FFCP PHASE1:Mm9::chr11:118171948..118171959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=487|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118171948..118171959,-|id=chr11:118171948..118171959,-|ontology_enrichment_celltype=CL:0000055!2.82e-11!50;CL:0002319!1.76e-07!43;CL:0002453!2.04e-07!8;CL:0000221!4.65e-07!44;CL:0000133!4.65e-07!44;CL:0000107!7.87e-07!9;CL:0000333!9.94e-07!10;CL:0000095!9.94e-07!10;CL:0000243!9.94e-07!10;CL:0000123!9.94e-07!10;CL:0000125!9.94e-07!10;CL:0000030!9.94e-07!10;CL:0000339!9.94e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,1.38e-23,8;CL:0000333,1.02e-18,10;CL:0000095,1.02e-18,10;CL:0000243,1.02e-18,10;CL:0000123,1.02e-18,10;CL:0000125,1.02e-18,10;CL:0000030,1.02e-18,10;CL:0000339,1.02e-18,10;CL:0000128,1.75e-16,6;CL:0000126,1.75e-16,6;CL:0000127,1.75e-16,6;CL:0002194,5.75e-16,4;CL:0000766,5.75e-16,4;CL:0000234,5.75e-16,4;CL:0000576,5.75e-16,4;CL:0000235,5.75e-16,4;CL:0000864,5.75e-16,4;CL:0002009,5.75e-16,4;CL:0000040,5.75e-16,4;CL:0000559,5.75e-16,4;CL:0000192,1.80e-13,3;CL:0000359,1.80e-13,3;CL:0002539,1.80e-13,3;CL:0000514,1.80e-13,3;CL:0000680,2.16e-11,6;CL:0000187,2.16e-11,6;CL:0000056,2.16e-11,6;CL:0002321,4.37e-10,70;CL:0000222,8.92e-10,7;CL:0000473,3.47e-09,7;CL:0000557,3.47e-09,7;CL:0002605,3.48e-09,2;CL:0002604,3.48e-09,2;CL:0000878,7.21e-09,2;CL:0000129,7.21e-09,2;CL:0002476,9.43e-09,2;CL:0000708,1.61e-08,2;CL:0000219,1.88e-08,54;CL:0000355,1.30e-07,9;CL:0002319,1.75e-07,43;CL:0000221,2.82e-07,44;CL:0000133,2.82e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.20e-08!102;UBERON:0000924!2.20e-08!102;UBERON:0006601!2.20e-08!102;UBERON:0000073!3.17e-08!75;UBERON:0001016!3.17e-08!75;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0002410!7.87e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.25e-16,4;UBERON:0001637,1.25e-16,4;UBERON:0004573,1.25e-16,4;UBERON:0003509,1.25e-16,4;UBERON:0004571,1.25e-16,4;UBERON:0010191,1.25e-16,4;UBERON:0004572,1.25e-16,4;UBERON:0001135,1.80e-13,3;UBERON:0004237,1.80e-13,3;UBERON:0004695,1.80e-13,3;UBERON:0002111,1.80e-13,3;UBERON:0004178,1.80e-13,3;UBERON:0000055,2.46e-13,5;UBERON:0007500,2.46e-13,5;UBERON:0001981,2.46e-13,5;UBERON:0002049,2.46e-13,5;UBERON:0007798,2.46e-13,5;UBERON:0004537,2.46e-13,5;UBERON:0006965,2.46e-13,5;UBERON:0000013,6.65e-12,3;UBERON:0002204,5.91e-11,32;UBERON:0000383,5.57e-10,10;UBERON:0003210,1.61e-08,2;UBERON:0001134,1.30e-07,9;UBERON:0002036,1.30e-07,9;UBERON:0002385,1.30e-07,9;UBERON:0000486,1.30e-07,9;UBERON:0007503,1.30e-07,9;UBERON:0001015,1.30e-07,9;UBERON:0002329,1.30e-07,9;UBERON:0003082,1.30e-07,9;UBERON:0003059,1.30e-07,9;UBERON:0007282,1.30e-07,9;UBERON:0004290,1.30e-07,9;UBERON:0009618,1.30e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53228544712078,3.85232338634155,3.48738829107195,2.34717403304412,0.872100625521786,2.19686182734472,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,1.54701627683233,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,3.9554654502679,0.7104801149461,1.79760066311043,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0,0.883474163806454,0,0.191690942036473,0,0,0,0.46081959976873,0.263772575460388,0.457438218012048,0,0,0,0.763991238884051,0.589257170947335,0.427115042397309,0,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0,0,0.470354828542819,0,0.247194967734374,1.01219549843938,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