FFCP PHASE1:Hg19::chr21:43482998..43483023,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89766|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12560|TSSclassifier=S|UniProt=Q5DID0|association_with_transcript=-44bp_to_ENST00000400424,ENST00000400427,NM_001199527,NM_001199528,uc002zad.1,uc002zae.1_5end|coexpression_cluster_id=C23|description=CAGE_peak_1_at_UMODL1_5end|id=chr21:43482998..43483023,+|ontology_enrichment_celltype=CL:0000838!4.83e-52!52;CL:0000542!9.17e-51!53;CL:0000051!9.17e-51!53;CL:0000738!4.64e-45!140;CL:0000037!1.57e-42!172;CL:0000566!1.57e-42!172;CL:0002087!2.24e-40!119;CL:0000988!7.92e-39!182;CL:0002031!6.81e-36!124;CL:0002032!1.26e-35!165;CL:0000837!1.26e-35!165;CL:0000791!1.82e-25!18;CL:0000789!1.82e-25!18;CL:0002420!1.82e-25!18;CL:0002419!1.82e-25!18;CL:0000790!1.82e-25!18;CL:0000945!2.80e-25!24;CL:0000826!2.80e-25!24;CL:0000084!9.27e-23!25;CL:0000827!9.27e-23!25;CL:0000236!6.69e-20!14;CL:0000625!2.09e-17!11;CL:0002393!1.69e-14!9;CL:0002397!1.69e-14!9;CL:0000624!1.48e-11!6;CL:0000134!8.48e-11!358;CL:0002320!3.54e-10!365;CL:0000219!1.90e-08!390|ontology_enrichment_celltype_v019=CL:0000791;5.82e-42;18!CL:0000789;5.82e-42;18!CL:0002419;5.82e-42;18!CL:0000542;1.16e-32;53!CL:0000084;2.87e-32;25!CL:0000625;4.71e-28;11!CL:0000236;1.33e-26;13!CL:0000624;2.75e-18;6!CL:0000945;1.94e-15;24!CL:0002393;2.29e-15;6!CL:0002397;2.29e-15;6!CL:0002087;2.14e-11;104!CL:0000898;4.63e-10;3!CL:0000623;1.12e-09;3!CL:0000875;1.81e-09;3!CL:0002396;1.81e-09;3!CL:0000226;9.68e-09;3!CL:0000842;9.68e-09;3!CL:0000767;1.48e-08;3!CL:0000738;3.03e-07;136!CL:0000815;3.13e-07;2!CL:0000792;3.13e-07;2!CL:0002677;3.13e-07;2|ontology_enrichment_celltype_v019_2=CL:0000838,2.10e-52,52;CL:0000542,3.14e-51,53;CL:0000051,3.14e-51,53;CL:0000791,5.43e-42,18;CL:0000789,5.43e-42,18;CL:0002420,5.43e-42,18;CL:0002419,5.43e-42,18;CL:0000790,5.43e-42,18;CL:0002087,2.20e-38,115;CL:0000738,1.99e-37,136;CL:0000037,2.31e-32,168;CL:0000084,3.24e-32,25;CL:0000827,3.24e-32,25;CL:0002031,8.23e-31,120;CL:0000988,4.87e-30,177;CL:0002032,4.23e-28,161;CL:0000837,4.23e-28,161;CL:0000625,4.31e-28,11;CL:0000236,1.56e-24,14;CL:0002393,3.29e-23,9;CL:0002397,3.29e-23,9;CL:0000624,2.80e-18,6;CL:0000945,1.92e-15,24;CL:0000826,1.92e-15,24;CL:0000898,4.71e-10,3;CL:0000623,1.15e-09,3;CL:0000825,1.15e-09,3;CL:0000875,1.81e-09,3;CL:0002396,1.81e-09,3;CL:0000226,8.70e-09,3;CL:0000842,8.70e-09,3;CL:0000767,1.23e-08,3;CL:0000134,1.39e-08,354;CL:0002320,3.49e-08,361;CL:0000815,3.13e-07,2;CL:0000792,3.13e-07,2;CL:0002677,3.13e-07,2;CL:0000219,8.64e-07,386|ontology_enrichment_development_v019=CL:0000790;5.82e-42;18!CL:0000051;1.16e-32;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!6.13e-11!15;UBERON:0000179!6.13e-11!15;UBERON:0000463!6.13e-11!15;UBERON:0002390!4.08e-10!102;UBERON:0003061!4.08e-10!102;UBERON:0002193!1.03e-09!112;UBERON:0002384!2.44e-09!