FFCP PHASE1:Hg19::chr13:49975421..49975435,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81617|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20290|TSSclassifier=N|UniProt=Q9H9S4,E9PEW4|association_with_transcript=299bp_to_ENST00000355854,ENST00000378341,NM_030925,uc001vcw.2_5end|description=CAGE_peak_10_at_CAB39L_5end|id=chr13:49975421..49975435,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000946;1.78e-15;1!CL:0000786;1.78e-15;1|ontology_enrichment_celltype_v019_2=CL:0000946,3.66e-15,1;CL:0000786,3.66e-15,1;CL:0000980,3.66e-15,1;CL:0000785,3.08e-08,2;CL:0000955,3.08e-08,2;CL:0000818,3.08e-08,2;CL:0000954,3.08e-08,2;CL:0000816,3.08e-08,2|ontology_enrichment_development_v019=CL:0000954;2.15e-08;2!UBERON:0010122;2.15e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;5.55e-16;1!DOID:4549;5.55e-16;1!DOID:5861;5.55e-16;1!DOID:6496;5.55e-16;1!DOID:114;2.15e-08;2|ontology_enrichment_disease_v019_2=DOID:3371,5.56e-16,1;DOID:4549,5.56e-16,1;DOID:5861,5.56e-16,1;DOID:6496,5.56e-16,1;DOID:114,1.86e-08,2|ontology_enrichment_uberon=UBERON:0007023!6.53e-63!115;UBERON:0001049!6.82e-30!57;UBERON:0005068!6.82e-30!57;UBERON:0006241!6.82e-30!57;UBERON:0007135!6.82e-30!57;UBERON:0002616!2.97e-24!59;UBERON:0003075!2.06e-22!86;UBERON:0007284!2.06e-22!86;UBERON:0001017!5.58e-22!82;UBERON:0002020!1.44e-21!34;UBERON:0003528!1.44e-21!34;UBERON:0001893!3.73e-21!34;UBERON:0002346!5.64e-21!90;UBERON:0000955!1.10e-20!69;UBERON:0006238!1.10e-20!69;UBERON:0002780!1.48e-20!41;UBERON:0001890!1.48e-20!41;UBERON:0006240!1.48e-20!41;UBERON:0005743!1.59e-20!86;UBERON:0003080!6.31e-20!42;UBERON:0002791!6.86e-20!33;UBERON:0001869!2.84e-18!32;UBERON:0000073!1.04e-17!94;UBERON:0001016!1.04e-17!94;UBERON:0002308!9.35e-15!9;UBERON:0000125!9.35e-15!9;UBERON:0002619!1.41e-12!22;UBERON:0003056!6.61e-12!61;UBERON:0001950!7.29e-12!20;UBERON:0002420!2.18e-11!9;UBERON:0007245!2.18e-11!9;UBERON:0010009!2.18e-11!9;UBERON:0010011!2.18e-11!9;UBERON:0000454!2.18e-11!9;UBERON:0003076!2.67e-11!15;UBERON:0003057!2.67e-11!15;UBERON:0009663!5.58e-11!7;UBERON:0000956!9.15e-11!25;UBERON:0000203!9.15e-11!25;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0000033!1.31e-10!123;UBERON:0000025!2.53e-10!194;UBERON:0002298!6.17e-10!8;UBERON:0004121!2.44e-09!169;UBERON:0000369!3.74e-09!4;UBERON:0002435!3.74e-09!4;UBERON:0000204!3.74e-09!4;UBERON:0010082!3.74e-09!4;UBERON:0000924!6.59e-09!173;UBERON:0006601!6.59e-09!173;UBERON:0004733!1.11e-08!12;UBERON:0002028!1.11e-08!12;UBERON:0007277!1.11e-08!12;UBERON:0000200!2.60e-08!6;UBERON:0004111!5.92e-08!241;UBERON:0004732!6.44e-08!13;UBERON:0001896!7.83e-08!3;UBERON:0005290!7.83e-08!3;UBERON:0010096!7.83e-08!3;UBERON:0005383!9.38e-08!3;UBERON:0005382!9.38e-08!3;UBERON:0000064!1.75e-07!219;UBERON:0006331!2.23e-07!3;UBERON:0000477!2.59e-07!286;UBERON:0002771!4.36e-07!3|ontology_enrichment_uberon_v019=UBERON:0002298;8.89e-22;6!UBERON:0001896;8.65e-20;3!UBERON:0005290;8.65e-20;3!UBERON:0004733;3.24e-11;12!UBERON:0002028;3.24e-11;12!UBERON:0004732;2.13e-10;13!UBERON:0001255;2.15e-08;2!UBERON:0000341;2.15e-08;2!UBERON:0001873;2.15e-08;2!UBERON:0002148;2.15e-08;2!UBERON:0006331;2.15e-08;2!UBERON:0009662;2.15e-08;2!UBERON:0001556;2.15e-08;2!UBERON:0000125;3.24e-07;9!UBERON:0002308;3.24e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.46e-21,6;UBERON:0001896,1.15e-19,3;UBERON:0005290,1.15e-19,3;UBERON:0010096,1.15e-19,3;UBERON:0003076,2.48e-15,15;UBERON:0003057,2.48e-15,15;UBERON:0007023,6.66e-14,114;UBERON:0004733,4.14e-11,12;UBERON:0002028,4.14e-11,12;UBERON:0007277,4.14e-11,12;UBERON:0004732,2.67e-10,13;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0001873,1.61e-08,2;UBERON:0010122,1.61e-08,2;UBERON:0001255,2.00e-08,2;UBERON:0001556,2.00e-08,2;UBERON:0000341,2.67e-08,2;UBERON:0002148,2.87e-08,2;UBERON:0006331,2.87e-08,2;UBERON:0009662,2.87e-08,2;UBERON:0000125,3.24e-07,9;UBERON:0002308,3.24e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81617 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20290 | |||
