FFCP PHASE1:Hg19::chr13:49550152..49550167,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20296|TSSclassifier=S|UniProt=|association_with_transcript=-37bp_to_ENST00000378383_5end|coexpression_cluster_id=C7|description=CAGE_peak_15_at_FNDC3A_5end|id=chr13:49550152..49550167,+|ontology_enrichment_celltype=CL:0000738!3.24e-35!140;CL:0002057!2.61e-30!42;CL:0002031!6.94e-29!124;CL:0002087!1.06e-28!119;CL:0000037!4.14e-28!172;CL:0000566!4.14e-28!172;CL:0000860!8.66e-28!45;CL:0000766!6.14e-27!76;CL:0000988!2.17e-26!182;CL:0002032!3.62e-25!165;CL:0000837!3.62e-25!165;CL:0000557!1.12e-23!71;CL:0000839!7.94e-23!70;CL:0002194!9.10e-22!63;CL:0000576!9.10e-22!63;CL:0000040!9.10e-22!63;CL:0000559!9.10e-22!63;CL:0002009!1.52e-21!65;CL:0000763!5.67e-18!112;CL:0000049!5.67e-18!112;CL:0000134!1.07e-08!358;CL:0002320!5.23e-08!365;CL:0000838!2.12e-07!52;CL:0000542!4.65e-07!53;CL:0000051!4.65e-07!53|ontology_enrichment_celltype_v019=CL:0000860;2.15e-76;33!CL:0002057;2.15e-76;33!CL:0000473;1.90e-56;39!CL:0000234;1.90e-56;39!CL:0000576;2.14e-47;48!CL:0000766;1.25e-32;69!CL:0002087;6.40e-17;104!CL:0000763;2.88e-14;100!CL:0000738;7.69e-13;136!CL:0000784;2.24e-10;3!CL:0000775;1.32e-09;3!CL:0000988;7.45e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,1.81e-87,42;CL:0002057,1.81e-87,42;CL:0000473,1.65e-79,48;CL:0000234,1.65e-79,48;CL:0002194,2.96e-65,59;CL:0000576,2.96e-65,59;CL:0000040,2.96e-65,59;CL:0000559,2.96e-65,59;CL:0000766,9.77e-65,72;CL:0002009,8.24e-63,61;CL:0000557,1.77e-59,67;CL:0000839,2.44e-57,66;CL:0000738,1.24e-50,136;CL:0002087,1.00e-46,115;CL:0002031,3.26e-42,120;CL:0000763,9.54e-42,108;CL:0000049,9.54e-42,108;CL:0000037,2.58e-40,168;CL:0000988,1.30e-37,177;CL:0002032,5.77e-37,161;CL:0000837,5.77e-37,161;CL:0000134,1.81e-16,354;CL:0002320,6.92e-16,361;CL:0000219,7.84e-14,386;CL:0000048,8.80e-13,427;CL:0000034,1.19e-12,441;CL:0000723,2.06e-12,433;CL:0000784,2.71e-10,3;CL:0000775,9.14e-10,3;CL:0002393,1.65e-07,9;CL:0002397,1.65e-07,9|ontology_enrichment_development_v019=CL:0002057;1.45e-62;42!CL:0000049;3.11e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.22e-28!102;UBERON:0003061!7.22e-28!102;UBERON:0002193!3.84e-24!112;UBERON:0002371!2.74e-22!80;UBERON:0001474!9.99e-20!86;UBERON:0004765!5.82e-17!101;UBERON:0001434!5.82e-17!101;UBERON:0002405!5.24e-16!115;UBERON:0002384!1.43e-07!375;UBERON:0002204!4.80e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-54,76;UBERON:0001474,1.77e-49,82;UBERON:0002390,1.65e-46,98;UBERON:0003061,1.65e-46,98;UBERON:0004765,3.56e-44,90;UBERON:0002405,2.02e-42,93;UBERON:0002193,3.38e-41,108;UBERON:0001434,9.87e-39,100;UBERON:0002204,2.73e-20,167;UBERON:0003081,6.81e-18,203;UBERON:0002384,4.33e-15,371;UBERON:0000926,2.12e-08,315;UBERON:0004120,2.12e-08,315;UBERON:0006603,2.12e-08,315|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.382067028739756,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0.154934401160603,0.284338464974843,0.880801318004542,1.10799081706375,3.40925560699241,1.08505435357926,0.671746422719773,0.32389366601898,0,3.19876125315042,2.64513160582167,1.94067248950253,5.11343881192506,2.46700732813095,3.71647645074124,9.20615655430881,6.66017836975662,9.93225365532058,6.20542225325913,3.87290810150296,6.77132432971709,3.38836211176688,2.18324920046277,1.79778787556068,3.67300670845083,3.53021929783703,2.55734850319616,7.25672860410775,9.17532825059507,4.68847225585964,2.61188314765726,2.8369261234557,3.73693349397345,9.79869794501299,7.30076085788282,6.5156653411535,0,4.41933163185078,4.1140110367315,0.633765858935825,0,0.628975936525128,2.13424399178341,1.35159203557356,0.64290234678832,0.570025487482497,1.39241674039363,1.0959849225878,0,0,0,1.70692089026603,0,0,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,0.382273228125229,0,1.12101712596307,0,0.590129310341499,1.96505381374582,1.02800749499755,0.334372990781356,0.651844533267181,0.473447805734733,0,0.111410456885174,1.47302953737419,0.886135578334485,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,3.10037811596945,5.14795419702115,4.08603251462521,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0.30009109608440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122241444182866,0.406896178315738,0,0.402547587182052,0.320568492303233|short_description=p15@FNDC3A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_ENST00000378383_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_15_at_FNDC3A_5end | |||
