FFCP PHASE1:Hg19::chr17:76628125..76628162,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:76628125..76628162,-|id=chr17:76628125..76628162,-|ontology_enrichment_celltype=CL:0002087!8.25e-46!119;CL:0002032!1.16e-43!165;CL:0000837!1.16e-43!165;CL:0000037!3.06e-43!172;CL:0000566!3.06e-43!172;CL:0000738!2.73e-42!140;CL:0002031!1.56e-39!124;CL:0000988!2.91e-38!182;CL:0000860!8.62e-27!45;CL:0002057!3.66e-24!42;CL:0002194!1.11e-23!63;CL:0000576!1.11e-23!63;CL:0000040!1.11e-23!63;CL:0000559!1.11e-23!63;CL:0002009!2.42e-23!65;CL:0000763!5.13e-23!112;CL:0000049!5.13e-23!112;CL:0000766!5.73e-22!76;CL:0000557!1.44e-20!71;CL:0000839!3.20e-20!70;CL:0000542!2.25e-19!53;CL:0000051!2.25e-19!53;CL:0000838!7.74e-19!52;CL:0000084!1.99e-13!25;CL:0000827!1.99e-13!25;CL:0000791!8.46e-11!18;CL:0000789!8.46e-11!18;CL:0002420!8.46e-11!18;CL:0002419!8.46e-11!18;CL:0000790!8.46e-11!18;CL:0000625!4.38e-08!11;CL:0000134!7.23e-07!358|ontology_enrichment_celltype_v019=CL:0000860;1.06e-31;33!CL:0002057;1.06e-31;33!CL:0000473;5.84e-22;39!CL:0000234;5.84e-22;39!CL:0000576;2.59e-15;48!CL:0002087;1.17e-14;104!CL:0000084;2.83e-12;25!CL:0000542;7.39e-11;53!CL:0000625;1.24e-10;11!CL:0000766;8.75e-10;69!CL:0000738;2.92e-09;136!CL:0000791;1.47e-08;18!CL:0000789;1.47e-08;18!CL:0002419;1.47e-08;18!CL:0000988;4.05e-07;177|ontology_enrichment_celltype_v019_2=CL:0002087,2.22e-42,115;CL:0002031,1.21e-35,120;CL:0000738,2.79e-35,136;CL:0002032,2.15e-33,161;CL:0000837,2.15e-33,161;CL:0000037,2.70e-33,168;CL:0000988,1.93e-30,177;CL:0000860,1.93e-26,42;CL:0002057,1.93e-26,42;CL:0000473,2.40e-23,48;CL:0000234,2.40e-23,48;CL:0002194,9.39e-21,59;CL:0000576,9.39e-21,59;CL:0000040,9.39e-21,59;CL:0000559,9.39e-21,59;CL:0002009,9.79e-20,61;CL:0000542,1.35e-19,53;CL:0000051,1.35e-19,53;CL:0000838,8.65e-19,52;CL:0000766,1.55e-17,72;CL:0000839,1.81e-17,66;CL:0000557,4.66e-17,67;CL:0000763,1.25e-14,108;CL:0000049,1.25e-14,108;CL:0000084,2.46e-12,25;CL:0000827,2.46e-12,25;CL:0000625,9.58e-11,11;CL:0000791,1.20e-08,18;CL:0000789,1.20e-08,18;CL:0002420,1.20e-08,18;CL:0002419,1.20e-08,18;CL:0000790,1.20e-08,18;CL:0000134,8.16e-08,354;CL:0002320,2.66e-07,361|ontology_enrichment_development_v019=CL:0002057;7.51e-20;42!CL:0000051;7.39e-11;53!CL:0000790;1.47e-08;18|ontology_enrichment_disease=DOID:1749!4.05e-11!14;DOID:162!1.31e-08!235;DOID:2531!2.42e-08!51;DOID:0060083!2.42e-08!51;DOID:305!2.72e-08!106;DOID:14566!6.86e-08!239;DOID:1240!1.12e-07!39|ontology_enrichment_disease_v019=DOID:1749;2.08e-18;14|ontology_enrichment_disease_v019_2=DOID:1749,1.69e-18,14;DOID:305,3.37e-08,106;DOID:162,1.85e-07,235;DOID:2531,2.41e-07,51;DOID:0060083,2.41e-07,51;DOID:14566,5.12e-07,239|ontology_enrichment_uberon=UBERON:0002390!4.73e-22!102;UBERON:0003061!4.73e-22!102;UBERON:0002193!2.07e-19!112;UBERON:0001474!3.95e-16!86;UBERON:0002371!5.14e-16!80;UBERON:0002405!2.11e-12!115;UBERON:0004765!6.57e-11!101;UBERON:0001434!6.57e-11!101|ontology_enrichment_uberon_v019=UBERON:0003343;2.81e-07;4!UBERON:0004785;2.81e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