1.04e-63 | 82 |
immune system | 3.41e-60 | 93 |
skeletal element | 1.62e-56 | 90 |
skeletal system | 3.86e-49 | 100 |
lateral plate mesoderm | 1.90e-30 | 203 |
musculoskeletal system | 1.15e-23 | 167 |
blood | 3.27e-14 | 15 |
haemolymphatic fluid | 3.27e-14 | 15 |
organism substance | 3.27e-14 | 15 |
mesoderm | 2.40e-13 | 315 |
mesoderm-derived structure | 2.40e-13 | 315 |
presumptive mesoderm | 2.40e-13 | 315 |
connective tissue | 1.16e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.