FFCP PHASE1:Hg19::chr2:161110328..161110372,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3694|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6161|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000498478_5end|description=CAGE_peak_5_at_ITGB6_5end|id=chr2:161110328..161110372,-|ontology_enrichment_celltype=CL:0000188!1.53e-18!9;CL:1000497!4.71e-13!18;CL:0002518!4.71e-13!18;CL:1000449!6.98e-12!16;CL:1000507!6.13e-10!12;CL:1000494!6.13e-10!12;CL:0002681!6.32e-09!13;CL:0002584!6.32e-09!13;CL:0000594!1.42e-08!3;CL:0000680!7.31e-07!57;CL:0000056!7.31e-07!57;CL:0000355!7.31e-07!57|ontology_enrichment_celltype_v019=CL:0000188;3.47e-16;9!CL:0000515;1.28e-08;3!CL:0000680;5.40e-08;7|ontology_enrichment_celltype_v019_2=CL:0000188,3.25e-16,9|ontology_enrichment_development_v019=UBERON:0003104;2.82e-08;31!UBERON:0004874;1.44e-07;1!UBERON:0006242;5.84e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!9.21e-17!143;UBERON:0003104!1.71e-14!238;UBERON:0009142!1.71e-14!238;UBERON:0004876!5.14e-14!20;UBERON:0002113!8.05e-14!27;UBERON:0003918!8.05e-14!27;UBERON:0005095!8.05e-14!27;UBERON:0007687!8.05e-14!27;UBERON:0006555!9.67e-14!17;UBERON:0005103!9.67e-14!17;UBERON:0000083!9.67e-14!17;UBERON:0009201!9.67e-14!17;UBERON:0004819!9.67e-14!17;UBERON:0006553!9.67e-14!17;UBERON:0003074!9.67e-14!17;UBERON:0003060!9.67e-14!17;UBERON:0002100!2.60e-13!216;UBERON:0000080!7.39e-13!18;UBERON:0002120!7.39e-13!18;UBERON:0004875!7.39e-13!18;UBERON:0005721!7.39e-13!18;UBERON:0005754!7.39e-13!18;UBERON:0007297!7.39e-13!18;UBERON:0000058!5.91e-12!26;UBERON:0004211!6.98e-12!16;UBERON:0001285!6.98e-12!16;UBERON:0007684!6.98e-12!16;UBERON:0003220!6.98e-12!16;UBERON:0004208!6.98e-12!16;UBERON:0000489!3.56e-11!32;UBERON:0001134!4.01e-11!61;UBERON:0002036!4.01e-11!61;UBERON:0003082!4.01e-11!61;UBERON:0003887!1.02e-10!21;UBERON:0002385!1.28e-10!63;UBERON:0001015!1.28e-10!63;UBERON:0000383!1.28e-10!63;UBERON:0009773!6.13e-10!12;UBERON:0001231!6.13e-10!12;UBERON:0004810!6.13e-10!12;UBERON:0004290!4.35e-09!70;UBERON:0001225!6.32e-09!13;UBERON:0008987!6.32e-09!13;UBERON:0000914!9.83e-09!83;UBERON:0002329!9.83e-09!83;UBERON:0003077!9.83e-09!83;UBERON:0003059!9.83e-09!83;UBERON:0007282!9.83e-09!83;UBERON:0009618!9.83e-09!83;UBERON:0007285!9.83e-09!83;UBERON:0005172!1.42e-08!55;UBERON:0005173!1.42e-08!55;UBERON:0006554!1.52e-08!44;UBERON:0001008!2.77e-08!45;UBERON:0003103!4.31e-08!69;UBERON:0000481!8.39e-08!347;UBERON:0003064!1.01e-07!37;UBERON:0002417!2.28e-07!61;UBERON:0000916!2.28e-07!61;UBERON:0000341!3.88e-07!2;UBERON:0000486!4.21e-07!82;UBERON:0000490!4.38e-07!138;UBERON:0001851!4.69e-07!16;UBERON:0001630!5.03e-07!2;UBERON:0005090!5.03e-07!2|ontology_enrichment_uberon_v019=UBERON:0001134;8.86e-43;16!UBERON:0002036;8.86e-43;16!UBERON:0002385;1.03e-20;31!UBERON:0001015;1.03e-20;31!UBERON:0000383;1.03e-20;31!UBERON:0000341;1.47e-13;2!UBERON:0005090;2.33e-13;2!UBERON:0001630;2.33e-13;2!UBERON:0001723;2.18e-09;3!UBERON:0001033;2.18e-09;3!UBERON:0002426;1.12e-07;1!UBERON:0003831;1.12e-07;1!UBERON:0003898;1.12e-07;1!UBERON:0004830;1.12e-07;