FFCP PHASE1:Hg19::chr1:28199047..28199071,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9473|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16839|TSSclassifier=S|UniProt=Q5TEJ8,Q5TEK2,Q8N1V6|association_with_transcript=0bp_to_ENST00000328928,ENST00000373925,ENST00000373927,ENST00000427466,ENST00000442118,ENST00000467258,NM_001039477,NM_001105556,NM_004848,uc001boz.2,uc001bpa.2,uc001bpc.3,uc010ofn.1,uc010ofo.1_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_C1orf38_5end|id=chr1:28199047..28199071,+|ontology_enrichment_celltype=CL:0000037!7.82e-45!172;CL:0000566!7.82e-45!172;CL:0000988!4.02e-43!182;CL:0000738!4.81e-43!140;CL:0002032!4.11e-42!165;CL:0000837!4.11e-42!165;CL:0002087!1.14e-36!119;CL:0002031!4.23e-35!124;CL:0000763!2.24e-31!112;CL:0000049!2.24e-31!112;CL:0000766!2.71e-29!76;CL:0002009!3.10e-27!65;CL:0002057!6.59e-27!42;CL:0002194!1.49e-26!63;CL:0000576!1.49e-26!63;CL:0000040!1.49e-26!63;CL:0000559!1.49e-26!63;CL:0000557!2.22e-25!71;CL:0000839!1.01e-24!70;CL:0000860!4.35e-22!45;CL:0000134!1.00e-11!358;CL:0002320!1.07e-11!365;CL:0000838!4.76e-10!52;CL:0000542!1.07e-09!53;CL:0000051!1.07e-09!53;CL:0000219!1.08e-08!390;CL:0000048!3.84e-07!430;CL:0000034!5.49e-07!444;CL:0002393!6.86e-07!9;CL:0002397!6.86e-07!9;CL:0000451!8.00e-07!10;CL:0000791!9.66e-07!18;CL:0000789!9.66e-07!18;CL:0002420!9.66e-07!18;CL:0002419!9.66e-07!18;CL:0000790!9.66e-07!18|ontology_enrichment_celltype_v019=CL:0000860;1.17e-19;33!CL:0002057;1.17e-19;33!CL:0000473;3.43e-19;39!CL:0000234;3.43e-19;39!CL:0000576;4.96e-18;48!CL:0000766;1.92e-14;69!CL:0002087;1.60e-11;104!CL:0000763;2.98e-10;100!CL:0000738;3.05e-10;136!CL:0000988;1.41e-08;177!CL:0000451;7.43e-07;10!CL:0000791;8.57e-07;18!CL:0000789;8.57e-07;18!CL:0002419;8.57e-07;18|ontology_enrichment_celltype_v019_2=CL:0000037,2.81e-48,168;CL:0000738,4.67e-47,136;CL:0000988,1.57e-46,177;CL:0002032,1.23e-45,161;CL:0000837,1.23e-45,161;CL:0002087,8.32e-41,115;CL:0002031,5.12e-39,120;CL:0000763,3.88e-35,108;CL:0000049,3.88e-35,108;CL:0000766,3.72e-34,72;CL:0002009,2.19e-32,61;CL:0002194,1.00e-31,59;CL:0000576,1.00e-31,59;CL:0000040,1.00e-31,59;CL:0000559,1.00e-31,59;CL:0000473,3.60e-30,48;CL:0000234,3.60e-30,48;CL:0000557,5.36e-30,67;CL:0000839,2.65e-29,66;CL:0000860,4.91e-27,42;CL:0002057,4.91e-27,42;CL:0000134,2.68e-12,354;CL:0002320,2.90e-12,361;CL:0000838,4.91e-10,52;CL:0000542,1.10e-09,53;CL:0000051,1.10e-09,53;CL:0000219,4.60e-09,386;CL:0000048,1.34e-07,427;CL:0000034,1.88e-07,441;CL:0002393,6.45e-07,9;CL:0002397,6.45e-07,9;CL:0000451,7.52e-07,10;CL:0000723,9.00e-07,433;CL:0000791,9.09e-07,18;CL:0000789,9.09e-07,18;CL:0002420,9.09e-07,18;CL:0002419,9.09e-07,18;CL:0000790,9.09e-07,18|ontology_enrichment_development_v019=CL:0002057;1.19e-19;42!CL:0000049;4.45e-11;108!CL:0000790;8.57e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.42e-34!112;UBERON:0002390!7.23e-33!102;UBERON:0003061!7.23e-33!102;UBERON:0002371!1.74e-24!80;UBERON:0002405!1.40e-21!115;UBERON:0001474!1.98e-20!86;UBERON:0004765!9.92e-18!101;UBERON:0001434!9.92e-18!101;UBERON:0007023!2.21e-13!115;UBERON:0003081!1.71e-10!216;UBERON:0002384!2.08e-10!375;UBERON:0002204!9.57e-08!167|ontology_enrichment_uberon_v019=UBERON:0002390;4.40e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.89e-38,108;UBERON:0002390,3.39e-37,98;UBERON:0003061,3.39e-37,98;UBERON:0002405,7.00e-32,93;UBERON:0002371,1.20e-28,76;UBERON:0001474,1.08e-23,82;UBERON:0004765,8.65e-22,90;UBERON:0001434,1.19e-19,100;UBERON:0007023,2.30e-13,114;UBERON:0002384,7.53e-11,371;UBERON:0003081,1.52e-10,203;UBERON:0002204,1.37e-08,167|phase1_expression=1.09007027562334,5.78071414505655,0.704772020479856,0,1.34088328328186,1.74467704820074,30.3959853801973,9.47579810140246,34.4765029223787,2.21160542851358,5.58240934377942,0.655324116390517,1.05506791291381,8.16857929536308,7.29074226601415,4.03395087871065,1.80808358407193,2.92124036154949,3.90346239032406,1.96993692922861,1.63200552995402,5.64218498660558,2.0036519099174,1.50561867580173,0.753255837568817,51.808289097111,49.0140519016176,42.7399542533278,323.345435569799,186.541087475245,425.279890749261,2