0.521472960576829,1.27857728665165,0.20778804455956,0,0.611036183101898,0.373220911830279,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0.37898282354097,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.578596234326046,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0.117211686592203,0.327869890753351,1.00988370881749,0.94652465824877,0.780877488593277,0.646270193198397,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,0.321321316421807,0.283880170416537,0.534196811001766,0.651547837414304,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0.968786560175433,0.241251699712623,0.477489376012546,0.328281799490123,0,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.785267825952089,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,0.36630324853453,0,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0,0.463735671240843|short_description=p@chr11:118171948..118171959,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=487 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118171948..118171959,- | |||
|id=chr11:118171948..118171959,- | |||
|ontology_enrichment_celltype=CL:0000055!2.82e-11!50;CL:0002319!1.76e-07!43;CL:0002453!2.04e-07!8;CL:0000221!4.65e-07!44;CL:0000133!4.65e-07!44;CL:0000107!7.87e-07!9;CL:0000333!9.94e-07!10;CL:0000095!9.94e-07!10;CL:0000243!9.94e-07!10;CL:0000123!9.94e-07!10;CL:0000125!9.94e-07!10;CL:0000030!9.94e-07!10;CL:0000339!9.94e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.38e-23,8;CL:0000333,1.02e-18,10;CL:0000095,1.02e-18,10;CL:0000243,1.02e-18,10;CL:0000123,1.02e-18,10;CL:0000125,1.02e-18,10;CL:0000030,1.02e-18,10;CL:0000339,1.02e-18,10;CL:0000128,1.75e-16,6;CL:0000126,1.75e-16,6;CL:0000127,1.75e-16,6;CL:0002194,5.75e-16,4;CL:0000766,5.75e-16,4;CL:0000234,5.75e-16,4;CL:0000576,5.75e-16,4;CL:0000235,5.75e-16,4;CL:0000864,5.75e-16,4;CL:0002009,5.75e-16,4;CL:0000040,5.75e-16,4;CL:0000559,5.75e-16,4;CL:0000192,1.80e-13,3;CL:0000359,1.80e-13,3;CL:0002539,1.80e-13,3;CL:0000514,1.80e-13,3;CL:0000680,2.16e-11,6;CL:0000187,2.16e-11,6;CL:0000056,2.16e-11,6;CL:0002321,4.37e-10,70;CL:0000222,8.92e-10,7;CL:0000473,3.47e-09,7;CL:0000557,3.47e-09,7;CL:0002605,3.48e-09,2;CL:0002604,3.48e-09,2;CL:0000878,7.21e-09,2;CL:0000129,7.21e-09,2;CL:0002476,9.43e-09,2;CL:0000708,1.61e-08,2;CL:0000219,1.88e-08,54;CL:0000355,1.30e-07,9;CL:0002319,1.75e-07,43;CL:0000221,2.82e-07,44;CL:0000133,2.82e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.20e-08!102;UBERON:0000924!2.20e-08!102;UBERON:0006601!2.20e-08!102;UBERON:0000073!3.17e-08!75;UBERON:0001016!3.17e-08!75;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0002410!7.87e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.25e-16,4;UBERON:0001637,1.25e-16,4;UBERON:0004573,1.25e-16,4;UBERON:0003509,1.25e-16,4;UBERON:0004571,1.25e-16,4;UBERON:0010191,1.25e-16,4;UBERON:0004572,1.25e-16,4;UBERON:0001135,1.80e-13,3;UBERON:0004237,1.80e-13,3;UBERON:0004695,1.80e-13,3;UBERON:0002111,1.80e-13,3;UBERON:0004178,1.80e-13,3;UBERON:0000055,2.46e-13,5;UBERON:0007500,2.46e-13,5;UBERON:0001981,2.46e-13,5;UBERON:0002049,2.46e-13,5;UBERON:0007798,2.46e-13,5;UBERON:0004537,2.46e-13,5;UBERON:0006965,2.46e-13,5;UBERON:0000013,6.65e-12,3;UBERON:0002204,5.91e-11,32;UBERON:0000383,5.57e-10,10;UBERON:0003210,1.61e-08,2;UBERON:0001134,1.30e-07,9;UBERON:0002036,1.30e-07,9;UBERON:0002385,1.30e-07,9;UBERON:0000486,1.30e-07