FFCP PHASE1:Hg19::chr2:174830043..174830071,-: Difference between revisions
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{{FFCP | 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5160631,2.05417695252545,1.16241425368125,0.869291361512897,0,0.62164849248911,0.6828739083758,2.07377898544228,0.430227358820278,0.473328002922261,0.596493833314104,1.27016115057279,0.9164274741762,0.62041277132864,0.955538938977433,1.4541206133713,1.07965256976767,1.70685094975177,0,2.05325613712494,2.3196288626764,0.971421986118279,3.74303141539369,3.97901550322736,2.14056163399623,2.03302947670128,3.18827498561744,1.50962843566674,1.23478652972711,2.84127428655144,1.41095188908457,1.22574160876953,1.17838273550813,1.76677620403451,3.86160320425212,1.6906229103336,0.339854229375634,3.38342104727473,1.86927875123374,1.79894080664872,1.78553938605658,0.705789743431384,1.7653100671617,0.730336388246517,1.37618785021362,1.86341458096887,1.26217249754548,0.747906392100062,2.18175345170189,1.5870805215462,1.85997509083376,3.23522940041993,0.432626562123789,1.64016352285603,1.09265571963696,1.64708051314868,1.32585478664576,4.27547848424897,0.918948995348449,2.50707539292375,2.8795905322931,2.41167717140561,0,2.37895890482359,2.55880778281177,1.90451545170992,4.13369022950439,3.28995985768047,0.560659312903067,2.10035622317944,4.64869534603904,0.870866991587845,2.05339980651169,1.95320953742304,1.72133292942423,1.66330178273007,0.732629417498771,0.533636729388577,0,0.898252021065869,2.34640942403454,1.4668973301944,1.62758471326295,3.32878387092756,5.43439242695771,1.9234109538194|short_description=p6@SP3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11208 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002uig.2,uc010zel.1_5end | |||
|description=CAGE_peak_6_at_SP3_5end | |||
|id=chr2:174830043..174830071,- | |||
|ontology_enrichment_celltype=CL:0002087!3.18e-15!119;CL:0000037!1.63e-14!172;CL:0000566!1.63e-14!172;CL:0002032!1.76e-14!165;CL:0000837!1.76e-14!165;CL:0000738!1.17e-13!140;CL:0002031!2.61e-13!124;CL:0000988!8.12e-13!182;CL:0000860!5.15e-10!45;CL:0002057!6.20e-10!42;CL:0000766!4.97e-09!76;CL:0002194!1.15e-08!63;CL:0000576!1.15e-08!63;CL:0000040!1.15e-08!63;CL:0000559!1.15e-08!63;CL:0000763!1.54e-08!112;CL:0000049!1.54e-08!112;CL:0002009!3.11e-08!65;CL:0000839!3.96e-08!70;CL:0000557!2.64e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-11;33!CL:0002057;2.87e-11;33!CL:0000473;1.21e-08;39!CL:0000234;1.21e-08;39!CL:0000576;2.32e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.01e-14,115;CL:0000037,9.77e-14,168;CL:0002032,1.48e-13,161;CL:0000837,1.48e-13,161;CL:0000738,1.54e-13,136;CL:0002031,7.30e-13,120;CL:0000988,1.08e-12,177;CL:0000860,1.35e-09,42;CL:0002057,1.35e-09,42;CL:0000766,9.87e-09,72;CL:0000473,2.07e-08,48;CL:0000234,2.07e-08,48;CL:0002194,3.18e-08,59;CL:0000576,3.18e-08,59;CL:0000040,3.18e-08,59;CL:0000559,3.18e-08,59;CL:0002009,6.75e-08,61;CL:0000763,8.67e-08,108;CL:0000049,8.67e-08,108;CL:0000839,1.06e-07,66;CL:0000557,6.01e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-16!115;UBERON:0002390!7.93e-11!102;UBERON:0003061!7.93e-11!102;UBERON:0002193!2.10e-09!112;UBERON:0001049!7.54e-08!57;UBERON:0005068!7.54e-08!57;UBERON:0006241!7.54e-08!57;UBERON:0007135!7.54e-08!57;UBERON:0000178!1.17e-07!15;UBERON:0000179!1.17e-07!15;UBERON:0000463!1.17e-07!15;UBERON:0001017!4.56e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-07;15!UBERON:0000179;1.65e-07;15!UBERON:0000463;1.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.84e-16,114;UBERON:0002390,1.45e-11,98;UBERON:0003061,1.45e-11,98;UBERON:0002193,3.75e-10,108;UBERON:0000178,2.55e-08,15;UBERON:0000179,2.55e-08,15;UBERON:0000463,2.55e-08,15;UBERON:0001049,5.18e-08,56;UBERON:0005068,5.18e-08,56;UBERON:0006241,5.18e-08,56;UBERON:0007135,5.18e-08,56;UBERON:0000073,2.44e-07,53;UBERON:0002616,2.44e-07,53;UBERON:0001017,6.36e-07,81 | |||
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| |||
|short_description=p6@SP3 | |||
}} |
Revision as of 14:44, 12 September 2013
Short description: | p6@SP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002uig.2, uc010zel.1_5end |
EntrezGene: | SP3 |
HGNC: | 11208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.01e-14 | 115 |
hematopoietic stem cell | 9.77e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.48e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-13 | 161 |
leukocyte | 1.54e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 7.30e-13 | 120 |
hematopoietic cell | 1.08e-12 | 177 |
classical monocyte | 1.35e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-09 | 42 |
myeloid leukocyte | 9.87e-09 | 72 |
defensive cell | 2.07e-08 | 48 |
phagocyte | 2.07e-08 | 48 |
monopoietic cell | 3.18e-08 | 59 |
monocyte | 3.18e-08 | 59 |
monoblast | 3.18e-08 | 59 |
promonocyte | 3.18e-08 | 59 |
macrophage dendritic cell progenitor | 6.75e-08 | 61 |
myeloid cell | 8.67e-08 | 108 |
common myeloid progenitor | 8.67e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.06e-07 | 66 |
granulocyte monocyte progenitor cell | 6.01e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.84e-16 | 114 |
hematopoietic system | 1.45e-11 | 98 |
blood island | 1.45e-11 | 98 |
hemolymphoid system | 3.75e-10 | 108 |
blood | 2.55e-08 | 15 |
haemolymphatic fluid | 2.55e-08 | 15 |
organism substance | 2.55e-08 | 15 |
neural tube | 5.18e-08 | 56 |
neural rod | 5.18e-08 | 56 |
future spinal cord | 5.18e-08 | 56 |
neural keel | 5.18e-08 | 56 |
regional part of nervous system | 2.44e-07 | 53 |
regional part of brain | 2.44e-07 | 53 |
central nervous system | 6.36e-07 | 81 |
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