FFCP PHASE1:Hg19::chr17:56401766..56401777,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:56401766..56401777,-|id=chr17:56401766..56401777,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;1.43e-07;1!CL:0000228;1.43e-07;1!CL:0000557;1.43e-07;1!CL:0002372;1.43e-07;1|ontology_enrichment_celltype_v019_2=CL:0000228,1.30e-07,1;CL:0002372,1.30e-07,1|ontology_enrichment_development_v019=UBERON:0007297;1.84e-13;2!UBERON:0003056;2.86e-09;3!UBERON:0006242;1.43e-07;1!UBERON:0005754;1.43e-07;1!UBERON:0005425;1.43e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;6.04e-14;2!DOID:5662;1.43e-07;1|ontology_enrichment_disease_v019_2=DOID:3307,3.74e-14,2;DOID:5662,1.58e-07,1|ontology_enrichment_uberon=UBERON:0007023!6.58e-30!115;UBERON:0003075!3.61e-16!86;UBERON:0007284!3.61e-16!86;UBERON:0001049!6.39e-16!57;UBERON:0005068!6.39e-16!57;UBERON:0006241!6.39e-16!57;UBERON:0007135!6.39e-16!57;UBERON:0005743!8.53e-16!86;UBERON:0000073!9.60e-16!94;UBERON:0001016!9.60e-16!94;UBERON:0002346!1.18e-15!90;UBERON:0001017!3.87e-15!82;UBERON:0000955!3.17e-13!69;UBERON:0006238!3.17e-13!69;UBERON:0002616!7.16e-12!59;UBERON:0004121!1.09e-10!169;UBERON:0003076!1.27e-10!15;UBERON:0003057!1.27e-10!15;UBERON:0000924!1.46e-10!173;UBERON:0006601!1.46e-10!173;UBERON:0004732!3.01e-09!13;UBERON:0000153!4.23e-09!129;UBERON:0007811!4.23e-09!129;UBERON:0002780!1.44e-08!41;UBERON:0001890!1.44e-08!41;UBERON:0006240!1.44e-08!41;UBERON:0000033!2.47e-08!123;UBERON:0003080!3.20e-08!42;UBERON:0004733!4.02e-08!12;UBERON:0002028!4.02e-08!12;UBERON:0007277!4.02e-08!12;UBERON:0003056!1.08e-07!61;UBERON:0000475!1.64e-07!365|ontology_enrichment_uberon_v019=UBERON:0000007;1.84e-13;2!UBERON:0006947;2.86e-09;3!UBERON:0004054;2.86e-09;3!UBERON:0005795;5.38e-08;1!UBERON:0006834;1.43e-07;1!UBERON:0000998;1.43e-07;1!UBERON:0002146;1.43e-07;1!UBERON:0000941;1.43e-07;1!UBERON:0001301;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0006868;1.43e-07;1!UBERON:0001021;1.43e-07;1!UBERON:0005623;1.43e-07;1!UBERON:0004175;3.07e-07;21!UBERON:0003296;3.70e-07;4!UBERON:0010133;3.70e-07;4!UBERON:0005904;3.70e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.48e-13,2;UBERON:0006947,5.80e-09,3;UBERON:0004054,5.80e-09,3;UBERON:0002146,8.28e-08,1;UBERON:0005623,8.28e-08,1;UBERON:0000941,1.22e-07,1;UBERON:0001785,1.22e-07,1;UBERON:0002464,1.22e-07,1;UBERON:0004904,1.22e-07,1;UBERON:0001021,1.22e-07,1;UBERON:0003902,1.22e-07,1;UBERON:0005425,1.22e-07,1;UBERON:0000998,2.04e-07,1;UBERON:0006868,2.04e-07,1;UBERON:0006834,2.17e-07,1;UBERON:0001301,2.98e-07,1;UBERON:0003296,5.06e-07,4;UBERON:0010133,5.06e-07,4;UBERON:0005904,6.27e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0.675105328965065,0.194874010322397,0.757301322732344,0,0,1.42003837006646,0.302256294682921,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,1.10621501125022,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0,0,1.90012867315194,1.19548792950642,0.828851746593443,1.0077309914171,0.102268682502155,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0.885741385813839,0.482385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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:56401766..56401777,- | |||
