FFCP PHASE1:Hg19::chr14:51135608..51135616,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr14:51135608..51135616,-|id=chr14:51135608..51135616,-|ontology_enrichment_celltype=CL:0000860!1.46e-50!45;CL:0002057!1.48e-46!42;CL:0000557!3.94e-35!71;CL:0000839!1.06e-33!70;CL:0002009!8.82e-33!65;CL:0002194!5.00e-32!63;CL:0000576!5.00e-32!63;CL:0000040!5.00e-32!63;CL:0000559!5.00e-32!63;CL:0000766!5.05e-32!76;CL:0000763!2.09e-21!112;CL:0000049!2.09e-21!112;CL:0002031!3.56e-17!124;CL:0000738!8.32e-17!140;CL:0002087!5.54e-16!119;CL:0000037!1.05e-13!172;CL:0000566!1.05e-13!172;CL:0002032!2.91e-12!165;CL:0000837!2.91e-12!165;CL:0000988!3.02e-12!182|ontology_enrichment_celltype_v019=CL:0000860;3.24e-83;33!CL:0002057;3.24e-83;33!CL:0000473;1.73e-56;39!CL:0000234;1.73e-56;39!CL:0000576;5.50e-49;48!CL:0000766;3.77e-32;69!CL:0002087;2.56e-15;104!CL:0000763;5.33e-15;100!CL:0002393;4.44e-12;6!CL:0002397;4.44e-12;6!CL:0000738;2.46e-07;136!CL:0000097;6.97e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-93,42;CL:0002057,2.24e-93,42;CL:0000473,2.91e-81,48;CL:0000234,2.91e-81,48;CL:0000839,6.26e-68,66;CL:0000557,7.07e-67,67;CL:0002194,2.70e-64,59;CL:0000576,2.70e-64,59;CL:0000040,2.70e-64,59;CL:0000559,2.70e-64,59;CL:0002009,4.19e-62,61;CL:0000766,4.81e-62,72;CL:0000763,2.57e-40,108;CL:0000049,2.57e-40,108;CL:0002031,6.11e-36,120;CL:0002087,1.80e-31,115;CL:0000738,2.71e-31,136;CL:0002032,7.27e-26,161;CL:0000837,7.27e-26,161;CL:0000037,1.25e-24,168;CL:0000988,3.46e-23,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0002393,3.13e-08,9;CL:0002397,3.13e-08,9;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000097,6.76e-07,5;CL:0002028,6.76e-07,5|ontology_enrichment_development_v019=CL:0002057;1.73e-65;42!CL:0000049;5.99e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.11e-31!80;UBERON:0001474!1.34e-28!86;UBERON:0002193!1.25e-25!112;UBERON:0002390!5.73e-25!102;UBERON:0003061!5.73e-25!102;UBERON:0004765!7.96e-24!101;UBERON:0001434!7.96e-24!101;UBERON:0002405!5.62e-22!115;UBERON:0002204!5.49e-17!167;UBERON:0003081!4.26e-12!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-58,76;UBERON:0001474,4.01e-54,82;UBERON:0004765,4.90e-49,90;UBERON:0002405,2.37e-47,93;UBERON:0002390,9.04e-45,98;UBERON:0003061,9.04e-45,98;UBERON:0001434,8.26e-44,100;UBERON:0002193,2.57e-40,108;UBERON:0002204,8.42e-25,167;UBERON:0003081,1.00e-19,203;UBERON:0000926,1.66e-12,315;UBERON:0004120,1.66e-12,315;UBERON:0006603,1.66e-12,315;UBERON:0002384,5.43e-10,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0.880801318004542,2.76997704265939,2.00544447470142,1.51907609501096,0,0,0,0,0,0.727752183563449,0.929716147622738,0,3.09706370895104,3.16461631554365,3.07392847834921,4.49316236788312,2.06847408441971,2.5819387343353,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,2.75475503133812,1.60464513538047,2.55734850319616,0.329851300186716,1.19678194572979,0,2.61188314765726,2.26954089876456,4.35975574296902,3.26623264833766,2.08593167368081,3.47502151528187,2.42159801053347,1.47311054395026,1.58231193720442,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,1.65862492432618,0.576479813667846,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0.488419611665847,0,0,0,0,0,0,0,0,0|short_description=p@chr14:51135608..51135616,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr14:51135608..51135616,- | |||
|id=chr14:51135608..51135616,- | |||