.67e-17,98;UBERON:0003061,1.67e-17,98;UBERON:0002193,1.03e-14,108;UBERON:0001474,4.80e-14,82;UBERON:0002371,7.23e-14,76;UBERON:0004765,6.67e-12,90;UBERON:0002405,1.68e-11,93;UBERON:0001434,9.53e-10,100;UBERON:0003343,2.00e-07,4;UBERON:0004785,2.00e-07,4;UBERON:0002384,4.78e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.29881650459848,1.81034797021462,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0.369754010166788,0.0774672005803016,0,0,0,3.00816671205213,0.217010870715852,0.895661896959697,0.32389366601898,0.515151135268373,2.18097358169347,3.40088349319928,1.94067248950253,5.34586784883075,5.75635043230556,3.71647645074124,2.01384674625505,5.12321413058201,1.6553756092201,3.10271112662957,7.10033151942209,4.06279459783025,4.51781614902251,7.64137220161968,2.69668181334102,8.26426509401437,8.34415470397843,6.39337125799041,0.659702600373432,3.19141852194611,1.27867425159808,5.80418477257168,10.7803192691317,4.9825779919646,2.76373531782418,2.08593167368081,3.25783267057675,2.42159801053347,3.68277635987565,6.32924774881769,0.211255286311942,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0.570025487482497,0.59675003159727,0.365328307529268,3.51992488922645,1.09227722252426,2.66852776159066,1.28019066769952,0.800791974072025,1.14950487990897,1.98313461835459,0.954053754535364,0.569212969109448,1.17447437874188,0.382273228125229,0,0.560508562981536,0,1.57367816091066,0.393010762749165,0.411202997999018,1.00311897234407,0.32592226663359,0.473447805734733,3.89653456815823,1.00269411196656,0.589211814949674,1.55073726208535,0.541607727530031,1.0247305578054,1.1705341280389,0.657751618414705,1.93445012450094,0,0,0,1.04535523804977,0.906474741580529,0.383220493601921,1.71813722741315,0.506039384039006,1.91139248594458,1.30216690771284,0.950452044448374,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:76628125..76628162,- | |||
|id=chr17:76628125..76628162,- | |||
|ontology_enrichment_celltype=CL:0002087!8.25e-46!119;CL:0002032!1.16e-43!165;CL:0000837!1.16e-43!165;CL:0000037!3.06e-43!172;CL:0000566!3.06e-43!172;CL:0000738!2.73e-42!140;CL:0002031!1.56e-39!124;CL:0000988!2.91e-38!182;CL:0000860!8.62e-27!45;CL:0002057!3.66e-24!42;CL:0002194!1.11e-23!63;CL:0000576!1.11e-23!63;CL:0000040!1.11e-23!63;CL:0000559!1.11e-23!63;CL:0002009!2.42e-23!65;CL:0000763!5.13e-23!112;CL:0000049!5.13e-23!112;CL:0000766!5.73e-22!76;CL:0000557!1.44e-20!71;CL:0000839!3.20e-20!70;CL:0000542!2.25e-19!53;CL:0000051!2.25e-19!53;CL:0000838!7.74e-19!52;CL:0000084!1.99e-13!25;CL:0000827!1.99e-13!25;CL:0000791!8.46e-11!18;CL:0000789!8.46e-11!18;CL:0002420!8.46e-11!18;CL:0002419!8.46e-11!18;CL:0000790!8.46e-11!18;CL:0000625!4.38e-08!11;CL:0000134!7.23e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-31;33!CL:0002057;1.06e-31;33!CL:0000473;5.84e-22;39!CL:0000234;5.84e-22;39!CL:0000576;2.59e-15;48!CL:0002087;1.17e-14;104!CL:0000084;2.83e-12;25!CL:0000542;7.39e-11;53!CL:0000625;1.24e-10;11!CL:0000766;8.75e-10;69!CL:0000738;2.92e-09;136!CL:0000791;1.47e-08;18!CL:0000789;1.47e-08;18!CL:0002419