|id=chr13:49550152..49550167,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.24e-35!140;CL:0002057!2.61e-30!42;CL:0002031!6.94e-29!124;CL:0002087!1.06e-28!119;CL:0000037!4.14e-28!172;CL:0000566!4.14e-28!172;CL:0000860!8.66e-28!45;CL:0000766!6.14e-27!76;CL:0000988!2.17e-26!182;CL:0002032!3.62e-25!165;CL:0000837!3.62e-25!165;CL:0000557!1.12e-23!71;CL:0000839!7.94e-23!70;CL:0002194!9.10e-22!63;CL:0000576!9.10e-22!63;CL:0000040!9.10e-22!63;CL:0000559!9.10e-22!63;CL:0002009!1.52e-21!65;CL:0000763!5.67e-18!112;CL:0000049!5.67e-18!112;CL:0000134!1.07e-08!358;CL:0002320!5.23e-08!365;CL:0000838!2.12e-07!52;CL:0000542!4.65e-07!53;CL:0000051!4.65e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-76;33!CL:0002057;2.15e-76;33!CL:0000473;1.90e-56;39!CL:0000234;1.90e-56;39!CL:0000576;2.14e-47;48!CL:0000766;1.25e-32;69!CL:0002087;6.40e-17;104!CL:0000763;2.88e-14;100!CL:0000738;7.69e-13;136!CL:0000784;2.24e-10;3!CL:0000775;1.32e-09;3!CL:0000988;7.45e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.81e-87,42;CL:0002057,1.81e-87,42;CL:0000473,1.65e-79,48;CL:0000234,1.65e-79,48;CL:0002194,2.96e-65,59;CL:0000576,2.96e-65,59;CL:0000040,2.96e-65,59;CL:0000559,2.96e-65,59;CL:0000766,9.77e-65,72;CL:0002009,8.24e-63,61;CL:0000557,1.77e-59,67;CL:0000839,2.44e-57,66;CL:0000738,1.24e-50,136;CL:0002087,1.00e-46,115;CL:0002031,3.26e-42,120;CL:0000763,9.54e-42,108;CL:0000049,9.54e-42,108;CL:0000037,2.58e-40,168;CL:0000988,1.30e-37,177;CL:0002032,5.77e-37,161;CL:0000837,5.77e-37,161;CL:0000134,1.81e-16,354;CL:0002320,6.92e-16,361;CL:0000219,7.84e-14,386;CL:0000048,8.80e-13,427;CL:0000034,1.19e-12,441;CL:0000723,2.06e-12,433;CL:0000784,2.71e-10,3;CL:0000775,9.14e-10,3;CL:0002393,1.65e-07,9;CL:0002397,1.65e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-62;42!CL:0000049;3.11e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.22e-28!102;UBERON:0003061!7.22e-28!102;UBERON:0002193!3.84e-24!112;UBERON:0002371!2.74e-22!80;UBERON:0001474!9.99e-20!86;UBERON:0004765!5.82e-17!101;UBERON:0001434!5.82e-17!101;UBERON:0002405!5.24e-16!115;UBERON:0002384!1.43e-07!375;UBERON:0002204!4.80e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-54,76;UBERON:0001474,1.77e-49,82;UBERON:0002390,1.65e-46,98;UBERON:0003061,1.65e-46,98;UBERON:0004765,3.56e-44,90;UBERON:0002405,2.02e-42,93;UBERON:0002193,3.38e-41,108;UBERON:0001434,9.87e-39,100;UBERON:0002204,2.73e-20,167;UBERON:0003081,6.81e-18,203;UBERON:0002384,4.33e-15,371;UBERON:0000926,2.12e-08,315;UBERON:0004120,2.12e-08,315;UBERON:0006603,2.12e-08,315 | |||
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| |||
|short_description=p15@FNDC3A | |||
}} |
Revision as of 02:30, 11 September 2013
Short description: | p15@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_FNDC3A_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -37bp_to_ENST00000378383_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-54 | 76 |
bone element | 1.77e-49 | 82 |
hematopoietic system | 1.65e-46 | 98 |
blood island | 1.65e-46 | 98 |
skeletal element | 3.56e-44 | 90 |
immune system | 2.02e-42 | 93 |
hemolymphoid system | 3.38e-41 | 108 |
skeletal system | 9.87e-39 | 100 |
musculoskeletal system | 2.73e-20 | 167 |
lateral plate mesoderm | 6.81e-18 | 203 |
connective tissue | 4.33e-15 | 371 |
mesoderm | 2.12e-08 | 315 |
mesoderm-derived structure | 2.12e-08 | 315 |
presumptive mesoderm | 2.12e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.