|ontology_enrichment_celltype=CL:0000860!1.46e-50!45;CL:0002057!1.48e-46!42;CL:0000557!3.94e-35!71;CL:0000839!1.06e-33!70;CL:0002009!8.82e-33!65;CL:0002194!5.00e-32!63;CL:0000576!5.00e-32!63;CL:0000040!5.00e-32!63;CL:0000559!5.00e-32!63;CL:0000766!5.05e-32!76;CL:0000763!2.09e-21!112;CL:0000049!2.09e-21!112;CL:0002031!3.56e-17!124;CL:0000738!8.32e-17!140;CL:0002087!5.54e-16!119;CL:0000037!1.05e-13!172;CL:0000566!1.05e-13!172;CL:0002032!2.91e-12!165;CL:0000837!2.91e-12!165;CL:0000988!3.02e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-83;33!CL:0002057;3.24e-83;33!CL:0000473;1.73e-56;39!CL:0000234;1.73e-56;39!CL:0000576;5.50e-49;48!CL:0000766;3.77e-32;69!CL:0002087;2.56e-15;104!CL:0000763;5.33e-15;100!CL:0002393;4.44e-12;6!CL:0002397;4.44e-12;6!CL:0000738;2.46e-07;136!CL:0000097;6.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-93,42;CL:0002057,2.24e-93,42;CL:0000473,2.91e-81,48;CL:0000234,2.91e-81,48;CL:0000839,6.26e-68,66;CL:0000557,7.07e-67,67;CL:0002194,2.70e-64,59;CL:0000576,2.70e-64,59;CL:0000040,2.70e-64,59;CL:0000559,2.70e-64,59;CL:0002009,4.19e-62,61;CL:0000766,4.81e-62,72;CL:0000763,2.57e-40,108;CL:0000049,2.57e-40,108;CL:0002031,6.11e-36,120;CL:0002087,1.80e-31,115;CL:0000738,2.71e-31,136;CL:0002032,7.27e-26,161;CL:0000837,7.27e-26,161;CL:0000037,1.25e-24,168;CL:0000988,3.46e-23,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0002393,3.13e-08,9;CL:0002397,3.13e-08,9;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000097,6.76e-07,5;CL:0002028,6.76e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-65;42!CL:0000049;5.99e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-31!80;UBERON:0001474!1.34e-28!86;UBERON:0002193!1.25e-25!112;UBERON:0002390!5.73e-25!102;UBERON:0003061!5.73e-25!102;UBERON:0004765!7.96e-24!101;UBERON:0001434!7.96e-24!101;UBERON:0002405!5.62e-22!115;UBERON:0002204!5.49e-17!167;UBERON:0003081!4.26e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-58,76;UBERON:0001474,4.01e-54,82;UBERON:0004765,4.90e-49,90;UBERON:0002405,2.37e-47,93;UBERON:0002390,9.04e-45,98;UBERON:0003061,9.04e-45,98;UBERON:0001434,8.26e-44,100;UBERON:0002193,2.57e-40,108;UBERON:0002204,8.42e-25,167;UBERON:0003081,1.00e-19,203;UBERON:0000926,1.66e-12,315;UBERON:0004120,1.66e-12,315;UBERON:0006603,1.66e-12,315;UBERON:0002384,5.43e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0.880801318004542,2.76997704265939,2.00544447470142,1.51907609501096,0,0,0,0,0,0.727752183563449,0.929716147622738,0,3.09706370895104,3.16461631554365,3.07392847834921,4.49316236788312,2.06847408441971,2.5819387343353,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,2.75475503133812,1.60464513538047,2.55734850319616,0.329851300186716,1.19678194572979,0,2.61188314765726,2.26954089876456,4.35975574296902,3.26623264833766,2.08593167368081,3.47502151528187,2.42159801053347,1.47311054395026,1.58231193720442,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,1.65862492432618,0.576479813667846,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:51135608..51135616,- | |||
}} |
Revision as of 04:40, 11 September 2013
Short description: | p@chr14:51135608..51135616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:51135608..51135616, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-58 | 76 |
bone element | 4.01e-54 | 82 |
skeletal element | 4.90e-49 | 90 |
immune system | 2.37e-47 | 93 |
hematopoietic system | 9.04e-45 | 98 |
blood island | 9.04e-45 | 98 |
skeletal system | 8.26e-44 | 100 |
hemolymphoid system | 2.57e-40 | 108 |
musculoskeletal system | 8.42e-25 | 167 |
lateral plate mesoderm | 1.00e-19 | 203 |
mesoderm | 1.66e-12 | 315 |
mesoderm-derived structure | 1.66e-12 | 315 |
presumptive mesoderm | 1.66e-12 | 315 |
connective tissue | 5.43e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.