FFCP PHASE1:Hg19::chr1:155108603..155108650,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1342|description=CAGE_peak_at_chr1:155108603..155108650,-|id=chr1:155108603..155108650,-|ontology_enrichment_celltype=CL:0000988!6.20e-34!182;CL:0000738!3.05e-33!140;CL:0000037!2.44e-32!172;CL:0000566!2.44e-32!172;CL:0002032!9.82e-31!165;CL:0000837!9.82e-31!165;CL:0002057!1.81e-29!42;CL:0000766!1.01e-28!76;CL:0000860!2.23e-28!45;CL:0002031!6.98e-27!124;CL:0002087!5.31e-25!119;CL:0000763!6.96e-24!112;CL:0000049!6.96e-24!112;CL:0000557!1.88e-21!71;CL:0000839!1.25e-20!70;CL:0002009!2.43e-18!65;CL:0002194!5.40e-18!63;CL:0000576!5.40e-18!63;CL:0000040!5.40e-18!63;CL:0000559!5.40e-18!63;CL:0000219!3.30e-11!390;CL:0000134!3.49e-11!358;CL:0002320!5.74e-11!365;CL:0002393!1.00e-10!9;CL:0002397!1.00e-10!9;CL:0000094!5.59e-10!8;CL:0000048!4.48e-09!430;CL:0000723!5.12e-09!436;CL:0000034!7.09e-09!444;CL:0000081!7.30e-09!11;CL:0002371!1.68e-07!591;CL:0000144!2.19e-07!625;CL:0000838!4.87e-07!52;CL:0000080!6.54e-07!6;CL:0000542!8.36e-07!53;CL:0000051!8.36e-07!53|ontology_enrichment_celltype_v019=CL:0000094;2.84e-27;8!CL:0002393;6.77e-26;6!CL:0002397;6.77e-26;6!CL:0000623;7.18e-20;3!CL:0000081;1.05e-19;11!CL:0000775;1.72e-19;3!CL:0000766;2.60e-15;69!CL:0000097;1.04e-11;5!CL:0000576;3.94e-10;48!CL:0002087;2.13e-09;104!CL:0000226;2.43e-09;3!CL:0000842;2.43e-09;3!CL:0000738;4.12e-09;136!CL:0000767;5.62e-09;3!CL:0000763;1.97e-07;100!CL:0000860;2.56e-07;33!CL:0002057;2.56e-07;33!CL:0000037;3.50e-07;1!CL:0001024;3.50e-07;1|ontology_enrichment_celltype_v019_2=CL:0000738,3.13e-40,136;CL:0000037,7.30e-34,168;CL:0000766,2.28e-32,72;CL:0000988,7.14e-32,177;CL:0002032,1.64e-28,161;CL:0000837,1.64e-28,161;CL:0000094,2.85e-27,8;CL:0002031,3.75e-24,120;CL:0002087,4.43e-23,115;CL:0000763,3.02e-20,108;CL:0000049,3.02e-20,108;CL:0000623,7.90e-20,3;CL:0000825,7.90e-20,3;CL:0000081,1.05e-19,11;CL:0000775,1.57e-19,3;CL:0000860,2.51e-18,42;CL:0002057,2.51e-18,42;CL:0000839,3.12e-17,66;CL:0002393,3.15e-17,9;CL:0002397,3.15e-17,9;CL:0000557,6.19e-17,67;CL:0000473,9.46e-16,48;CL:0000234,9.46e-16,48;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0002194,3.81e-12,59;CL:0000576,3.81e-12,59;CL:0000040,3.81e-12,59;CL:0000559,3.81e-12,59;CL:0000097,8.99e-12,5;CL:0002028,8.99e-12,5;CL:0002009,1.11e-11,61;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000226,2.53e-09,3;CL:0000842,2.53e-09,3;CL:0000767,5.74e-09,3;CL:0000838,4.05e-08,52;CL:0000542,6.14e-08,53;CL:0000051,6.14e-08,53;CL:0001024,3.62e-07,1;CL:0000163,9.76e-07,9|ontology_enrichment_development_v019=CL:0002057;1.76e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.78e-19!80;UBERON:0002390!1.99e-17!102;UBERON:0003061!1.99e-17!102;UBERON:0001474!8.85e-17!86;UBERON:0002193!1.87e-16!112;UBERON:0004765!5.00e-15!101;UBERON:0001434!5.00e-15!101;UBERON:0002405!7.09e-12!115;UBERON:0002384!5.50e-11!375;UBERON:0003081!3.03e-07!216;UBERON:0002204!6.18e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.56e-17,76;UBERON:0002390,4.60e-16,98;UBERON:0003061,4.60e-16,98;UBERON:0001474,2.68e-15,82;UBERON:0002193,3.01e-14,108;UBERON:0004765,1.15e-13,90;UBERON:0002405,3.98e-13,93;UBERON:0002384,2.68e-12,371;UBERON:0001434,5.43e-12,100|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,1.96682138424452,0.383829398097213,2.01260960310899,0,0,0,0.232401601740905,0.142169232487422,1.46800219667424,2.76997704265939,5.81578897663411,7.37836960433896,0,0,0,0,0,0.242584061187816,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,1.72372840368309,0.645484683583826,2.70852973188684,0,0.545812300115692,0,1.22433556948361,0,0.639337125799041,0,0.199463657621632,0,0.870627715885752,1.70215567407342,1.86846674698672,0.75374599577023,1.0429658368404,0.217188844705117,0,1.10483290796269,0.949387162322653,0.422510572623884,1.70083439972035,2.30624510059213,0.22465726229299,0.300353785683013,0.64290234678832,0,0.39783335439818,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,2.84606484554724,4.11066032559657,2.6759125968766,0,0.560508562981536,0,0.786839080455332,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.60464117470104,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0.563057402416611,0,0.949265659568129,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1342 | |||
