FFCP PHASE1:Hg19::chr2:157189617..157189667,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4929|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7981|TSSclassifier=W|UniProt=F1D8N6,P43354,Q53EL4|association_with_transcript=-330bp_to_NM_006186,uc002tyx.3,uc002tyz.3,uc010zcf.1_5end|coexpression_cluster_id=C898|description=CAGE_peak_4_at_NR4A2_5end|id=chr2:157189617..157189667,-|ontology_enrichment_celltype=CL:0002057!2.89e-30!42;CL:0000738!5.32e-30!140;CL:0000860!1.32e-29!45;CL:0000766!1.47e-24!76;CL:0002031!4.29e-22!124;CL:0000037!2.05e-21!172;CL:0000566!2.05e-21!172;CL:0002087!3.62e-21!119;CL:0000988!1.38e-20!182;CL:0000557!1.06e-19!71;CL:0002032!1.02e-18!165;CL:0000837!1.02e-18!165;CL:0002009!4.67e-18!65;CL:0000839!8.75e-18!70;CL:0002194!1.13e-16!63;CL:0000576!1.13e-16!63;CL:0000040!1.13e-16!63;CL:0000559!1.13e-16!63;CL:0000763!1.38e-14!112;CL:0000049!1.38e-14!112;CL:0002393!3.18e-08!9;CL:0002397!3.18e-08!9;CL:0000094!4.00e-08!8;CL:0000624!4.63e-07!6|ontology_enrichment_celltype_v019=CL:0000860;1.16e-23;33!CL:0002057;1.16e-23;33!CL:0000766;3.31e-19;69!CL:0000576;1.01e-17;48!CL:0000094;2.08e-17;8!CL:0000473;1.37e-16;39!CL:0000234;1.37e-16;39!CL:0000081;2.22e-15;11!CL:0000624;6.48e-15;6!CL:0002393;5.74e-14;6!CL:0002397;5.74e-14;6!CL:0002087;1.43e-11;104!CL:0000791;9.46e-10;18!CL:0000789;9.46e-10;18!CL:0002419;9.46e-10;18!CL:0000738;1.03e-09;136!CL:0000226;1.80e-08;3!CL:0000842;1.80e-08;3!CL:0000623;2.03e-08;3!CL:0000775;4.03e-08;3!CL:0000084;7.19e-08;25!CL:0000898;8.77e-08;3!CL:0000767;3.10e-07;3!CL:0000763;3.20e-07;100!CL:0000988;8.59e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,3.28e-48,136;CL:0000766,6.09e-38,72;CL:0000037,5.78e-36,168;CL:0000988,9.43e-35,177;CL:0002031,1.28e-34,120;CL:0002032,2.95e-33,161;CL:0000837,2.95e-33,161;CL:0002087,4.23e-33,115;CL:0000860,6.40e-33,42;CL:0002057,6.40e-33,42;CL:0000557,2.90e-28,67;CL:0000473,8.29e-28,48;CL:0000234,8.29e-28,48;CL:0002009,3.37e-25,61;CL:0000839,7.35e-25,66;CL:0000763,1.15e-24,108;CL:0000049,1.15e-24,108;CL:0002194,2.31e-22,59;CL:0000576,2.31e-22,59;CL:0000040,2.31e-22,59;CL:0000559,2.31e-22,59;CL:0000094,1.51e-17,8;CL:0000081,1.51e-15,11;CL:0000624,5.76e-15,6;CL:0000134,4.15e-10,354;CL:0000791,8.87e-10,18;CL:0000789,8.87e-10,18;CL:0002420,8.87e-10,18;CL:0002419,8.87e-10,18;CL:0000790,8.87e-10,18;CL:0002320,1.26e-09,361;CL:0002393,4.10e-09,9;CL:0002397,4.10e-09,9;CL:0000226,1.75e-08,3;CL:0000842,1.75e-08,3;CL:0000623,1.98e-08,3;CL:0000825,1.98e-08,3;CL:0000838,2.10e-08,52;CL:0000542,3.61e-08,53;CL:0000051,3.61e-08,53;CL:0000775,3.80e-08,3;CL:0000219,6.08e-08,386;CL:0000084,6.50e-08,25;CL:0000827,6.50e-08,25;CL:0000898,7.91e-08,3;CL:0000767,2.65e-07,3|ontology_enrichment_development_v019=CL:0002057;6.23e-24;42!CL:0000790;9.46e-10;18|ontology_enrichment_disease=DOID:305!5.22e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.43e-19!102;UBERON:0003061!5.43e-19!102;UBERON:0002371!3.01e-17!80;UBERON:0002193!5.98e-16!112;UBERON:0001474!9.82e-15!86;UBERON:0004765!4.93e-11!101;UBERON:0001434