FFCP PHASE1:Hg19::chr14:70237706..70237725,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6430|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10787|TSSclassifier=W|UniProt=|association_with_transcript=108bp_to_ENST00000554929_5end|description=CAGE_peak_12_at_SRSF5_5end|id=chr14:70237706..70237725,+|ontology_enrichment_celltype=CL:0000738!3.31e-18!140;CL:0002031!4.10e-16!124;CL:0002057!8.83e-16!42;CL:0002087!1.19e-15!119;CL:0000860!3.08e-15!45;CL:0000037!4.09e-15!172;CL:0000566!4.09e-15!172;CL:0002032!7.04e-15!165;CL:0000837!7.04e-15!165;CL:0000988!2.61e-13!182;CL:0000766!1.47e-12!76;CL:0000839!3.88e-10!70;CL:0002194!7.90e-10!63;CL:0000576!7.90e-10!63;CL:0000040!7.90e-10!63;CL:0000559!7.90e-10!63;CL:0000557!8.91e-10!71;CL:0002009!1.48e-09!65;CL:0000763!5.51e-09!112;CL:0000049!5.51e-09!112;CL:0000838!6.44e-07!52|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000473;1.25e-14;39!CL:0000234;1.25e-14;39!CL:0000576;3.92e-12;48!CL:0000791;2.85e-11;18!CL:0000789;2.85e-11;18!CL:0002419;2.85e-11;18!CL:0000766;4.50e-09;69!CL:0000084;5.54e-08;25!CL:0002087;9.99e-08;104!CL:0000624;1.91e-07;6|ontology_enrichment_celltype_v019_2=CL:0000860,3.59e-23,42;CL:0002057,3.59e-23,42;CL:0000738,5.60e-23,136;CL:0000473,8.26e-22,48;CL:0000234,8.26e-22,48;CL:0002087,2.43e-21,115;CL:0002031,2.32e-20,120;CL:0000037,2.46e-18,168;CL:0002032,1.25e-17,161;CL:0000837,1.25e-17,161;CL:0000766,1.61e-17,72;CL:0000988,2.75e-16,177;CL:0002009,3.95e-15,61;CL:0002194,4.31e-15,59;CL:0000576,4.31e-15,59;CL:0000040,4.31e-15,59;CL:0000559,4.31e-15,59;CL:0000557,1.12e-14,67;CL:0000839,3.20e-14,66;CL:0000791,4.89e-12,18;CL:0000789,4.89e-12,18;CL:0002420,4.89e-12,18;CL:0002419,4.89e-12,18;CL:0000790,4.89e-12,18;CL:0000763,2.60e-11,108;CL:0000049,2.60e-11,108;CL:0000084,2.26e-08,25;CL:0000827,2.26e-08,25;CL:0000624,1.56e-07,6;CL:0000625,2.31e-07,11;CL:0000838,6.94e-07,52|ontology_enrichment_development_v019=CL:0002057;6.78e-17;42!CL:0000790;2.85e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.52e-10!102;UBERON:0003061!1.52e-10!102;UBERON:0002193!3.24e-09!112;UBERON:0002371!5.12e-09!80;UBERON:0001474!2.25e-08!86;UBERON:0004765!5.81e-07!101;UBERON:0001434!5.81e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-14,76;UBERON:0002390,8.21e-14,98;UBERON:0003061,8.21e-14,98;UBERON:0001474,2.19e-12,82;UBERON:0002193,4.81e-12,108;UBERON:0002405,3.81e-11,93;UBERON:0004765,7.57e-11,90;UBERON:0001434,7.18e-10,100|phase1_expression=0.181678379270557,1.71280419112787,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.251085279189606,0.840547463227464,0.492603536699674,0.157421562627358,1.18009283054671,1.53531759238885,0.928896739896456,0,0,0,0.309868802321207,0.426507697462265,2.05520307534393,0.553995408531877,3.00816671205213,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,0.872389432677388,0,1.21292030593908,2.78914844286822,0.822335776043652,0,1.7261543539329,2.0492856522328,2.60130452877444,3.10271112662957,2.5819387343353,2.70852973188684,2.82363509313907,1.36453075028923,2.02251136000576,2.14258724659632,0.962787081228281,4.47535988059329,0.659702600373432,3.78980949481101,1.27867425159808,3.48251086354301,1.13477044938228,1.86846674698672,2.26123798731069,2.08593167368081,3.9093992046921,1.81619850790011,1.10483290796269,2.53169909952708,3.16882929467913,2.33864729961548,1.46761051855863,1.46027220490444,1.50176892841506,1.12507910687956,0.285012743741249,1.39241674039363,0.547992461293902,0,0.546138611262131,2.66852776159066,0.426730222566507,2.40237592221607,0.574752439954483,0.661044872784862,0,1.1384259382189,2.93618594685469,0.382273228125229,2.64342657158052,0.560508562981536,0.790152254325231,1.180258620683,4.32311839024081,2.87842098599313,1.67186