FFCP PHASE1:Hg19::chr16:85590308..85590322,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr16:85590308..85590322,-|id=chr16:85590308..85590322,-|ontology_enrichment_celltype=CL:0000988!1.25e-20!182;CL:0002032!6.32e-19!165;CL:0000837!6.32e-19!165;CL:0000037!9.77e-19!172;CL:0000566!9.77e-19!172;CL:0000763!5.91e-18!112;CL:0000049!5.91e-18!112;CL:0000766!4.63e-16!76;CL:0000839!6.32e-14!70;CL:0000738!8.55e-14!140;CL:0002031!2.26e-13!124;CL:0002057!4.35e-12!42;CL:0000860!5.66e-12!45;CL:0000557!9.62e-12!71;CL:0002087!1.43e-11!119;CL:0002194!2.15e-10!63;CL:0000576!2.15e-10!63;CL:0000040!2.15e-10!63;CL:0000559!2.15e-10!63;CL:0002009!1.45e-09!65|ontology_enrichment_celltype_v019=CL:0000097;3.89e-14;5!CL:0000081;4.41e-12;11!CL:0000094;6.03e-09;8!CL:0000623;8.41e-09;3!CL:0000766;1.01e-07;69!CL:0000163;1.20e-07;9!CL:0000771;3.65e-07;2|ontology_enrichment_celltype_v019_2=CL:0000097,3.64e-14,5;CL:0002028,3.64e-14,5;CL:0000766,2.56e-13,72;CL:0000763,1.10e-12,108;CL:0000049,1.10e-12,108;CL:0000988,2.94e-12,177;CL:0000081,4.01e-12,11;CL:0002032,1.15e-10,161;CL:0000837,1.15e-10,161;CL:0000037,1.23e-10,168;CL:0000738,2.09e-09,136;CL:0000839,3.07e-09,66;CL:0000623,4.78e-09,3;CL:0000825,4.78e-09,3;CL:0000094,5.34e-09,8;CL:0000557,5.49e-08,67;CL:0000163,1.16e-07,9;CL:0000771,3.68e-07,2;CL:0002031,5.66e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;6.02e-07;4!DOID:1612;6.02e-07;4|ontology_enrichment_disease_v019_2=DOID:5093,6.63e-07,4;DOID:1612,6.63e-07,4|ontology_enrichment_uberon=UBERON:0002390!3.79e-18!102;UBERON:0003061!3.79e-18!102;UBERON:0002193!1.74e-14!112;UBERON:0002371!6.89e-12!80;UBERON:0001474!5.14e-11!86;UBERON:0004765!1.66e-08!101;UBERON:0001434!1.66e-08!101;UBERON:0000178!4.37e-08!15;UBERON:0000179!4.37e-08!15;UBERON:0000463!4.37e-08!15;UBERON:0002405!1.57e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-16;15!UBERON:0000179;2.84e-16;15!UBERON:0000463;2.84e-16;15!UBERON:0002390;1.08e-10;32!UBERON:0001044;1.52e-07;6!UBERON:0003293;1.52e-07;6!UBERON:0003294;1.52e-07;6!UBERON:0010047;1.52e-07;6!UBERON:0003408;1.52e-07;6!UBERON:0000167;1.52e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-17,98;UBERON:0003061,3.37e-17,98;UBERON:0000178,2.53e-16,15;UBERON:0000179,2.53e-16,15;UBERON:0000463,2.53e-16,15;UBERON:0002193,7.28e-15,108;UBERON:0003081,1.48e-08,203;UBERON:0002371,2.14e-08,76;UBERON:0001044,1.47e-07,6;UBERON:0003293,1.47e-07,6;UBERON:0003294,1.47e-07,6;UBERON:0010047,1.47e-07,6;UBERON:0000167,1.47e-07,6;UBERON:0001474,1.88e-07,82;UBERON:0002405,7.68e-07,93|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.492484232307152,0,0.940364164434263,0.286235987131057,0.547497700291537,0.251085279189606,0.534893840235659,0.164201178899891,0.393553906568396,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,1.66198622559563,0.802177789880567,0.868043482863407,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,3.39617685662943,0.464858073811369,0.822335776043652,1.23882548358041,0,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,1.50593871634084,0.545812300115692,3.14612878223118,0.306083892370903,0.320929027076094,1.91801137739712,0,0.398927315243264,0.852449501065388,1.45104619314292,0.56738522469114,1.24564449799115,0,0,0.434377689410233,0.605399502633369,0,1.89877432464531,0.633765858935825,0.212604299965044,0.628975936525128,0.336985893439485,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,0.526768169550154,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0.829050053357545,0.579606171470105,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0.95569624297229,0,1.90090408889675,0.602300476311091,0.383959833463255,0,0.473554504088034,0,0.80642697289893,1.06976078313403,1.01377082717959,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0.522389211897802,0.398873881556595,0.238490624305342,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,46.533631697799,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.515281080091258,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr16:85590308..85590322,- | |||
|id=chr16:85590308..85590322,- | |||