;1.47e-08;18!CL:0000988;4.05e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.22e-42,115;CL:0002031,1.21e-35,120;CL:0000738,2.79e-35,136;CL:0002032,2.15e-33,161;CL:0000837,2.15e-33,161;CL:0000037,2.70e-33,168;CL:0000988,1.93e-30,177;CL:0000860,1.93e-26,42;CL:0002057,1.93e-26,42;CL:0000473,2.40e-23,48;CL:0000234,2.40e-23,48;CL:0002194,9.39e-21,59;CL:0000576,9.39e-21,59;CL:0000040,9.39e-21,59;CL:0000559,9.39e-21,59;CL:0002009,9.79e-20,61;CL:0000542,1.35e-19,53;CL:0000051,1.35e-19,53;CL:0000838,8.65e-19,52;CL:0000766,1.55e-17,72;CL:0000839,1.81e-17,66;CL:0000557,4.66e-17,67;CL:0000763,1.25e-14,108;CL:0000049,1.25e-14,108;CL:0000084,2.46e-12,25;CL:0000827,2.46e-12,25;CL:0000625,9.58e-11,11;CL:0000791,1.20e-08,18;CL:0000789,1.20e-08,18;CL:0002420,1.20e-08,18;CL:0002419,1.20e-08,18;CL:0000790,1.20e-08,18;CL:0000134,8.16e-08,354;CL:0002320,2.66e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.51e-20;42!CL:0000051;7.39e-11;53!CL:0000790;1.47e-08;18 | |||
|ontology_enrichment_disease=DOID:1749!4.05e-11!14;DOID:162!1.31e-08!235;DOID:2531!2.42e-08!51;DOID:0060083!2.42e-08!51;DOID:305!2.72e-08!106;DOID:14566!6.86e-08!239;DOID:1240!1.12e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.08e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.69e-18,14;DOID:305,3.37e-08,106;DOID:162,1.85e-07,235;DOID:2531,2.41e-07,51;DOID:0060083,2.41e-07,51;DOID:14566,5.12e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.73e-22!102;UBERON:0003061!4.73e-22!102;UBERON:0002193!2.07e-19!112;UBERON:0001474!3.95e-16!86;UBERON:0002371!5.14e-16!80;UBERON:0002405!2.11e-12!115;UBERON:0004765!6.57e-11!101;UBERON:0001434!6.57e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.81e-07;4!UBERON:0004785;2.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.67e-17,98;UBERON:0003061,1.67e-17,98;UBERON:0002193,1.03e-14,108;UBERON:0001474,4.80e-14,82;UBERON:0002371,7.23e-14,76;UBERON:0004765,6.67e-12,90;UBERON:0002405,1.68e-11,93;UBERON:0001434,9.53e-10,100;UBERON:0003343,2.00e-07,4;UBERON:0004785,2.00e-07,4;UBERON:0002384,4.78e-07,371 | |||
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| |||
|short_description=p@chr17:76628125..76628162,- | |||
}} |
Revision as of 16:07, 11 September 2013
Short description: | p@chr17:76628125..76628162, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76628125..76628162, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.67e-17 | 98 |
blood island | 1.67e-17 | 98 |
hemolymphoid system | 1.03e-14 | 108 |
bone element | 4.80e-14 | 82 |
bone marrow | 7.23e-14 | 76 |
skeletal element | 6.67e-12 | 90 |
immune system | 1.68e-11 | 93 |
skeletal system | 9.53e-10 | 100 |
mucosa of oral region | 2.00e-07 | 4 |
respiratory system mucosa | 2.00e-07 | 4 |
connective tissue | 4.78e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.69e-18 | 14 |
carcinoma | 3.37e-08 | 106 |
cancer | 1.85e-07 | 235 |
hematologic cancer | 2.41e-07 | 51 |
immune system cancer | 2.41e-07 | 51 |
disease of cellular proliferation | 5.12e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.