!4.93e-11!101;UBERON:0002405!3.92e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.18e-25,98;UBERON:0003061,3.18e-25,98;UBERON:0002371,7.66e-24,76;UBERON:0002193,6.75e-22,108;UBERON:0001474,1.95e-21,82;UBERON:0002405,3.22e-19,93;UBERON:0004765,9.77e-19,90;UBERON:0001434,5.57e-16,100;UBERON:0002384,5.72e-09,371;UBERON:0003081,1.22e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,2.75354993794233,1.53531759238885,7.43117391917165,0,0,0,0,0,0.587200878669695,8.86392653651004,16.0435557976113,17.577880527984,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,3.48643555358527,6.16751832032739,3.71647645074124,3.16461631554365,3.33008918487831,1.89185783910868,16.5477926753577,22.5919639254339,23.0225027210381,2.44715041405386,0.818718450173537,0.449446968890169,8.57034898638527,4.49300637906531,11.5080682643827,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,7.28621129244555,4.17186334736161,2.38907729175628,0.605399502633369,0.368277635987565,1.26584954976354,2.95757400836718,3.61427309940574,2.93522103711726,3.14520167210186,2.85336096398862,2.4108838004562,0.570025487482497,0.59675003159727,0.91332076882317,0,0,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,36.4296300230047,45.2172635815623,45.4905141469022,0,0.560508562981536,0,28.5229166665058,24.3666672904482,23.2329693869445,0.167186495390678,4.88883399950386,2.36723902867367,17.534405556712,0.334231370655521,9.13278313171995,4.87374568083967,2.43723477388514,0.512365278902701,1.30059347559878,0.164437904603676,1.10540007114339,0.579606171470105,8.45233410023744,6.95606153033254,11.4989076185474,0,3.83220493601921,5.15441168223945,5.06039384039006,0,0,0,0,0,0,0,0,10.6851573909108,11.7673686144743,10.4273570795615,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.065489537748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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |||
|TSSclassifier=W | |||
|UniProt=F1D8N6,P43354,Q53EL4 | |||
|association_with_transcript=-330bp_to_NM_006186,uc002tyx.3,uc002tyz.3,uc010zcf.1_5end | |||
|coexpression_cluster_id=C898 | |||
|description=CAGE_peak_4_at_NR4A2_5end | |||
|id=chr2:157189617..157189667,- | |||
|ontology_enrichment_celltype=CL:0002057!2.89e-30!42;CL:0000738!5.32e-30!140;CL:0000860!1.32e-29!45;CL:0000766!1.47e-24!76;CL:0002031!4.29e-22!124;CL:0000037!2.05e-21!172;CL:0000566!2.05e-21!172;CL:0002087!3.62e-21!119;CL:0000988!1.38e-20!182;CL:0000557!1.06e-19!71;CL:0002032!1.02e-18!165;CL:0000837!1.02e-18!165;CL:0002009!4.67e-18!65;CL:0000839!8.75e-18!70;CL:0002194!1.13e-16!63;CL:0000576!1.13e-16!63;CL:0000040!1.13e-16!63;CL:0000559!1.13e-16!63;CL:0000763!1.38e-14!112;CL:0000049!1.38e-14!112;CL:0002393!3.18e-08!9;CL:0002397!3.18e-08!9;CL:0000094!4.00e-08!8;CL:0000624!4.