FFCP PHASE1:Hg19::chr19:54327542..54327591,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=91662|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22938|TSSclassifier=N|UniProt=A8MTQ2|association_with_transcript=0bp_to_ENST00000391775_5end|coexpression_cluster_id=C1003|description=CAGE_peak_1_at_NLRP12_5end|id=chr19:54327542..54327591,-|ontology_enrichment_celltype=CL:0000763!7.82e-56!112;CL:0000049!7.82e-56!112;CL:0000766!8.24e-53!76;CL:0000037!2.66e-48!172;CL:0000566!2.66e-48!172;CL:0002032!1.99e-46!165;CL:0000837!1.99e-46!165;CL:0002057!3.41e-46!42;CL:0000839!9.31e-46!70;CL:0002194!1.03e-44!63;CL:0000576!1.03e-44!63;CL:0000040!1.03e-44!63;CL:0000559!1.03e-44!63;CL:0000988!1.42e-43!182;CL:0000557!4.89e-43!71;CL:0002009!1.14e-42!65;CL:0000860!7.04e-42!45;CL:0000738!6.19e-39!140;CL:0002087!3.59e-34!119;CL:0002031!4.47e-33!124;CL:0002393!5.43e-10!9;CL:0002397!5.43e-10!9;CL:0000094!6.72e-10!8;CL:0000134!8.37e-09!358;CL:0002320!4.15e-08!365|ontology_enrichment_celltype_v019=CL:0000860;1.10e-54;33!CL:0002057;1.10e-54;33!CL:0000576;9.68e-50;48!CL:0000473;2.01e-47;39!CL:0000234;2.01e-47;39!CL:0000766;3.04e-36;69!CL:0000763;3.35e-25;100!CL:0002087;5.44e-17;104!CL:0000094;4.19e-15;8!CL:0000738;2.91e-12;136!CL:0000988;1.80e-11;177!CL:0002393;7.45e-11;6!CL:0002397;7.45e-11;6!CL:0000081;1.70e-10;11!CL:0000775;2.72e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,2.38e-81,72;CL:0000763,1.44e-76,108;CL:0000049,1.44e-76,108;CL:0000473,2.06e-76,48;CL:0000234,2.06e-76,48;CL:0000860,1.86e-74,42;CL:0002057,1.86e-74,42;CL:0002194,2.59e-74,59;CL:0000576,2.59e-74,59;CL:0000040,2.59e-74,59;CL:0000559,2.59e-74,59;CL:0002009,2.30e-71,61;CL:0000839,7.36e-70,66;CL:0000557,5.10e-66,67;CL:0000037,9.04e-64,168;CL:0002032,3.31e-60,161;CL:0000837,3.31e-60,161;CL:0000988,2.55e-59,177;CL:0000738,7.91e-57,136;CL:0002087,1.86e-51,115;CL:0002031,2.84e-46,120;CL:0000134,5.72e-18,354;CL:0002320,3.50e-17,361;CL:0002393,2.86e-15,9;CL:0002397,2.86e-15,9;CL:0000094,4.05e-15,8;CL:0000219,1.98e-14,386;CL:0000048,4.07e-11,427;CL:0000723,1.15e-10,433;CL:0000034,1.41e-10,441;CL:0000081,1.66e-10,11;CL:0000775,2.75e-07,3|ontology_enrichment_development_v019=CL:0002057;3.15e-53;42!CL:0000049;4.98e-22;108|ontology_enrichment_disease=DOID:8692!1.29e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.51e-48!102;UBERON:0003061!6.51e-48!102;UBERON:0002193!1.15e-43!112;UBERON:0002371!3.19e-37!80;UBERON:0001474!4.16e-34!86;UBERON:0002405!8.47e-29!115;UBERON:0004765!1.18e-26!101;UBERON:0001434!1.18e-26!101;UBERON:0003081!1.20e-14!216;UBERON:0007023!2.00e-14!115;UBERON:0002204!2.09e-13!167;UBERON:0000178!9.92e-11!15;UBERON:0000179!9.92e-11!15;UBERON:0000463!9.92e-11!15;UBERON:0002384!1.62e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-17;15!UBERON:0000179;2.11e-17;15!UBERON:0000463;2.11e-17;15!UBERON:0002390;5.14e-11;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.55e-74,98;UBERON:0003061,6.55e-74,98;UBERON:0002193,2.06e-67,108;UBERON:0002371,1.25e-58,76;UBERON:0001474,3.88e-53,82;UBERON:0002405,9.10e-51,93;UBERON:0004765,5.93e-47,90;UBERON:0001434,1.28e-40,100;UBERON:0003081,2.19e-25,203;UBERON:0002204,9.49e-20,167;UBERON:0000178,2.12e-17,15;UBERON:0000179,2.12e-17,15;UBERON:0000463,2.12e-17,15;UBERON:0002384,4.11e-16,371;UBERON:0000926,2.57e-13,315;UBERON:0004120,2.57e-13,315;UBERON:0006603,2.57e-13,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.454942396143,9.97956435052753,15.4816123316076,0,0,0,0,0,0,17.7278530730201,22.661522564126,19.096956622995,4.70222495903841,2.26725566213286,2.83333124397605,191.780276950246,128.855696797884,133.178649592111,105.290353718275,58.7970079871211,54.1986149066431,36.249241432591,41.4980344577143,20.3374717704183,50.3328693875463,42.6019891165325,55.5248595036801,116.33376583733,67.6807252143458,42.9221855290112,71.9297147071621,63.8648763881426,34.5242047931482,56.7344236321152,52.8578692697324,38.7864522984752,45.2726412260591,24.397564661719,26.1585344578141,45.4760084114705,32.8534238604727,23.4563952281526,46.010362200136,31.6718766949306,28.4816148696796,18.167954622827,12.1184450980075,12.3698600849942,90.0875621794891,58.1184575296629,62.20080205177,14.8206626745449,7.55883373356542,8.03722276564389,0,2.18455444504853,0,4.26730222566507,0.800791974072025,0,1.32208974556972,0.954053754535364,0,1.76171156811282,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0,3.16207750063323,1.4078527226986,4.99722906209383,4.97232229292435,0.821127996921047,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0.132957960518865,1.19245312152671,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,34.9002237733493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0.98282721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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=91662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22938 | |||
|TSSclassifier=N | |||
|UniProt=A8MTQ2 | |||
|association_with_transcript=0bp_to_ENST00000391775_5end | |||
|coexpression_cluster_id=C1003 | |||
|description=CAGE_peak_1_at_NLRP12_5end | |||
|id=chr19:54327542..54327591,- | |||
|ontology_enrichment_celltype=CL:0000763!7.82e-56!112;CL:0000049!7.82e-56!112;CL:0000766!8.24e-53!76;CL:0000037!2.66e-48!172;CL:0000566!2.66e-48!172;CL:0002032!1.99e-46!165;CL:0000837!1.99e-46!165;CL:0002057!3.41e-46!42;CL:0000839!9.31e-46!70;CL:0002194!1.03e-44!63;CL:0000576!1.03e-44!63;CL:0000040!1.03e-44!63;CL:0000559!1.03e-44!63;CL:0000988!1.42e-43!182;CL:0000557!4.89e-43!71;CL:0002009!1.14e-42!65;CL:0000860!7.04e-42!45;CL:0000738!6.19e-39!140;CL:0002087!3.59e-34!119;CL:0002031!4.47e-33!124;CL:0002393!5.43e-10!9;CL:0002397!5.43e-10!9;CL:0000094!6.72e-10!8;CL:0000134!8.37e-09!358;CL:0002320!4.15e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-54;33!CL:0002057;1.10e-54;33!CL:0000576;9.68e-50;48!CL:0000473;2.01e-47;39!CL:0000234;2.01e-47;39!CL:0000766;3.04e-36;69!CL:0000763;3.35e-25;100!CL:0002087;5.44e-17;104!CL:0000094;4.19e-15;8!CL:0000738;2.91e-12;136!CL:0000988;1.80e-11;177!CL:0002393;7.45e-11;6!CL:0002397;7.45e-11;6!CL:0000081;1.70e-10;11!CL:0000775;2.