|TSSclassifier=N | |||
|UniProt=Q9H9S4,E9PEW4 | |||
|association_with_transcript=299bp_to_ENST00000355854,ENST00000378341,NM_030925,uc001vcw.2_5end | |||
|description=CAGE_peak_10_at_CAB39L_5end | |||
|id=chr13:49975421..49975435,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.78e-15;1!CL:0000786;1.78e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.66e-15,1;CL:0000786,3.66e-15,1;CL:0000980,3.66e-15,1;CL:0000785,3.08e-08,2;CL:0000955,3.08e-08,2;CL:0000818,3.08e-08,2;CL:0000954,3.08e-08,2;CL:0000816,3.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;2.15e-08;2!UBERON:0010122;2.15e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.55e-16;1!DOID:4549;5.55e-16;1!DOID:5861;5.55e-16;1!DOID:6496;5.55e-16;1!DOID:114;2.15e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.56e-16,1;DOID:4549,5.56e-16,1;DOID:5861,5.56e-16,1;DOID:6496,5.56e-16,1;DOID:114,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.53e-63!115;UBERON:0001049!6.82e-30!57;UBERON:0005068!6.82e-30!57;UBERON:0006241!6.82e-30!57;UBERON:0007135!6.82e-30!57;UBERON:0002616!2.97e-24!59;UBERON:0003075!2.06e-22!86;UBERON:0007284!2.06e-22!86;UBERON:0001017!5.58e-22!82;UBERON:0002020!1.44e-21!34;UBERON:0003528!1.44e-21!34;UBERON:0001893!3.73e-21!34;UBERON:0002346!5.64e-21!90;UBERON:0000955!1.10e-20!69;UBERON:0006238!1.10e-20!69;UBERON:0002780!1.48e-20!41;UBERON:0001890!1.48e-20!41;UBERON:0006240!1.48e-20!41;UBERON:0005743!1.59e-20!86;UBERON:0003080!6.31e-20!42;UBERON:0002791!6.86e-20!33;UBERON:0001869!2.84e-18!32;UBERON:0000073!1.04e-17!94;UBERON:0001016!1.04e-17!94;UBERON:0002308!9.35e-15!9;UBERON:0000125!9.35e-15!9;UBERON:0002619!1.41e-12!22;UBERON:0003056!6.61e-12!61;UBERON:0001950!7.29e-12!20;UBERON:0002420!2.18e-11!9;UBERON:0007245!2.18e-11!9;UBERON:0010009!2.18e-11!9;UBERON:0010011!2.18e-11!9;UBERON:0000454!2.18e-11!9;UBERON:0003076!2.67e-11!15;UBERON:0003057!2.67e-11!15;UBERON:0009663!5.58e-11!7;UBERON:0000956!9.15e-11!25;UBERON:0000203!9.15e-11!25;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0000033!1.31e-10!123;UBERON:0000025!2.53e-10!194;UBERON:0002298!6.17e-10!8;UBERON:0004121!2.44e-09!169;UBERON:0000369!3.74e-09!4;UBERON:0002435!3.74e-09!4;UBERON:0000204!3.74e-09!4;UBERON:0010082!3.74e-09!4;UBERON:0000924!6.59e-09!173;UBERON:0006601!6.59e-09!173;UBERON:0004733!1.11e-08!12;UBERON:0002028!1.11e-08!12;UBERON:0007277!1.11e-08!12;UBERON:0000200!2.60e-08!6;UBERON:0004111!5.92e-08!241;UBERON:0004732!6.44e-08!13;UBERON:0001896!7.83e-08!3;UBERON:0005290!7.83e-08!3;UBERON:0010096!7.83e-08!3;UBERON:0005383!9.38e-08!3;UBERON:0005382!9.38e-08!3;UBERON:0000064!1.75e-07!219;UBERON:0006331!2.23e-07!3;UBERON:0000477!2.59e-07!286;UBERON:0002771!4.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;8.89e-22;6!UBERON:0001896;8.65e-20;3!UBERON:0005290;8.65e-20;3!UBERON:0004733;3.24e-11;12!UBERON:0002028;3.24e-11;12!UBERON:0004732;2.13e-10;13!UBERON:0001255;2.15e-08;2!UBERON:0000341;2.15e-08;2!UBERON:0001873;2.15e-08;2!UBERON:0002148;2.15e-08;2!UBERON:0006331;2.15e-08;2!UBERON:0009662;2.15e-08;2!UBERON:0001556;2.15e-08;2!UBERON:0000125;3.24e-07;9!UBERON:0002308;3.