FFCP PHASE1:Hg19::chr2:18741705..18741710,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57665|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19979|TSSclassifier=S|UniProt=|association_with_transcript=127bp_to_AB527206,AM393225_5end|description=CAGE_peak_6_at_RDH14_5end|id=chr2:18741705..18741710,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002592;9.90e-11;3|ontology_enrichment_celltype_v019_2=CL:0002592,1.09e-10,3|ontology_enrichment_development_v019=UBERON:0004140;8.64e-30;1!UBERON:0010226;2.37e-29;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005090;8.46e-57;2!UBERON:0001630;8.46e-57;2!UBERON:0002084;2.37e-29;1!UBERON:0001389;2.37e-29;1!UBERON:0000026;2.37e-29;1!UBERON:0008784;2.37e-29;1!UBERON:0006058;2.37e-29;1!UBERON:0002426;2.37e-29;1!UBERON:0003831;2.37e-29;1!UBERON:0003898;2.37e-29;1!UBERON:0004830;2.37e-29;1!UBERON:0003663;2.37e-29;1!UBERON:0004256;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0004708;2.37e-29;1!UBERON:0002101;2.37e-29;1!UBERON:0004709;2.37e-29;1!UBERON:0003830;2.37e-29;1!UBERON:0005175;2.37e-29;1!UBERON:0002529;2.37e-29;1!UBERON:0010538;2.37e-29;1!UBERON:0003661;2.37e-29;1!UBERON:0010890;2.37e-29;1!UBERON:0002471;2.37e-29;1!UBERON:0001774;2.37e-29;1!UBERON:0001383;2.37e-29;1!UBERON:0010758;2.37e-29;1!UBERON:0010707;2.37e-29;1!UBERON:0001103;2.37e-29;1!UBERON:0000978;2.37e-29;1!UBERON:0002103;2.37e-29;1!UBERON:0001665;2.37e-29;1!UBERON:0003823;2.37e-29;1!UBERON:0000154;2.37e-29;1!UBERON:0010709;2.37e-29;1!UBERON:0000948;2.59e-12;22!UBERON:0007100;6.36e-11;25!UBERON:0003498;9.90e-11;3!UBERON:0004151;9.90e-11;3!UBERON:0005985;9.90e-11;3!UBERON:0001621;9.90e-11;3!UBERON:0001134;4.91e-08;16!UBERON:0002036;4.91e-08;16|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.36e-57,2;UBERON:0001630,6.36e-57,2;UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0005418,1.78e-29,1;UBERON:0001389,1.78e-29,1;UBERON:0000026,1.78e-29,1;UBERON:0008784,1.78e-29,1;UBERON:0006058,1.78e-29,1;UBERON:0003663,1.78e-29,1;UBERON:0004256,1.78e-29,1;UBERON:0004708,1.78e-29,1;UBERON:0002101,1.78e-29,1;UBERON:0004709,1.78e-29,1;UBERON:0002529,1.78e-29,1;UBERON:0010538,1.78e-29,1;UBERON:0003661,1.78e-29,1;UBERON:0010890,1.78e-29,1;UBERON:0002471,1.78e-29,1;UBERON:0001383,1.78e-29,1;UBERON:0004357,1.78e-29,1;UBERON:0004347,1.78e-29,1;UBERON:0005420,1.78e-29,1;UBERON:0005732,1.78e-29,1;UBERON:0010758,1.78e-29,1;UBERON:0010707,1.78e-29,1;UBERON:0000978,1.78e-29,1;UBERON:0002103,1.78e-29,1;UBERON:0001665,1.78e-29,1;UBERON:0003823,1.78e-29,1;UBERON:0000154,1.78e-29,1;UBERON:0010709,1.78e-29,1;UBERON:0005733,1.78e-29,1;UBERON:0005730,1.78e-29,1;UBERON:0002426,2.37e-29,1;UBERON:0003831,2.37e-29,1;UBERON:0003898,2.37e-29,1;UBERON:0004830,2.37e-29,1;UBERON:0003830,2.37e-29,1;UBERON:0005175,2.37e-29,1;UBERON:0001774,2.37e-29,1;UBERON:0001103,2.37e-29,1;UBERON:0010084,2.37e-29,1;UBERON:0000948,2.35e-11,24;UBERON:0005498,2.35e-11,24;UBERON:0004140,2.35e-11,24;UBERON:0009881,2.35e-11,24;UBERON:0004141,2.35e-11,24;UBERON:0003084,2.35e-11,24;UBERON:0007005,2.35e-11,24;UBERON:0004139,2.35e-11,24;UBERON:0004291,2.35e-11,24;UBERON:0004151,8.17e-11,3;UBERON:0001621,1.09e-10,3;UBERON:0007100,3.58e-10,27;UBERON:0003103,4.00e-07,68;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.383587685530591,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.427114777637135,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0.504641701751257,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.87192013766656,0.07333828582095,0.129271715757778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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19979 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=127bp_to_AB527206,AM393225_5end | |||