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.38e-81,72;CL:0000763,1.44e-76,108;CL:0000049,1.44e-76,108;CL:0000473,2.06e-76,48;CL:0000234,2.06e-76,48;CL:0000860,1.86e-74,42;CL:0002057,1.86e-74,42;CL:0002194,2.59e-74,59;CL:0000576,2.59e-74,59;CL:0000040,2.59e-74,59;CL:0000559,2.59e-74,59;CL:0002009,2.30e-71,61;CL:0000839,7.36e-70,66;CL:0000557,5.10e-66,67;CL:0000037,9.04e-64,168;CL:0002032,3.31e-60,161;CL:0000837,3.31e-60,161;CL:0000988,2.55e-59,177;CL:0000738,7.91e-57,136;CL:0002087,1.86e-51,115;CL:0002031,2.84e-46,120;CL:0000134,5.72e-18,354;CL:0002320,3.50e-17,361;CL:0002393,2.86e-15,9;CL:0002397,2.86e-15,9;CL:0000094,4.05e-15,8;CL:0000219,1.98e-14,386;CL:0000048,4.07e-11,427;CL:0000723,1.15e-10,433;CL:0000034,1.41e-10,441;CL:0000081,1.66e-10,11;CL:0000775,2.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.15e-53;42!CL:0000049;4.98e-22;108 | |||
|ontology_enrichment_disease=DOID:8692!1.29e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.51e-48!102;UBERON:0003061!6.51e-48!102;UBERON:0002193!1.15e-43!112;UBERON:0002371!3.19e-37!80;UBERON:0001474!4.16e-34!86;UBERON:0002405!8.47e-29!115;UBERON:0004765!1.18e-26!101;UBERON:0001434!1.18e-26!101;UBERON:0003081!1.20e-14!216;UBERON:0007023!2.00e-14!115;UBERON:0002204!2.09e-13!167;UBERON:0000178!9.92e-11!15;UBERON:0000179!9.92e-11!15;UBERON:0000463!9.92e-11!15;UBERON:0002384!1.62e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-17;15!UBERON:0000179;2.11e-17;15!UBERON:0000463;2.11e-17;15!UBERON:0002390;5.14e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.55e-74,98;UBERON:0003061,6.55e-74,98;UBERON:0002193,2.06e-67,108;UBERON:0002371,1.25e-58,76;UBERON:0001474,3.88e-53,82;UBERON:0002405,9.10e-51,93;UBERON:0004765,5.93e-47,90;UBERON:0001434,1.28e-40,100;UBERON:0003081,2.19e-25,203;UBERON:0002204,9.49e-20,167;UBERON:0000178,2.12e-17,15;UBERON:0000179,2.12e-17,15;UBERON:0000463,2.12e-17,15;UBERON:0002384,4.11e-16,371;UBERON:0000926,2.57e-13,315;UBERON:0004120,2.57e-13,315;UBERON:0006603,2.57e-13,315 | |||
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| |||
|short_description=p1@NLRP12 | |||
}} |
Revision as of 22:14, 11 September 2013
Short description: | p1@NLRP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NLRP12_5end |
Coexpression cluster: | C1003_CD14_Whole_Neutrophils_Macrophage_Eosinophils_blood_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000391775_5end |
EntrezGene: | NLRP12 |
HGNC: | 22938 |
UniProt: | A8MTQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.55e-74 | 98 |
blood island | 6.55e-74 | 98 |
hemolymphoid system | 2.06e-67 | 108 |
bone marrow | 1.25e-58 | 76 |
bone element | 3.88e-53 | 82 |
immune system | 9.10e-51 | 93 |
skeletal element | 5.93e-47 | 90 |
skeletal system | 1.28e-40 | 100 |
lateral plate mesoderm | 2.19e-25 | 203 |
musculoskeletal system | 9.49e-20 | 167 |
blood | 2.12e-17 | 15 |
haemolymphatic fluid | 2.12e-17 | 15 |
organism substance | 2.12e-17 | 15 |
connective tissue | 4.11e-16 | 371 |
mesoderm | 2.57e-13 | 315 |
mesoderm-derived structure | 2.57e-13 | 315 |
presumptive mesoderm | 2.57e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.