.75826367343678,3.0120591877825,3.69754010166788,14.9511697119982,15.9229540385912,57.2520856702952,309.68343336932,254.69144828708,307.938425545794,125.616581048598,100.407036465884,162.272607609538,400.572147837701,312.125529486957,417.729753365419,354.221852244263,194.071243146302,259.224232439202,509.790919194851,444.43882582799,464.214617271293,452.65107880718,362.116907490526,287.104151580005,438.981135813354,232.516039849285,256.858942720732,407.703744638042,321.570885130246,338.209339547693,673.886206281461,594.601163370085,696.877467120955,295.14279568527,158.867862913519,187.469496947668,575.861940768456,564.766000649078,576.636382692085,306.332148332485,234.592854124079,286.08199824656,357.232689153494,344.418965943371,407.157089577266,440.328234094261,435.212635454685,473.336852822901,411.273389218622,377.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16839 | |||
|TSSclassifier=S | |||
|UniProt=Q5TEJ8,Q5TEK2,Q8N1V6 | |||
|association_with_transcript=0bp_to_ENST00000328928,ENST00000373925,ENST00000373927,ENST00000427466,ENST00000442118,ENST00000467258,NM_001039477,NM_001105556,NM_004848,uc001boz.2,uc001bpa.2,uc001bpc.3,uc010ofn.1,uc010ofo.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_C1orf38_5end | |||
|id=chr1:28199047..28199071,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.82e-45!172;CL:0000566!7.82e-45!172;CL:0000988!4.02e-43!182;CL:0000738!4.81e-43!140;CL:0002032!4.11e-42!165;CL:0000837!4.11e-42!165;CL:0002087!1.14e-36!119;CL:0002031!4.23e-35!124;CL:0000763!2.24e-31!112;CL:0000049!2.24e-31!112;CL:0000766!2.71e-29!76;CL:0002009!3.10e-27!65;CL:0002057!6.59e-27!42;CL:0002194!1.49e-26!63;CL:0000576!1.49e-26!63;CL:0000040!1.49e-26!63;CL:0000559!1.49e-26!63;CL:0000557!2.22e-25!71;CL:0000839!1.01e-24!70;CL:0000860!4.35e-22!45;CL:0000134!1.00e-11!358;CL:0002320!1.07e-11!365;CL:0000838!4.76e-10!52;CL:0000542!1.07e-09!53;CL:0000051!1.07e-09!53;CL:0000219!1.08e-08!390;CL:0000048!3.84e-07!430;CL:0000034!5.49e-07!444;CL:0002393!6.86e-07!9;CL:0002397!6.86e-07!9;CL:0000451!8.00e-07!10;CL:0000791!9.66e-07!18;CL:0000789!9.66e-07!18;CL:0002420!9.66e-07!18;CL:0002419!9.66e-07!18;CL:0000790!9.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-19;33!CL:0002057;1.17e-19;33!CL:0000473;3.43e-19;39!CL:0000234;3.43e-19;39!CL:0000576;4.96e-18;48!CL:0000766;1.92e-14;69!CL:0002087;1.60e-11;104!CL:0000763;2.98e-10;100!CL:0000738;3.05e-10;136!CL:0000988;1.41e-08;177!CL:0000451;7.43e-07;10!CL:0000791;8.57e-07;18!CL:0000789;8.57e-07;18!CL:0002419;8.57e-07;18 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.19e-19;42!CL:0000049;4.45e-11;108!CL:0000790;8.57e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.42e-34!112;UBERON:0002390!7.23e-33!102;UBERON:0003061!7.23e-33!102;UBERON:0002371!1.74e-24!80;UBERON:0002405!1.40e-21!115;UBERON:0001474!1.98e-20!86;UBERON:0004765!9.92e-18!101;UBERON:0001434!9.92e-18!101;UBERON:0007023!2.21e-13!115;UBERON:0003081!1.71e-10!216;UBERON:0002384!2.08e-10!375;UBERON:0002204!9.57e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.40e-07;32 | |||
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| |||
|short_description=p1@C1orf38 | |||
}} |
Revision as of 05:05, 12 September 2013
Short description: | p1@C1orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C1orf38_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000328928, ENST00000373925, ENST00000373927, ENST00000427466, ENST00000442118, ENST00000467258, NM_001039477, NM_001105556, NM_004848, uc001boz.2, uc001bpa.2, uc001bpc.3, uc010ofn.1, uc010ofo.1_5end |
EntrezGene: | C1orf38 |
HGNC: | 16839 |
UniProt: | Q5TEJ8Q5TEK2Q8N1V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.89e-38 | 108 |
hematopoietic system | 3.39e-37 | 98 |
blood island | 3.39e-37 | 98 |
immune system | 7.00e-32 | 93 |
bone marrow | 1.20e-28 | 76 |
bone element | 1.08e-23 | 82 |
skeletal element | 8.65e-22 | 90 |
skeletal system | 1.19e-19 | 100 |
adult organism | 2.30e-13 | 114 |
connective tissue | 7.53e-11 | 371 |
lateral plate mesoderm | 1.52e-10 | 203 |
musculoskeletal system | 1.37e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.