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-15;15!UBERON:0000179;3.05e-15;15!UBERON:0000463;3.05e-15;15!UBERON:0002390;4.98e-10;32!UBERON:0002370;7.14e-07;2!UBERON:0005058;7.14e-07;2!UBERON:0009113;7.14e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.38e-15,15;UBERON:0000179,3.38e-15,15;UBERON:0000463,3.38e-15,15;UBERON:0002390,2.25e-08,98;UBERON:0003061,2.25e-08,98;UBERON:0002384,1.22e-07,371;UBERON:0002370,2.27e-07,4;UBERON:0005058,2.27e-07,4;UBERON:0009113,2.27e-07,4;UBERON:0003295,2.27e-07,4;UBERON:0005562,2.27e-07,4;UBERON:0002193,4.03e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.472264687882075,3.54027849164014,1.91914699048606,3.09632246632152,0,0,0,1.39440961044543,0.284338464974843,3.52320527201817,1.66198622559563,2.20598892217156,1.95309783644267,0,0,0.257575567634187,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,0,0,5.70389273042243,3.18906449947565,2.51590374610051,0.336985893439485,0,0,5.98526761856622,5.17183360717634,6.02791707423292,5.27988733383968,3.27683166757279,5.33705552318133,1.28019066769952,4.00395987036012,2.29900975981793,1.98313461835459,1.90810750907073,2.27685187643779,1.76171156811282,3.05818582500183,3.96513985737078,1.12101712596307,0.790152254325231,5.31116379307349,12.1833336452241,13.9809019319666,0.83593247695339,11.7332015988093,10.8892995318989,7.79306913631645,1.55974639639243,9.72199494666963,4.87374568083967,10.0197429593056,0.128091319725675,1.8208308658383,0.164437904603676,0.276350017785848,0.869409257205157,9.93519973185805,5.08327573370455,6.27213142829861,0.339928028092699,11.1133943144557,7.90343124610049,3.79529538029254,4.14135038621326,2.60433381542567,3.8018081777935,1.6563263098555,2.30375900077953,1.24930726552346,1.89421801635213,4.10563998460523,8.87069670188823,10.6976078313403,10.2825326756787,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12560 | |||
|TSSclassifier=S | |||
|UniProt=Q5DID0 | |||
|association_with_transcript=-44bp_to_ENST00000400424,ENST00000400427,NM_001199527,NM_001199528,uc002zad.1,uc002zae.1_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_UMODL1_5end | |||
|id=chr21:43482998..43483023,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.83e-52!52;CL:0000542!9.17e-51!53;CL:0000051!9.17e-51!53;CL:0000738!4.64e-45!140;CL:0000037!1.57e-42!172;CL:0000566!1.57e-42!172;CL:0002087!2.24e-40!119;CL:0000988!7.92e-39!182;CL:0002031!6.81e-36!124;CL:0002032!1.26e-35!165;CL:0000837!1.26e-35!165;CL:0000791!1.82e-25!18;CL:0000789!1.82e-25!18;CL:0002420!1.82e-25!18;CL:0002419!1.82e-25!18;CL:0000790!1.82e-25!18;CL:0000945!2.80e-25!24;CL:0000826!2.80e-25!24;CL:0000084!9.27e-23!25;CL:0000827!9.27e-23!25;CL:0000236!6.69e-20!14;CL:0000625!2.09e-17!11;CL:0002393!1.69e-14!9;CL:0002397!1.69e-14!9;CL:0000624!1.48e-11!6;CL:0000134!8.48e-11!358;CL:0002320!3.54e-10!365;CL:0000219!1.90e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.82e-42;18!CL:0000789;5.82e-42;18!CL:0002419;5.82e-42;18!CL:0000542;1.16e-32;53!CL:0000084;2.87e-32;25!CL:0000625;4.71e-28;11!CL:0000236;1.33e-26;13!CL:0000624;2.75e-18;6!CL:0000945;1.94e-15;24!CL:0002393;2.29e-15;6!CL:0002397;2.29e-15;6!CL:0002087;2.14e-11;104!CL:0000898;4.63e-10;3!CL:0000623;1.12e-09;3!CL:0000875;1.81e-09;3!CL:0002396;1.81e-09;3!CL:0000226;9.68e-09;3!CL:0000842;9.68e-09;3!CL:0000767;1.48e-08;3!CL:0000738;3.03e-07;136!CL:0000815;3.13e-07;2!CL:0000792;3.13e-07;2!CL:0002677;3.