FFCP PHASE1:Hg19::chr14:36989358..36989378,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11825|TSSclassifier=S|UniProt=|association_with_transcript=-19bp_to_ENST00000522719_5end|coexpression_cluster_id=C1394|description=CAGE_peak_3_at_NKX2-1_5end|id=chr14:36989358..36989378,-|ontology_enrichment_celltype=CL:0002368!8.16e-12!13;CL:0002076!1.17e-09!43;CL:0000223!1.15e-07!59|ontology_enrichment_celltype_v019=CL:0000082;1.66e-07;19!CL:0002553;2.99e-07;1!CL:0002368;4.63e-07;13!CL:0000167;5.06e-07;1!CL:0000164;5.06e-07;1!CL:0000502;5.06e-07;1!CL:0000172;5.06e-07;1!CL:0000173;5.06e-07;1|ontology_enrichment_celltype_v019_2=CL:0000082,1.54e-07,19;CL:0002553,2.99e-07,1;CL:0002368,3.97e-07,13;CL:0000167,4.78e-07,1;CL:0000164,4.78e-07,1;CL:0000502,4.78e-07,1;CL:0000172,4.78e-07,1;CL:0000173,4.78e-07,1;CL:0002351,4.78e-07,1|ontology_enrichment_development_v019=UBERON:0007123;5.36e-19;5!UBERON:0008947;9.04e-18;29!UBERON:0001041;1.29e-08;30!CL:0002351;5.06e-07;1|ontology_enrichment_disease=DOID:305!2.31e-11!106;DOID:0050687!5.53e-09!143;DOID:162!3.83e-08!235;DOID:14566!9.76e-08!239|ontology_enrichment_disease_v019=DOID:0050615;4.63e-09;16!DOID:3112;2.82e-07;1!DOID:3347;4.13e-07;1!DOID:0050619;5.06e-07;1!DOID:1357;5.06e-07;1!DOID:4430;5.06e-07;1|ontology_enrichment_disease_v019_2=DOID:0050615,4.71e-09,16;DOID:305,1.69e-07,106;DOID:3112,2.82e-07,1;DOID:3347,4.51e-07,1;DOID:4430,4.78e-07,1;DOID:0050619,5.06e-07,1;DOID:1357,5.06e-07,1;DOID:162,8.56e-07,235|ontology_enrichment_uberon=UBERON:0008947!1.26e-21!38;UBERON:0003258!1.26e-21!38;UBERON:0000065!1.97e-20!53;UBERON:0001004!3.15e-17!72;UBERON:0001737!6.93e-14!9;UBERON:0004119!3.55e-12!169;UBERON:0000925!3.55e-12!169;UBERON:0006595!3.55e-12!169;UBERON:0000072!1.10e-11!46;UBERON:0005178!8.54e-11!34;UBERON:0002224!8.54e-11!34;UBERON:0001007!8.97e-11!155;UBERON:0001555!8.97e-11!155;UBERON:0007026!8.97e-11!155;UBERON:0005181!2.25e-10!35;UBERON:0002048!3.53e-10!22;UBERON:0000117!3.53e-10!22;UBERON:0000171!3.53e-10!22;UBERON:0000170!3.53e-10!22;UBERON:0005597!3.53e-10!22;UBERON:0000118!3.53e-10!22;UBERON:0001041!4.29e-10!98;UBERON:0002780!1.35e-08!41;UBERON:0001890!1.35e-08!41;UBERON:0006240!1.35e-08!41;UBERON:0000077!1.51e-08!130;UBERON:0004921!1.83e-08!129;UBERON:0004185!1.83e-08!129;UBERON:0003080!2.64e-08!42;UBERON:0002046!4.52e-08!5;UBERON:0004117!4.52e-08!5;UBERON:0007689!4.52e-08!5;UBERON:0007123!4.52e-08!5;UBERON:0003091!4.52e-08!5;UBERON:0001869!7.23e-08!32;UBERON:0002791!1.52e-07!33;UBERON:0002020!3.04e-07!34;UBERON:0003528!3.04e-07!34;UBERON:0001893!3.04e-07!34;UBERON:0005153!3.51e-07!37;UBERON:0009663!8.58e-07!7|ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-19;5!UBERON:0002048;1.43e-15;22!UBERON:0000117;1.43e-15;22!UBERON:0000171;1.43e-15;22!UBERON:0000170;1.43e-15;22!UBERON:0000065;1.09e-14;44!UBERON:0001004;2.30e-09;65!UBERON:0000974;9.19e-09;6!UBERON:0005178;2.03e-08;34!UBERON:0002224;2.03e-08;34!UBERON:0005181;1.08e-07;35!UBERON:0004802;1.66e-07;19!UBERON:0000115;1.66e-07;19!UBERON:0000072;1.68e-07;37!UBERON:0001764;5.06e-07;1!UBERON:0001825;5.06e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.25e-19,5;UBERON:0004117,5.25e-19,5;UBERON:0007689,5.25e-19,5;UBERON:0007123,5.25e-19,5;UBERON:0003091,5.25e-19,5;UBERON:0001004,6.14e-16,74;UBERON:0008947,6.19e-16,38;UBERON:0003258,6.19e-16,38;UBERON:0002048,1.13e-15,22;UBERON:0000117,1.13e-15,22;UBERON:0000171,1.13e-15,22;UBERON:0000170,1.13e-15,22;UBERON:0005597,1.13e-15,22;UBERON:0000118,1.13e-15,22;UBERON:0000065,5.52e-15,54;UBERON:0004119,3.06e-12,160;UBERON:0000925,3.06e-12,160;UBERON:0006595,3.06e-12,160;UBERON:0005153,3.35e-11,37;UBERON:0001007,3.60e-11,145;UBERON:0001555,3.60e-11,145;UBERON:0007026,3.60e-11,145;UBERON:0005911,6.57e-11,82;UBERON:0005178,1.05e-09,34;UBERON:0002224,1.05e-09,34;UBERON:0005181,2.16e-09,35;UBERON:0009722,1.07e-