1!UBERON:0003830;1.12e-07;1!UBERON:0005175;1.12e-07;1!UBERON:0001774;1.12e-07;1!UBERON:0001103;1.12e-07;1!UBERON:0000989;1.44e-07;1!UBERON:0008811;1.44e-07;1!UBERON:0001389;2.29e-07;1!UBERON:0000026;2.29e-07;1!UBERON:0008784;2.29e-07;1!UBERON:0006058;2.29e-07;1!UBERON:0003663;2.29e-07;1!UBERON:0004256;2.29e-07;1!UBERON:0004708;2.29e-07;1!UBERON:0002101;2.29e-07;1!UBERON:0004709;2.29e-07;1!UBERON:0002529;2.29e-07;1!UBERON:0010538;2.29e-07;1!UBERON:0003661;2.29e-07;1!UBERON:0010890;2.29e-07;1!UBERON:0002471;2.29e-07;1!UBERON:0001383;2.29e-07;1!UBERON:0010758;2.29e-07;1!UBERON:0010707;2.29e-07;1!UBERON:0000978;2.29e-07;1!UBERON:0002103;2.29e-07;1!UBERON:0001665;2.29e-07;1!UBERON:0003823;2.29e-07;1!UBERON:0000154;2.29e-07;1!UBERON:0010709;2.29e-07;1!UBERON:0007029;2.76e-07;1!UBERON:0002372;5.84e-07;1!UBERON:0001961;5.84e-07;1!UBERON:0001744;5.84e-07;1!UBERON:0001042;5.84e-07;1!UBERON:0001735;5.84e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.47e-13,2;UBERON:0005090,2.55e-13,2;UBERON:0001630,2.55e-13,2;UBERON:0001134,1.59e-09,62;UBERON:0002036,1.59e-09,62;UBERON:0003082,1.59e-09,62;UBERON:0001723,2.22e-09,3;UBERON:0001033,2.22e-09,3;UBERON:0010056,2.22e-09,3;UBERON:0003104,2.38e-09,160;UBERON:0009142,2.38e-09,160;UBERON:0002385,3.64e-09,64;UBERON:0001015,3.64e-09,64;UBERON:0000383,3.64e-09,64;UBERON:0007503,1.38e-08,78;UBERON:0002329,4.57e-08,71;UBERON:0003059,4.57e-08,71;UBERON:0007282,4.57e-08,71;UBERON:0004290,4.57e-08,71;UBERON:0009618,4.57e-08,71;UBERON:0003077,6.31e-08,72;UBERON:0007285,6.31e-08,72;UBERON:0005256,8.45e-08,122;UBERON:0007524,8.62e-08,73;UBERON:0002100,1.08e-07,199;UBERON:0002426,1.12e-07,1;UBERON:0003831,1.12e-07,1;UBERON:0003898,1.12e-07,1;UBERON:0004830,1.12e-07,1;UBERON:0003830,1.12e-07,1;UBERON:0005175,1.12e-07,1;UBERON:0001774,1.12e-07,1;UBERON:0001103,1.12e-07,1;UBERON:0010084,1.12e-07,1;UBERON:00009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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3694 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000498478_5end | |||
|description=CAGE_peak_5_at_ITGB6_5end | |||
|id=chr2:161110328..161110372,- | |||
|ontology_enrichment_celltype=CL:0000188!1.53e-18!9;CL:1000497!4.71e-13!18;CL:0002518!4.71e-13!18;CL:1000449!6.98e-12!16;CL:1000507!6.13e-10!12;CL:1000494!6.13e-10!12;CL:0002681!6.32e-09!13;CL:0002584!6.32e-09!13;CL:0000594!1.42e-08!3;CL:0000680!7.31e-07!57;CL:0000056!7.31e-07!57;CL:0000355!7.31e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.47e-16;9!CL:0000515;1.28e-08;3!CL:0000680;5.40e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.25e-16,9 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.82e-08;31!UBERON:0004874;1.44e-07;1!UBERON:0006242;5.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@ITGB6 | |||
}} |
Revision as of 14:19, 12 September 2013
Short description: | p5@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ITGB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498478_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.25e-16 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.