|description=CAGE_peak_at_chr1:155108603..155108650,- | |||
|id=chr1:155108603..155108650,- | |||
|ontology_enrichment_celltype=CL:0000988!6.20e-34!182;CL:0000738!3.05e-33!140;CL:0000037!2.44e-32!172;CL:0000566!2.44e-32!172;CL:0002032!9.82e-31!165;CL:0000837!9.82e-31!165;CL:0002057!1.81e-29!42;CL:0000766!1.01e-28!76;CL:0000860!2.23e-28!45;CL:0002031!6.98e-27!124;CL:0002087!5.31e-25!119;CL:0000763!6.96e-24!112;CL:0000049!6.96e-24!112;CL:0000557!1.88e-21!71;CL:0000839!1.25e-20!70;CL:0002009!2.43e-18!65;CL:0002194!5.40e-18!63;CL:0000576!5.40e-18!63;CL:0000040!5.40e-18!63;CL:0000559!5.40e-18!63;CL:0000219!3.30e-11!390;CL:0000134!3.49e-11!358;CL:0002320!5.74e-11!365;CL:0002393!1.00e-10!9;CL:0002397!1.00e-10!9;CL:0000094!5.59e-10!8;CL:0000048!4.48e-09!430;CL:0000723!5.12e-09!436;CL:0000034!7.09e-09!444;CL:0000081!7.30e-09!11;CL:0002371!1.68e-07!591;CL:0000144!2.19e-07!625;CL:0000838!4.87e-07!52;CL:0000080!6.54e-07!6;CL:0000542!8.36e-07!53;CL:0000051!8.36e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.84e-27;8!CL:0002393;6.77e-26;6!CL:0002397;6.77e-26;6!CL:0000623;7.18e-20;3!CL:0000081;1.05e-19;11!CL:0000775;1.72e-19;3!CL:0000766;2.60e-15;69!CL:0000097;1.04e-11;5!CL:0000576;3.94e-10;48!CL:0002087;2.13e-09;104!CL:0000226;2.43e-09;3!CL:0000842;2.43e-09;3!CL:0000738;4.12e-09;136!CL:0000767;5.62e-09;3!CL:0000763;1.97e-07;100!CL:0000860;2.56e-07;33!CL:0002057;2.56e-07;33!CL:0000037;3.50e-07;1!CL:0001024;3.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.13e-40,136;CL:0000037,7.30e-34,168;CL:0000766,2.28e-32,72;CL:0000988,7.14e-32,177;CL:0002032,1.64e-28,161;CL:0000837,1.64e-28,161;CL:0000094,2.85e-27,8;CL:0002031,3.75e-24,120;CL:0002087,4.43e-23,115;CL:0000763,3.02e-20,108;CL:0000049,3.02e-20,108;CL:0000623,7.90e-20,3;CL:0000825,7.90e-20,3;CL:0000081,1.05e-19,11;CL:0000775,1.57e-19,3;CL:0000860,2.51e-18,42;CL:0002057,2.51e-18,42;CL:0000839,3.12e-17,66;CL:0002393,3.15e-17,9;CL:0002397,3.15e-17,9;CL:0000557,6.19e-17,67;CL:0000473,9.46e-16,48;CL:0000234,9.46e-16,48;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0002194,3.81e-12,59;CL:0000576,3.81e-12,59;CL:0000040,3.81e-12,59;CL:0000559,3.81e-12,59;CL:0000097,8.99e-12,5;CL:0002028,8.99e-12,5;CL:0002009,1.11e-11,61;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000226,2.53e-09,3;CL:0000842,2.53e-09,3;CL:0000767,5.74e-09,3;CL:0000838,4.05e-08,52;CL:0000542,6.14e-08,53;CL:0000051,6.14e-08,53;CL:0001024,3.62e-07,1;CL:0000163,9.76e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.78e-19!80;UBERON:0002390!1.99e-17!102;UBERON:0003061!1.99e-17!102;UBERON:0001474!8.85e-17!86;UBERON:0002193!1.87e-16!112;UBERON:0004765!5.00e-15!101;UBERON:0001434!5.00e-15!101;UBERON:0002405!7.09e-12!115;UBERON:0002384!5.50e-11!375;UBERON:0003081!3.03e-07!216;UBERON:0002204!6.18e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.56e-17,76;UBERON:0002390,4.60e-16,98;UBERON:0003061,4.60e-16,98;UBERON:0001474,2.68e-15,82;UBERON:0002193,3.01e-14,108;UBERON:0004765,1.15e-13,90;UBERON:0002405,3.98e-13,93;UBERON:0002384,2.68e-12,371;UBERON:0001434,5.43e-12,100 | |||
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|short_description=p@chr1:155108603..155108650,- | |||
}} |
Revision as of 00:43, 12 September 2013
Short description: | p@chr1:155108603..155108650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:155108603..155108650, - |
Coexpression cluster: | C1342_CD14_CD19_Eosinophils_Neutrophils_Peripheral_Natural_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.56e-17 | 76 |
hematopoietic system | 4.60e-16 | 98 |
blood island | 4.60e-16 | 98 |
bone element | 2.68e-15 | 82 |
hemolymphoid system | 3.01e-14 | 108 |
skeletal element | 1.15e-13 | 90 |
immune system | 3.98e-13 | 93 |
connective tissue | 2.68e-12 | 371 |
skeletal system | 5.43e-12 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.