08,11;UBERON:0007690,1.07e-08,11;UBERON:0005157,1.71e-08,47;UBERON:0004802,1.54e-07,19;UBERON:0000115,1.54e-07,19;UBERON:0001764,5.06e-07,1;UBERON:0001825,5.06e-07,1;UBERON:0001041,5.51e-07,87;UBERON:0002171,7.57e-07,1;UBERON:0006518,7.57e-07,1;UBERON:0008949,7.57e-07,1;UBERON:0000101,7.57e-07,1;UBERON:0002167,7.57e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,13.9560233594486,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,1.18009283054671,0.241011029883482,0.661763836394364,1.08939722046203,1.18635309555548,0.808987848960987,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.10052897241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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000522719_5end | |||
|coexpression_cluster_id=C1394 | |||
|description=CAGE_peak_3_at_NKX2-1_5end | |||
|id=chr14:36989358..36989378,- | |||
|ontology_enrichment_celltype=CL:0002368!8.16e-12!13;CL:0002076!1.17e-09!43;CL:0000223!1.15e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.66e-07;19!CL:0002553;2.99e-07;1!CL:0002368;4.63e-07;13!CL:0000167;5.06e-07;1!CL:0000164;5.06e-07;1!CL:0000502;5.06e-07;1!CL:0000172;5.06e-07;1!CL:0000173;5.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.54e-07,19;CL:0002553,2.99e-07,1;CL:0002368,3.97e-07,13;CL:0000167,4.78e-07,1;CL:0000164,4.78e-07,1;CL:0000502,4.78e-07,1;CL:0000172,4.78e-07,1;CL:0000173,4.78e-07,1;CL:0002351,4.78e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.36e-19;5!UBERON:0008947;9.04e-18;29!UBERON:0001041;1.29e-08;30!CL:0002351;5.06e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.31e-11!106;DOID:0050687!5.53e-09!143;DOID:162!3.83e-08!235;DOID:14566!9.76e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:0050615;4.63e-09;16!DOID:3112;2.82e-07;1!DOID:3347;4.13e-07;1!DOID:0050619;5.06e-07;1!DOID:1357;5.06e-07;1!DOID:4430;5.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,4.71e-09,16;DOID:305,1.69e-07,106;DOID:3112,2.82e-07,1;DOID:3347,4.51e-07,1;DOID:4430,4.78e-07,1;DOID:0050619,5.06e-07,1;DOID:1357,5.06e-07,1;DOID:162,8.56e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.26e-21!38;UBERON:0003258!1.26e-21!38;UBERON:0000065!1.97e-20!53;UBERON:0001004!3.15e-17!72;UBERON:0001737!6.93e-14!9;UBERON:0004119!3.55e-12!169;UBERON:0000925!3.55e-12!169;UBERON:0006595!3.55e-12!169;UBERON:0000072!1.10e-11!46;UBERON:0005178!8.54e-11!34;UBERON:0002224!8.54e-11!34;UBERON:0001007!8.97e-11!155;UBERON:0001555!8.97e-11!155;UBERON:0007026!8.97e-11!155;UBERON:0005181!2.25e-10!35;UBERON:0002048!3.53e-10!22;UBERON:0000117!3.53e-10!22;UBERON:0000171!3.53e-10!22;UBERON:0000170!3.53e-10!22;UBERON:0005597!3.53e-10!22;UBERON:0000118!3.53e-10!22;UBERON:0001041!4.29e-10!98;UBERON:0002780!1.35e-08!41;UBERON:0001890!1.35e-08!41;UBERON:0006240!1.35e-08!41;UBERON:0000077!1.51e-08!130;UBERON:0004921!1.83e-08!129;UBERON:0004185!1.83e-08!129;UBERON:0003080!2.64e-08!42;UBERON:0002046!4.52e-08!5;UBERON:0004117!4.52e-08!5;UBERON:0007689!4.52e-08!5;UBERON:0007123!4.52e-08!5;UBERON:0003091!4.52e-08!5;UBERON:0001869!7.23e-08!32;UBERON:0002791!1.52e-07!33;UBERON:0002020!3.04e-07!34;UBERON:0003528!3.04e-07!34;UBERON:0001893!3.04e-07!34;UBERON:0005153!3.51e-07!37;UBERON:0009663!8.58e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-19;5!UBERON:0002048;1.43e-15;22!UBERON:0000117;1.43e-15;22!UBERON:0000171;1.43e-15;22!UBERON:0000170;1.43e-15;22!UBERON:0000065;1.09e-14;44!UBERON:0001004;2.30e-09;65!UBERON:0000974;9.19e-09;6!UBERON:0005178;2.03e-08;34!UBERON:0002224;2.03e-08;34!UBERON:0005181;1.08e-07;35!UBERON:0004802;1.66e-07;19!UBERON:0000115;1.66e-07;19!UBERON:0000072;1.68e-07;37!UBERON:0001764;5.06e-07;1!UBERON:0001825;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.25e-19,5;UBERON:0004117,5.25e-19,5;UBERON:0007689,5.25e-19,5;UBERON:0007123,5.25e-19,5;UBERON:0003091,5.25e-19,5;UBERON:0001004,6.14e-16,