|id=chr17:56401766..56401777,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.43e-07;1!CL:0000228;1.43e-07;1!CL:0000557;1.43e-07;1!CL:0002372;1.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.30e-07,1;CL:0002372,1.30e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.84e-13;2!UBERON:0003056;2.86e-09;3!UBERON:0006242;1.43e-07;1!UBERON:0005754;1.43e-07;1!UBERON:0005425;1.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;6.04e-14;2!DOID:5662;1.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.74e-14,2;DOID:5662,1.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.58e-30!115;UBERON:0003075!3.61e-16!86;UBERON:0007284!3.61e-16!86;UBERON:0001049!6.39e-16!57;UBERON:0005068!6.39e-16!57;UBERON:0006241!6.39e-16!57;UBERON:0007135!6.39e-16!57;UBERON:0005743!8.53e-16!86;UBERON:0000073!9.60e-16!94;UBERON:0001016!9.60e-16!94;UBERON:0002346!1.18e-15!90;UBERON:0001017!3.87e-15!82;UBERON:0000955!3.17e-13!69;UBERON:0006238!3.17e-13!69;UBERON:0002616!7.16e-12!59;UBERON:0004121!1.09e-10!169;UBERON:0003076!1.27e-10!15;UBERON:0003057!1.27e-10!15;UBERON:0000924!1.46e-10!173;UBERON:0006601!1.46e-10!173;UBERON:0004732!3.01e-09!13;UBERON:0000153!4.23e-09!129;UBERON:0007811!4.23e-09!129;UBERON:0002780!1.44e-08!41;UBERON:0001890!1.44e-08!41;UBERON:0006240!1.44e-08!41;UBERON:0000033!2.47e-08!123;UBERON:0003080!3.20e-08!42;UBERON:0004733!4.02e-08!12;UBERON:0002028!4.02e-08!12;UBERON:0007277!4.02e-08!12;UBERON:0003056!1.08e-07!61;UBERON:0000475!1.64e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.84e-13;2!UBERON:0006947;2.86e-09;3!UBERON:0004054;2.86e-09;3!UBERON:0005795;5.38e-08;1!UBERON:0006834;1.43e-07;1!UBERON:0000998;1.43e-07;1!UBERON:0002146;1.43e-07;1!UBERON:0000941;1.43e-07;1!UBERON:0001301;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0006868;1.43e-07;1!UBERON:0001021;1.43e-07;1!UBERON:0005623;1.43e-07;1!UBERON:0004175;3.07e-07;21!UBERON:0003296;3.70e-07;4!UBERON:0010133;3.70e-07;4!UBERON:0005904;3.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.48e-13,2;UBERON:0006947,5.80e-09,3;UBERON:0004054,5.80e-09,3;UBERON:0002146,8.28e-08,1;UBERON:0005623,8.28e-08,1;UBERON:0000941,1.22e-07,1;UBERON:0001785,1.22e-07,1;UBERON:0002464,1.22e-07,1;UBERON:0004904,1.22e-07,1;UBERON:0001021,1.22e-07,1;UBERON:0003902,1.22e-07,1;UBERON:0005425,1.22e-07,1;UBERON:0000998,2.04e-07,1;UBERON:0006868,2.04e-07,1;UBERON:0006834,2.17e-07,1;UBERON:0001301,2.98e-07,1;UBERON:0003296,5.06e-07,4;UBERON:0010133,5.06e-07,4;UBERON:0005904,6.27e-07,4 | |||
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|short_description=p@chr17:56401766..56401777,- | |||
}} |
Revision as of 14:46, 11 September 2013
Short description: | p@chr17:56401766..56401777, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:56401766..56401777, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.30e-07 | 1 |
myotube | 1.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.48e-13 | 2 |
male genital duct | 5.80e-09 | 3 |
internal male genitalia | 5.80e-09 | 3 |
pulmonary valve | 8.28e-08 | 1 |
semi-lunar valve | 8.28e-08 | 1 |
cranial nerve II | 1.22e-07 | 1 |
cranial nerve | 1.22e-07 | 1 |
nerve trunk | 1.22e-07 | 1 |
nerve connecting eye with brain | 1.22e-07 | 1 |
nerve | 1.22e-07 | 1 |
retinal neural layer | 1.22e-07 | 1 |
presumptive neural retina | 1.22e-07 | 1 |
seminal vesicle | 2.04e-07 | 1 |
seminal fluid secreting gland | 2.04e-07 | 1 |
uterus or analog | 2.17e-07 | 1 |
epididymis | 2.98e-07 | 1 |
gland of diencephalon | 5.06e-07 | 4 |
neuroendocrine gland | 5.06e-07 | 4 |
duct of male reproductive system | 6.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.74e-14 | 2 |
pleomorphic carcinoma | 1.58e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.