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.46e-21,6;UBERON:0001896,1.15e-19,3;UBERON:0005290,1.15e-19,3;UBERON:0010096,1.15e-19,3;UBERON:0003076,2.48e-15,15;UBERON:0003057,2.48e-15,15;UBERON:0007023,6.66e-14,114;UBERON:0004733,4.14e-11,12;UBERON:0002028,4.14e-11,12;UBERON:0007277,4.14e-11,12;UBERON:0004732,2.67e-10,13;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0001873,1.61e-08,2;UBERON:0010122,1.61e-08,2;UBERON:0001255,2.00e-08,2;UBERON:0001556,2.00e-08,2;UBERON:0000341,2.67e-08,2;UBERON:0002148,2.87e-08,2;UBERON:0006331,2.87e-08,2;UBERON:0009662,2.87e-08,2;UBERON:0000125,3.24e-07,9;UBERON:0002308,3.24e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.614321404198464,0,0.703347082052564,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,1.28236427328014,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0.884634079449797,0.591095237907095,0.438770794307945,0,0,0.846452843541768,0,0,0.628303510868405,0.434589487688032,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,4.0690479671536,0,0,0,0,0.269604531922708,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.969890164884194,7.23700238870302,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.558564802544508,0.229160424011684,0,0,1.28767814440971,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.05786081394152,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0.244052529803926,0.3755727921195,1.14681839138014,1.10929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0.615349092722265,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,1.03710588800201,0,0,0.131545547125698,0,0,0.313972371402056,0.314231179832004,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0.980593287015622,0,0.981542335574726,1.78227840196252,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0.430018749454354,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.724030971033267,1.0661699095049,0,0,0,0,0.12729431655633,0,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,0,0.855690109280065,0,0,0.201273793591026,0 | |||
|short_description=p10@CAB39L | |||
}} |
Revision as of 02:31, 11 September 2013
Short description: | p10@CAB39L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CAB39L_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_ENST00000355854, ENST00000378341, NM_030925, uc001vcw.2_5end |
EntrezGene: | CAB39L |
HGNC: | 20290 |
UniProt: | Q9H9S4E9PEW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.66e-15 | 1 |
plasma cell | 3.66e-15 | 1 |
plasmablast | 3.66e-15 | 1 |
mature B cell | 3.08e-08 | 2 |
pre-B-II cell | 3.08e-08 | 2 |
transitional stage B cell | 3.08e-08 | 2 |
small pre-B-II cell | 3.08e-08 | 2 |
immature B cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
brainstem | 1.46e-21 | 6 |
medulla oblongata | 1.15e-19 | 3 |
myelencephalon | 1.15e-19 | 3 |
future myelencephalon | 1.15e-19 | 3 |
posterior neural tube | 2.48e-15 | 15 |
chordal neural plate | 2.48e-15 | 15 |
adult organism | 6.66e-14 | 114 |
segmental subdivision of hindbrain | 4.14e-11 | 12 |
hindbrain | 4.14e-11 | 12 |
presumptive hindbrain | 4.14e-11 | 12 |
segmental subdivision of nervous system | 2.67e-10 | 13 |
neural tube | 1.09e-08 | 56 |
neural rod | 1.09e-08 | 56 |
future spinal cord | 1.09e-08 | 56 |
neural keel | 1.09e-08 | 56 |
caudate nucleus | 1.61e-08 | 2 |
future caudate nucleus | 1.61e-08 | 2 |
urinary bladder | 2.00e-08 | 2 |
lower urinary tract | 2.00e-08 | 2 |
throat | 2.67e-08 | 2 |
locus ceruleus | 2.87e-08 | 2 |
brainstem nucleus | 2.87e-08 | 2 |
hindbrain nucleus | 2.87e-08 | 2 |
neural nucleus | 3.24e-07 | 9 |
nucleus of brain | 3.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.56e-16 | 1 |
extraosseous chondrosarcoma | 5.56e-16 | 1 |
myxoid chondrosarcoma | 5.56e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 5.56e-16 | 1 |
heart disease | 1.86e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.