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-23;33!CL:0002057;1.16e-23;33!CL:0000766;3.31e-19;69!CL:0000576;1.01e-17;48!CL:0000094;2.08e-17;8!CL:0000473;1.37e-16;39!CL:0000234;1.37e-16;39!CL:0000081;2.22e-15;11!CL:0000624;6.48e-15;6!CL:0002393;5.74e-14;6!CL:0002397;5.74e-14;6!CL:0002087;1.43e-11;104!CL:0000791;9.46e-10;18!CL:0000789;9.46e-10;18!CL:0002419;9.46e-10;18!CL:0000738;1.03e-09;136!CL:0000226;1.80e-08;3!CL:0000842;1.80e-08;3!CL:0000623;2.03e-08;3!CL:0000775;4.03e-08;3!CL:0000084;7.19e-08;25!CL:0000898;8.77e-08;3!CL:0000767;3.10e-07;3!CL:0000763;3.20e-07;100!CL:0000988;8.59e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.28e-48,136;CL:0000766,6.09e-38,72;CL:0000037,5.78e-36,168;CL:0000988,9.43e-35,177;CL:0002031,1.28e-34,120;CL:0002032,2.95e-33,161;CL:0000837,2.95e-33,161;CL:0002087,4.23e-33,115;CL:0000860,6.40e-33,42;CL:0002057,6.40e-33,42;CL:0000557,2.90e-28,67;CL:0000473,8.29e-28,48;CL:0000234,8.29e-28,48;CL:0002009,3.37e-25,61;CL:0000839,7.35e-25,66;CL:0000763,1.15e-24,108;CL:0000049,1.15e-24,108;CL:0002194,2.31e-22,59;CL:0000576,2.31e-22,59;CL:0000040,2.31e-22,59;CL:0000559,2.31e-22,59;CL:0000094,1.51e-17,8;CL:0000081,1.51e-15,11;CL:0000624,5.76e-15,6;CL:0000134,4.15e-10,354;CL:0000791,8.87e-10,18;CL:0000789,8.87e-10,18;CL:0002420,8.87e-10,18;CL:0002419,8.87e-10,18;CL:0000790,8.87e-10,18;CL:0002320,1.26e-09,361;CL:0002393,4.10e-09,9;CL:0002397,4.10e-09,9;CL:0000226,1.75e-08,3;CL:0000842,1.75e-08,3;CL:0000623,1.98e-08,3;CL:0000825,1.98e-08,3;CL:0000838,2.10e-08,52;CL:0000542,3.61e-08,53;CL:0000051,3.61e-08,53;CL:0000775,3.80e-08,3;CL:0000219,6.08e-08,386;CL:0000084,6.50e-08,25;CL:0000827,6.50e-08,25;CL:0000898,7.91e-08,3;CL:0000767,2.65e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.23e-24;42!CL:0000790;9.46e-10;18 | |||
|ontology_enrichment_disease=DOID:305!5.22e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.43e-19!102;UBERON:0003061!5.43e-19!102;UBERON:0002371!3.01e-17!80;UBERON:0002193!5.98e-16!112;UBERON:0001474!9.82e-15!86;UBERON:0004765!4.93e-11!101;UBERON:0001434!4.93e-11!101;UBERON:0002405!3.92e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.18e-25,98;UBERON:0003061,3.18e-25,98;UBERON:0002371,7.66e-24,76;UBERON:0002193,6.75e-22,108;UBERON:0001474,1.95e-21,82;UBERON:0002405,3.22e-19,93;UBERON:0004765,9.77e-19,90;UBERON:0001434,5.57e-16,100;UBERON:0002384,5.72e-09,371;UBERON:0003081,1.22e-07,203 | |||
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| |||
|short_description=p4@NR4A2 | |||
}} |
Revision as of 14:11, 12 September 2013
Short description: | p4@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NR4A2_5end |
Coexpression cluster: | C898_CD14_Mast_Basophils_Natural_CD19_immature_CD8 |
Association with transcript: | -330bp_to_NM_006186, uc002tyx.3, uc002tyz.3, uc010zcf.1_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | F1D8N6P43354Q53EL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.18e-25 | 98 |
blood island | 3.18e-25 | 98 |
bone marrow | 7.66e-24 | 76 |
hemolymphoid system | 6.75e-22 | 108 |
bone element | 1.95e-21 | 82 |
immune system | 3.22e-19 | 93 |
skeletal element | 9.77e-19 | 90 |
skeletal system | 5.57e-16 | 100 |
connective tissue | 5.72e-09 | 371 |
lateral plate mesoderm | 1.22e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.