|description=CAGE_peak_6_at_RDH14_5end | |||
|id=chr2:18741705..18741710,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002592;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.64e-30;1!UBERON:0010226;2.37e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;8.46e-57;2!UBERON:0001630;8.46e-57;2!UBERON:0002084;2.37e-29;1!UBERON:0001389;2.37e-29;1!UBERON:0000026;2.37e-29;1!UBERON:0008784;2.37e-29;1!UBERON:0006058;2.37e-29;1!UBERON:0002426;2.37e-29;1!UBERON:0003831;2.37e-29;1!UBERON:0003898;2.37e-29;1!UBERON:0004830;2.37e-29;1!UBERON:0003663;2.37e-29;1!UBERON:0004256;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0004708;2.37e-29;1!UBERON:0002101;2.37e-29;1!UBERON:0004709;2.37e-29;1!UBERON:0003830;2.37e-29;1!UBERON:0005175;2.37e-29;1!UBERON:0002529;2.37e-29;1!UBERON:0010538;2.37e-29;1!UBERON:0003661;2.37e-29;1!UBERON:0010890;2.37e-29;1!UBERON:0002471;2.37e-29;1!UBERON:0001774;2.37e-29;1!UBERON:0001383;2.37e-29;1!UBERON:0010758;2.37e-29;1!UBERON:0010707;2.37e-29;1!UBERON:0001103;2.37e-29;1!UBERON:0000978;2.37e-29;1!UBERON:0002103;2.37e-29;1!UBERON:0001665;2.37e-29;1!UBERON:0003823;2.37e-29;1!UBERON:0000154;2.37e-29;1!UBERON:0010709;2.37e-29;1!UBERON:0000948;2.59e-12;22!UBERON:0007100;6.36e-11;25!UBERON:0003498;9.90e-11;3!UBERON:0004151;9.90e-11;3!UBERON:0005985;9.90e-11;3!UBERON:0001621;9.90e-11;3!UBERON:0001134;4.91e-08;16!UBERON:0002036;4.91e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.36e-57,2;UBERON:0001630,6.36e-57,2;UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0005418,1.78e-29,1;UBERON:0001389,1.78e-29,1;UBERON:0000026,1.78e-29,1;UBERON:0008784,1.78e-29,1;UBERON:0006058,1.78e-29,1;UBERON:0003663,1.78e-29,1;UBERON:0004256,1.78e-29,1;UBERON:0004708,1.78e-29,1;UBERON:0002101,1.78e-29,1;UBERON:0004709,1.78e-29,1;UBERON:0002529,1.78e-29,1;UBERON:0010538,1.78e-29,1;UBERON:0003661,1.78e-29,1;UBERON:0010890,1.78e-29,1;UBERON:0002471,1.78e-29,1;UBERON:0001383,1.78e-29,1;UBERON:0004357,1.78e-29,1;UBERON:0004347,1.78e-29,1;UBERON:0005420,1.78e-29,1;UBERON:0005732,1.78e-29,1;UBERON:0010758,1.78e-29,1;UBERON:0010707,1.78e-29,1;UBERON:0000978,1.78e-29,1;UBERON:0002103,1.78e-29,1;UBERON:0001665,1.78e-29,1;UBERON:0003823,1.78e-29,1;UBERON:0000154,1.78e-29,1;UBERON:0010709,1.78e-29,1;UBERON:0005733,1.78e-29,1;UBERON:0005730,1.78e-29,1;UBERON:0002426,2.37e-29,1;UBERON:0003831,2.37e-29,1;UBERON:0003898,2.37e-29,1;UBERON:0004830,2.37e-29,1;UBERON:0003830,2.37e-29,1;UBERON:0005175,2.37e-29,1;UBERON:0001774,2.37e-29,1;UBERON:0001103,2.37e-29,1;UBERON:0010084,2.37e-29,1;UBERON:0000948,2.35e-11,24;UBERON:0005498,2.35e-11,24;UBERON:0004140,2.35e-11,24;UBERON:0009881,2.35e-11,24;UBERON:0004141,2.35e-11,24;UBERON:0003084,2.35e-11,24;UBERON:0007005,2.35e-11,24;UBERON:0004139,2.35e-11,24;UBERON:0004291,2.35e-11,24;UBERON:0004151,8.17e-11,3;UBERON:0001621,1.09e-10,3;UBERON:0007100,3.58e-10,27;UBERON:0003103,4.00e-07,68;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5 | |||
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| |||
|short_description=p6@RDH14 | |||
}} |
Revision as of 15:34, 12 September 2013
Short description: | p6@RDH14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RDH14_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_AB527206, AM393225_5end |
EntrezGene: | RDH14 |
HGNC: | 19979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.09e-10 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.