,9;UBERON:0007503,1.30e-07,9;UBERON:0001015,1.30e-07,9;UBERON:0002329,1.30e-07,9;UBERON:0003082,1.30e-07,9;UBERON:0003059,1.30e-07,9;UBERON:0007282,1.30e-07,9;UBERON:0004290,1.30e-07,9;UBERON:0009618,1.30e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53228544712078,3.85232338634155,3.48738829107195,2.34717403304412,0.872100625521786,2.19686182734472,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,1.54701627683233,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,3.9554654502679,0.7104801149461,1.79760066311043,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0,0.883474163806454,0,0.191690942036473,0,0,0,0.46081959976873,0.263772575460388,0.457438218012048,0,0,0,0.763991238884051,0.589257170947335,0.427115042397309,0,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0,0,0.470354828542819,0,0.247194967734374,1.01219549843938,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0.521472960576829,1.27857728665165,0.20778804455956,0,0.611036183101898,0.373220911830279,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0.37898282354097,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.578596234326046,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0.117211686592203,0.327869890753351,1.00988370881749,0.94652465824877,0.780877488593277,0.646270193198397,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,0.321321316421807,0.283880170416537,0.534196811001766,0.651547837414304,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0.968786560175433,0.241251699712623,0.477489376012546,0.328281799490123,0,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.785267825952089,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,0.36630324853453,0,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr11:118171948..118171959,- | |||
}} |
Revision as of 18:59, 12 September 2013
Short description: | p@chr11:118171948..118171959, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118171948..118171959, - |
Coexpression cluster: | MCL_coexpression_mm9:487 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aorta | 1.25e-16 | 4 |
artery | 1.25e-16 | 4 |
systemic artery | 1.25e-16 | 4 |
arterial blood vessel | 1.25e-16 | 4 |
systemic arterial system | 1.25e-16 | 4 |
aortic system | 1.25e-16 | 4 |
arterial system | 1.25e-16 | 4 |
smooth muscle tissue | 1.80e-13 | 3 |
blood vessel smooth muscle | 1.80e-13 | 3 |
arterial system smooth muscle | 1.80e-13 | 3 |
artery smooth muscle tissue | 1.80e-13 | 3 |
aorta smooth muscle tissue | 1.80e-13 | 3 |
vessel | 2.46e-13 | 5 |
epithelial tube open at both ends | 2.46e-13 | 5 |
blood vessel | 2.46e-13 | 5 |
vasculature | 2.46e-13 | 5 |
vascular system | 2.46e-13 | 5 |
blood vasculature | 2.46e-13 | 5 |
vascular cord | 2.46e-13 | 5 |
sympathetic nervous system | 6.65e-12 | 3 |
musculoskeletal system | 5.91e-11 | 32 |
musculature of body | 5.57e-10 | 10 |
blood-cerebrospinal fluid barrier | 1.61e-08 | 2 |
skeletal muscle tissue | 1.30e-07 | 9 |
striated muscle tissue | 1.30e-07 | 9 |
muscle tissue | 1.30e-07 | 9 |
multilaminar epithelium | 1.30e-07 | 9 |
epithelial vesicle | 1.30e-07 | 9 |
musculature | 1.30e-07 | 9 |
somite | 1.30e-07 | 9 |
myotome | 1.30e-07 | 9 |
presomitic mesoderm | 1.30e-07 | 9 |
presumptive segmental plate | 1.30e-07 | 9 |
dermomyotome | 1.30e-07 | 9 |
trunk paraxial mesoderm | 1.30e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.