74;UBERON:0008947,6.19e-16,38;UBERON:0003258,6.19e-16,38;UBERON:0002048,1.13e-15,22;UBERON:0000117,1.13e-15,22;UBERON:0000171,1.13e-15,22;UBERON:0000170,1.13e-15,22;UBERON:0005597,1.13e-15,22;UBERON:0000118,1.13e-15,22;UBERON:0000065,5.52e-15,54;UBERON:0004119,3.06e-12,160;UBERON:0000925,3.06e-12,160;UBERON:0006595,3.06e-12,160;UBERON:0005153,3.35e-11,37;UBERON:0001007,3.60e-11,145;UBERON:0001555,3.60e-11,145;UBERON:0007026,3.60e-11,145;UBERON:0005911,6.57e-11,82;UBERON:0005178,1.05e-09,34;UBERON:0002224,1.05e-09,34;UBERON:0005181,2.16e-09,35;UBERON:0009722,1.07e-08,11;UBERON:0007690,1.07e-08,11;UBERON:0005157,1.71e-08,47;UBERON:0004802,1.54e-07,19;UBERON:0000115,1.54e-07,19;UBERON:0001764,5.06e-07,1;UBERON:0001825,5.06e-07,1;UBERON:0001041,5.51e-07,87;UBERON:0002171,7.57e-07,1;UBERON:0006518,7.57e-07,1;UBERON:0008949,7.57e-07,1;UBERON:0000101,7.57e-07,1;UBERON:0002167,7.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,13.9560233594486,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,1.18009283054671,0.241011029883482,0.661763836394364,1.08939722046203,1.18635309555548,0.808987848960987,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,1.92295876118521,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0.960950336825531,0.765676274967505,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0,0,1.1249555075237,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,23.3913358269345,0,0,0,0,0,1.08536794762867,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0.242780379534093,0,0,0.30607276163049,0,0.150323419414493,0.311064574191741,0,0.330991955875499,0.313932918407225,0,0,0,0.520679215005393,0.293977192243133,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,3.12882212375685,0,0,0.799238438328521,0,1.25990255782507,0,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,1.0063040627978,0,0,23.6544753803471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66968531419237,5.03053776318931,1.65695622138878,0,0,0,0,0,0,0,0,3.14108192500469,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,4.64999738562288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80627823114017,0,0,0.256916900385838,0,0,0,0.252071696221718,0,0,0,1.07962490351128,1.29766695682514,0,0,0,4.1421595563606,0.198916222116275,0,0.20170506870352,0,0,10.3176308031361,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,13.4740978607724,0,0,0.314231179832004,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.45178432815584,0,13.2847302338673,0,0,0,0,3.53514820652439,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643264296743914,0,0,0,0,0.103432995861895,0.426467963801962,2.61870874610114,0,0,6.27938430451435,4.51894823774971,7.88257036937055,0,0,0,0.573777643141411,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NKX2-1 | |||
}} |
Revision as of 04:28, 11 September 2013
Short description: | p3@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NKX2-1_5end |
Coexpression cluster: | C1394_large_bronchioalveolar_prostate_nonsmall_papillary_small_Alveolar |
Association with transcript: | -19bp_to_ENST00000522719_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.54e-07 | 19 |
lung fibroblast | 2.99e-07 | 1 |
respiratory epithelial cell | 3.97e-07 | 13 |
peptide hormone secreting cell | 4.78e-07 | 1 |
enteroendocrine cell | 4.78e-07 | 1 |
type D enteroendocrine cell | 4.78e-07 | 1 |
somatostatin secreting cell | 4.78e-07 | 1 |
pancreatic D cell | 4.78e-07 | 1 |
progenitor cell of endocrine pancreas | 4.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 4.71e-09 | 16 |
carcinoma | 1.69e-07 | 106 |
papillary adenocarcinoma | 2.82e-07 | 1 |
osteosarcoma | 4.51e-07 | 1 |
somatostatinoma | 4.78e-07 | 1 |
paranasal sinus cancer | 5.06e-07 | 1 |
maxillary sinus cancer | 5.06e-07 | 1 |
cancer | 8.56e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.