|ontology_enrichment_celltype=CL:0000988!1.25e-20!182;CL:0002032!6.32e-19!165;CL:0000837!6.32e-19!165;CL:0000037!9.77e-19!172;CL:0000566!9.77e-19!172;CL:0000763!5.91e-18!112;CL:0000049!5.91e-18!112;CL:0000766!4.63e-16!76;CL:0000839!6.32e-14!70;CL:0000738!8.55e-14!140;CL:0002031!2.26e-13!124;CL:0002057!4.35e-12!42;CL:0000860!5.66e-12!45;CL:0000557!9.62e-12!71;CL:0002087!1.43e-11!119;CL:0002194!2.15e-10!63;CL:0000576!2.15e-10!63;CL:0000040!2.15e-10!63;CL:0000559!2.15e-10!63;CL:0002009!1.45e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.89e-14;5!CL:0000081;4.41e-12;11!CL:0000094;6.03e-09;8!CL:0000623;8.41e-09;3!CL:0000766;1.01e-07;69!CL:0000163;1.20e-07;9!CL:0000771;3.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.64e-14,5;CL:0002028,3.64e-14,5;CL:0000766,2.56e-13,72;CL:0000763,1.10e-12,108;CL:0000049,1.10e-12,108;CL:0000988,2.94e-12,177;CL:0000081,4.01e-12,11;CL:0002032,1.15e-10,161;CL:0000837,1.15e-10,161;CL:0000037,1.23e-10,168;CL:0000738,2.09e-09,136;CL:0000839,3.07e-09,66;CL:0000623,4.78e-09,3;CL:0000825,4.78e-09,3;CL:0000094,5.34e-09,8;CL:0000557,5.49e-08,67;CL:0000163,1.16e-07,9;CL:0000771,3.68e-07,2;CL:0002031,5.66e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.02e-07;4!DOID:1612;6.02e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.63e-07,4;DOID:1612,6.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-18!102;UBERON:0003061!3.79e-18!102;UBERON:0002193!1.74e-14!112;UBERON:0002371!6.89e-12!80;UBERON:0001474!5.14e-11!86;UBERON:0004765!1.66e-08!101;UBERON:0001434!1.66e-08!101;UBERON:0000178!4.37e-08!15;UBERON:0000179!4.37e-08!15;UBERON:0000463!4.37e-08!15;UBERON:0002405!1.57e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-16;15!UBERON:0000179;2.84e-16;15!UBERON:0000463;2.84e-16;15!UBERON:0002390;1.08e-10;32!UBERON:0001044;1.52e-07;6!UBERON:0003293;1.52e-07;6!UBERON:0003294;1.52e-07;6!UBERON:0010047;1.52e-07;6!UBERON:0003408;1.52e-07;6!UBERON:0000167;1.52e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-17,98;UBERON:0003061,3.37e-17,98;UBERON:0000178,2.53e-16,15;UBERON:0000179,2.53e-16,15;UBERON:0000463,2.53e-16,15;UBERON:0002193,7.28e-15,108;UBERON:0003081,1.48e-08,203;UBERON:0002371,2.14e-08,76;UBERON:0001044,1.47e-07,6;UBERON:0003293,1.47e-07,6;UBERON:0003294,1.47e-07,6;UBERON:0010047,1.47e-07,6;UBERON:0000167,1.47e-07,6;UBERON:0001474,1.88e-07,82;UBERON:0002405,7.68e-07,93 | |||
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| |||
|short_description=p@chr16:85590308..85590322,- | |||
}} |
Revision as of 11:52, 11 September 2013
Short description: | p@chr16:85590308..85590322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:85590308..85590322, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.64e-14 | 5 |
basophil mast progenitor cell | 3.64e-14 | 5 |
myeloid leukocyte | 2.56e-13 | 72 |
myeloid cell | 1.10e-12 | 108 |
common myeloid progenitor | 1.10e-12 | 108 |
hematopoietic cell | 2.94e-12 | 177 |
blood cell | 4.01e-12 | 11 |
hematopoietic oligopotent progenitor cell | 1.15e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-10 | 161 |
hematopoietic stem cell | 1.23e-10 | 168 |
leukocyte | 2.09e-09 | 136 |
myeloid lineage restricted progenitor cell | 3.07e-09 | 66 |
natural killer cell | 4.78e-09 | 3 |
pro-NK cell | 4.78e-09 | 3 |
granulocyte | 5.34e-09 | 8 |
granulocyte monocyte progenitor cell | 5.49e-08 | 67 |
endocrine cell | 1.16e-07 | 9 |
eosinophil | 3.68e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 5.66e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.37e-17 | 98 |
blood island | 3.37e-17 | 98 |
blood | 2.53e-16 | 15 |
haemolymphatic fluid | 2.53e-16 | 15 |
organism substance | 2.53e-16 | 15 |
hemolymphoid system | 7.28e-15 | 108 |
lateral plate mesoderm | 1.48e-08 | 203 |
bone marrow | 2.14e-08 | 76 |
saliva-secreting gland | 1.47e-07 | 6 |
gland of oral region | 1.47e-07 | 6 |
gland of foregut | 1.47e-07 | 6 |
oral gland | 1.47e-07 | 6 |
oral cavity | 1.47e-07 | 6 |
bone element | 1.88e-07 | 82 |
immune system | 7.68e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.63e-07 | 4 |
breast cancer | 6.63e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.