FFCP PHASE1:Hg19::chr20:36779386..36779404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C454|description=CAGE_peak_at_chr20:36779386..36779404,-|id=chr20:36779386..36779404,-|ontology_enrichment_celltype=CL:0000192!2.09e-15!42;CL:0000514!2.09e-15!42;CL:0000222!3.31e-14!119;CL:0000359!7.21e-13!32;CL:0000183!8.75e-11!59;CL:0000680!6.92e-10!57;CL:0000056!6.92e-10!57;CL:0000355!6.92e-10!57;CL:0000187!2.07e-09!54;CL:0002078!6.50e-09!44;CL:0000115!9.12e-09!35;CL:0002139!1.61e-08!24;CL:0000220!1.64e-08!246;CL:0002321!3.51e-08!248;CL:0000393!1.56e-07!60;CL:0000211!1.56e-07!60;CL:1000497!5.04e-07!18;CL:0002518!5.04e-07!18;CL:0002681!7.91e-07!13;CL:0002584!7.91e-07!13|ontology_enrichment_celltype_v019=CL:0000349;1.28e-11;19!CL:0000115;3.28e-11;36!CL:0000359;8.66e-10;32!CL:0002188;8.83e-09;5!CL:1000746;9.21e-09;7!CL:1000612;9.21e-09;7!CL:0002139;1.80e-08;24!CL:0000192;2.96e-08;43!CL:0002078;3.99e-07;45|ontology_enrichment_celltype_v019_2=CL:0000115,1.20e-11,36;CL:0000349,1.35e-11,19;CL:0000222,7.20e-11,121;CL:0000192,1.34e-10,43;CL:0000514,1.34e-10,43;CL:0000359,3.69e-10,32;CL:0002078,1.73e-09,45;CL:0002188,8.22e-09,5;CL:1000746,9.07e-09,7;CL:1000612,9.07e-09,7;CL:0002139,2.38e-08,24;CL:0000187,3.84e-07,55|ontology_enrichment_development_v019=CL:0000514;2.96e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!6.28e-25!118;UBERON:0002049!3.31e-23!79;UBERON:0007798!3.31e-23!79;UBERON:0000055!5.40e-21!69;UBERON:0001981!5.45e-19!60;UBERON:0007500!5.45e-19!60;UBERON:0004537!5.45e-19!60;UBERON:0006965!5.45e-19!60;UBERON:0004872!1.50e-18!84;UBERON:0000477!9.93e-17!286;UBERON:0001637!1.47e-16!42;UBERON:0003509!1.47e-16!42;UBERON:0004572!1.47e-16!42;UBERON:0001009!3.05e-16!113;UBERON:0000490!5.01e-16!138;UBERON:0005256!3.19e-15!143;UBERON:0004535!4.41e-15!110;UBERON:0004111!5.97e-15!241;UBERON:0002100!3.43e-14!216;UBERON:0004573!4.89e-13!33;UBERON:0004571!4.89e-13!33;UBERON:0000468!8.80e-12!659;UBERON:0000025!1.18e-11!194;UBERON:0000119!4.84e-11!312;UBERON:0003104!5.26e-11!238;UBERON:0009142!5.26e-11!238;UBERON:0000483!5.43e-11!309;UBERON:0000926!1.23e-10!448;UBERON:0004120!1.23e-10!448;UBERON:0006603!1.23e-10!448;UBERON:0000481!2.02e-10!347;UBERON:0005631!7.28e-10!14;UBERON:0000158!7.28e-10!14;UBERON:0001134!2.38e-09!61;UBERON:0002036!2.38e-09!61;UBERON:0003082!2.38e-09!61;UBERON:0002385!3.45e-09!63;UBERON:0001015!3.45e-09!63;UBERON:0000383!3.45e-09!63;UBERON:0000467!4.27e-09!625;UBERON:0000480!5.86e-09!626;UBERON:0000478!1.03e-08!24;UBERON:0000947!5.33e-08!21;UBERON:0010191!5.33e-08!21;UBERON:0000914!5.49e-08!83;UBERON:0002329!5.49e-08!83;UBERON:0003077!5.49e-08!83;UBERON:0003059!5.49e-08!83;UBERON:0007282!5.49e-08!83;UBERON:0009618!5.49e-08!83;UBERON:0007285!5.49e-08!83;UBERON:0003064!7.60e-08!37;UBERON:0003103!1.10e-07!69;UBERON:0004290!1.10e-07!70;UBERON:0001008!1.13e-07!45;UBERON:0006554!2.19e-07!44;UBERON:0000486!3.57e-07!82;UBERON:0001225!7.91e-07!13;UBERON:0008987!7.91e-07!13|ontology_enrichment_uberon_v019=UBERON:0001637;2.26e-12;42!UBERON:0003509;2.26e-12;42!UBERON:0004572;2.26e-12;42!UBERON:0005631;6.64e-11;10!UBERON:0000158;6.64e-11;10!UBERON:0004573;8.46e-11;33!UBERON:0004571;8.46e-11;33!UBERON:0000478;3.49e-10;24!UBERON:0002049;5.83e-09;75!UBERON:0007798;5.83e-09;75!UBERON:0003914;8.52e-09;74!UBERON:0000074;9.21e-09;7!UBERON:0001229;9.21e-09;7!UBERON:0007500;4.52e-08;56!UBERON:0001981;4.52e-08;56!UBERON:0004537;4.52e-08;56!UBERON:0000055;1.19e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0002049,7.35e-19,78;UBERON:0007798,7.35e-19,78;UBERON:0000055,9.17e-19,68;UBERON:0003914,5.55e-18,117;UBERON:0001637,5.14e-17,42;UBERON:0003509,5.14e-17,42;UBERON:0004572,5.14e-17,42;UBERON:0007500,6.56e-16,59