495390678,1.62961133316795,1.89379122293893,0,2.22820913770347,2.65145316727353,1.77227115666897,1.89562704635511,1.5370958367081,1.43065282315866,0.822189523018381,1.65810010671509,2.02862160014537,3.41059095272739,3.74557159325598,3.1360657141493,0.793165398882963,2.29932296161153,1.71813722741315,2.02415753615602,1.91139248594458,1.95325036156926,1.90090408889675,1.35517607169996,1.4078527226986,0,2.13099526839615,0,1.61285394579786,3.7441627409691,1.44824403882799,0,0,0.12786256184353,0.722878304769133,0,0.579386075843295,0,1.45990461090791,0.378139268656271,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0.17859945656816,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0.993943903390637,0.12663051166458,0.926864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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=108bp_to_ENST00000554929_5end | |||
|description=CAGE_peak_12_at_SRSF5_5end | |||
|id=chr14:70237706..70237725,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.31e-18!140;CL:0002031!4.10e-16!124;CL:0002057!8.83e-16!42;CL:0002087!1.19e-15!119;CL:0000860!3.08e-15!45;CL:0000037!4.09e-15!172;CL:0000566!4.09e-15!172;CL:0002032!7.04e-15!165;CL:0000837!7.04e-15!165;CL:0000988!2.61e-13!182;CL:0000766!1.47e-12!76;CL:0000839!3.88e-10!70;CL:0002194!7.90e-10!63;CL:0000576!7.90e-10!63;CL:0000040!7.90e-10!63;CL:0000559!7.90e-10!63;CL:0000557!8.91e-10!71;CL:0002009!1.48e-09!65;CL:0000763!5.51e-09!112;CL:0000049!5.51e-09!112;CL:0000838!6.44e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000473;1.25e-14;39!CL:0000234;1.25e-14;39!CL:0000576;3.92e-12;48!CL:0000791;2.85e-11;18!CL:0000789;2.85e-11;18!CL:0002419;2.85e-11;18!CL:0000766;4.50e-09;69!CL:0000084;5.54e-08;25!CL:0002087;9.99e-08;104!CL:0000624;1.91e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.59e-23,42;CL:0002057,3.59e-23,42;CL:0000738,5.60e-23,136;CL:0000473,8.26e-22,48;CL:0000234,8.26e-22,48;CL:0002087,2.43e-21,115;CL:0002031,2.32e-20,120;CL:0000037,2.46e-18,168;CL:0002032,1.25e-17,161;CL:0000837,1.25e-17,161;CL:0000766,1.61e-17,72;CL:0000988,2.75e-16,177;CL:0002009,3.95e-15,61;CL:0002194,4.31e-15,59;CL:0000576,4.31e-15,59;CL:0000040,4.31e-15,59;CL:0000559,4.31e-15,59;CL:0000557,1.12e-14,67;CL:0000839,3.20e-14,66;CL:0000791,4.89e-12,18;CL:0000789,4.89e-12,18;CL:0002420,4.89e-12,18;CL:0002419,4.89e-12,18;CL:0000790,4.89e-12,18;CL:0000763,2.60e-11,108;CL:0000049,2.60e-11,108;CL:0000084,2.26e-08,25;CL:0000827,2.26e-08,25;CL:0000624,1.56e-07,6;CL:0000625,2.31e-07,11;CL:0000838,6.94e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-17;42!CL:0000790;2.85e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-10!102;UBERON:0003061!1.52e-10!102;UBERON:0002193!3.24e-09!112;UBERON:0002371!5.12e-09!80;UBERON:0001474!2.25e-08!86;UBERON:0004765!5.81e-07!101;UBERON:0001434!5.81e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-14,76;UBERON:0002390,8.21e-14,98;UBERON:0003061,8.21e-14,98;UBERON:0001474,2.19e-12,82;UBERON:0002193,4.81e-12,108;UBERON:0002405,3.81e-11,93;UBERON:0004765,7.57e-11,90;UBERON:0001434,7.18e-10,100 | |||
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| |||
|short_description=p12@SRSF5 | |||
}} |
Revision as of 05:21, 11 September 2013
Short description: | p12@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SRSF5_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000554929_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-14 | 76 |
hematopoietic system | 8.21e-14 | 98 |
blood island | 8.21e-14 | 98 |
bone element | 2.19e-12 | 82 |
hemolymphoid system | 4.81e-12 | 108 |
immune system | 3.81e-11 | 93 |
skeletal element | 7.57e-11 | 90 |
skeletal system | 7.18e-10 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.