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.10e-52,52;CL:0000542,3.14e-51,53;CL:0000051,3.14e-51,53;CL:0000791,5.43e-42,18;CL:0000789,5.43e-42,18;CL:0002420,5.43e-42,18;CL:0002419,5.43e-42,18;CL:0000790,5.43e-42,18;CL:0002087,2.20e-38,115;CL:0000738,1.99e-37,136;CL:0000037,2.31e-32,168;CL:0000084,3.24e-32,25;CL:0000827,3.24e-32,25;CL:0002031,8.23e-31,120;CL:0000988,4.87e-30,177;CL:0002032,4.23e-28,161;CL:0000837,4.23e-28,161;CL:0000625,4.31e-28,11;CL:0000236,1.56e-24,14;CL:0002393,3.29e-23,9;CL:0002397,3.29e-23,9;CL:0000624,2.80e-18,6;CL:0000945,1.92e-15,24;CL:0000826,1.92e-15,24;CL:0000898,4.71e-10,3;CL:0000623,1.15e-09,3;CL:0000825,1.15e-09,3;CL:0000875,1.81e-09,3;CL:0002396,1.81e-09,3;CL:0000226,8.70e-09,3;CL:0000842,8.70e-09,3;CL:0000767,1.23e-08,3;CL:0000134,1.39e-08,354;CL:0002320,3.49e-08,361;CL:0000815,3.13e-07,2;CL:0000792,3.13e-07,2;CL:0002677,3.13e-07,2;CL:0000219,8.64e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;5.82e-42;18!CL:0000051;1.16e-32;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.13e-11!15;UBERON:0000179!6.13e-11!15;UBERON:0000463!6.13e-11!15;UBERON:0002390!4.08e-10!102;UBERON:0003061!4.08e-10!102;UBERON:0002193!1.03e-09!112;UBERON:0002384!2.44e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-15;15!UBERON:0000179;3.05e-15;15!UBERON:0000463;3.05e-15;15!UBERON:0002390;4.98e-10;32!UBERON:0002370;7.14e-07;2!UBERON:0005058;7.14e-07;2!UBERON:0009113;7.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.38e-15,15;UBERON:0000179,3.38e-15,15;UBERON:0000463,3.38e-15,15;UBERON:0002390,2.25e-08,98;UBERON:0003061,2.25e-08,98;UBERON:0002384,1.22e-07,371;UBERON:0002370,2.27e-07,4;UBERON:0005058,2.27e-07,4;UBERON:0009113,2.27e-07,4;UBERON:0003295,2.27e-07,4;UBERON:0005562,2.27e-07,4;UBERON:0002193,4.03e-07,108 | |||
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|short_description=p1@UMODL1 | |||
}} |
Revision as of 10:30, 12 September 2013
Short description: | p1@UMODL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UMODL1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -44bp_to_ENST00000400424, ENST00000400427, NM_001199527, NM_001199528, uc002zad.1, uc002zae.1_5end |
EntrezGene: | UMODL1 |
HGNC: | 12560 |
UniProt: | Q5DID0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.38e-15 | 15 |
haemolymphatic fluid | 3.38e-15 | 15 |
organism substance | 3.38e-15 | 15 |
hematopoietic system | 2.25e-08 | 98 |
blood island | 2.25e-08 | 98 |
connective tissue | 1.22e-07 | 371 |
thymus | 2.27e-07 | 4 |
hemolymphoid system gland | 2.27e-07 | 4 |
thymic region | 2.27e-07 | 4 |
pharyngeal gland | 2.27e-07 | 4 |
thymus primordium | 2.27e-07 | 4 |
hemolymphoid system | 4.03e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.