;UBERON:0001981,6.56e-16,59;UBERON:0004537,6.56e-16,59;UBERON:0006965,6.56e-16,59;UBERON:0001009,1.72e-13,112;UBERON:0004872,6.79e-13,83;UBERON:0004535,3.33e-12,109;UBERON:0000490,5.16e-12,148;UBERON:0004573,5.68e-12,33;UBERON:0004571,5.68e-12,33;UBERON:0005631,1.18e-11,14;UBERON:0000158,1.18e-11,14;UBERON:0005256,3.46e-11,122;UBERON:0000478,3.64e-10,24;UBERON:0003104,1.20e-09,160;UBERON:0009142,1.20e-09,160;UBERON:0007503,2.53e-09,78;UBERON:0000926,3.08e-09,315;UBERON:0004120,3.08e-09,315;UBERON:0006603,3.08e-09,315;UBERON:0010532,9.07e-09,7;UBERON:0000074,9.07e-09,7;UBERON:0001229,9.07e-09,7;UBERON:0001230,9.07e-09,7;UBERON:0003220,9.07e-09,7;UBERON:0005749,9.07e-09,7;UBERON:0004199,9.07e-09,7;UBERON:0004209,9.07e-09,7;UBERON:0004198,9.07e-09,7;UBERON:0003081,4.36e-08,203;UBERON:0002100,6.65e-08,199;UBERON:0004111,1.07e-07,240;UBERON:0005103,1.50e-07,8;UBERON:0000083,1.50e-07,8;UBERON:0009201,1.50e-07,8;UBERON:0006553,1.50e-07,8;UBERON:0003074,1.50e-07,8;UBERON:0003060,1.50e-07,8;UBERON:0003124,7.25e-07,7|phase1_expression=1.2717486548939,1.71280419112787,0.140954404095971,2.00146596706261,1.787844377709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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36779386..36779404,- | |||
|id=chr20:36779386..36779404,- | |||
|ontology_enrichment_celltype=CL:0000192!2.09e-15!42;CL:0000514!2.09e-15!42;CL:0000222!3.31e-14!119;CL:0000359!7.21e-13!32;CL:0000183!8.75e-11!59;CL:0000680!6.92e-10!57;CL:0000056!6.92e-10!57;CL:0000355!6.92e-10!57;CL:0000187!2.07e-09!54;CL:0002078!6.50e-09!44;CL:0000115!9.12e-09!35;CL:0002139!1.61e-08!24;CL:0000220!1.64e-08!246;CL:0002321!3.51e-08!248;CL:0000393!1.56e-07!60;CL:0000211!1.56e-07!60;CL:1000497!5.04e-07!18;CL:0002518!5.04e-07!18;CL:0002681!7.91e-07!13;CL:0002584!7.91e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.28e-11;19!CL:0000115;3.28e-11;36!CL:0000359;8.66e-10;32!CL:0002188;8.83e-09;5!CL:1000746;9.21e-09;7!CL:1000612;9.21e-09;7!CL:0002139;1.80e-08;24!CL:0000192;2.96e-08;43!CL:0002078;3.99e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.20e-11,36;CL:0000349,1.35e-11,19;CL:0000222,7.20e-11,121;CL:0000192,1.34e-10,43;CL:0000514,1.34e-10,43;CL:0000359,3.69e-10,32;CL:0002078,1.73e-09,45;CL:0002188,8.22e-09,5;CL:1000746,9.07e-09,7;CL:1000612,9.07e-09,7;CL:0002139,2.38e-08,24;CL:0000187,3.84e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.26e-12;42!UBERON:0003509;2.26e-12;42!UBERON:0004572;2.26e-12;42!UBERON:0005631;6.64e-11;10!UBERON:0000158;6.64e-11;10!UBERON:0004573;8.46e-11;33!UBERON:0004571;8.46e-11;33!UBERON:0000478;3.49e-10;24!UBERON:0002049;5.83e-09;75!UBERON:0007798;5.83e-09;75!UBERON:0003914;8.52e-09;74!UBERON:0000074;9.21e-09;7!UBERON:0001229;9.21e-09;7!UBERON:0007500;4.52e-08;56!UBERON:0001981;4.52e-08;56!UBERON:0004537;4.52e-08;56!UBERON:0000055;1.19e-07;65 | |||
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| |||
|short_description=p@chr20:36779386..36779404,- | |||
}} |
Revision as of 08:25, 12 September 2013
Short description: | p@chr20:36779386..36779404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:36779386..36779404, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.20e-11 | 36 |
extraembryonic cell | 1.35e-11 | 19 |
mesodermal cell | 7.20e-11 | 121 |
smooth muscle cell | 1.34e-10 | 43 |
smooth muscle myoblast | 1.34e-10 | 43 |
vascular associated smooth muscle cell | 3.69e-10 | 32 |
meso-epithelial cell | 1.73e-09 | 45 |
glomerular endothelial cell | 8.22e-09 | 5 |
glomerular cell | 9.07e-09 | 7 |
kidney corpuscule cell | 9.07e-09 | 7 |
endothelial cell of vascular tree | 2.38e-08 | 24 |
muscle cell | 3.84e-07 | 55 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.