FFCP PHASE1:Hg19::chr3:180694862..180694883,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:180694862..180694883,+|id=chr3:180694862..180694883,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;8.14e-10;6!CL:0000404;8.14e-10;6!CL:0000319;3.29e-07;1|ontology_enrichment_celltype_v019_2=CL:0000540,5.98e-10,6;CL:0000031,5.98e-10,6;CL:0000404,5.98e-10,6;CL:0000047,1.45e-07,8;CL:0000319,2.37e-07,1|ontology_enrichment_development_v019=CL:0000031;8.14e-10;6|ontology_enrichment_disease=DOID:162!6.95e-09!235;DOID:14566!1.23e-08!239|ontology_enrichment_disease_v019=DOID:0060085;3.29e-07;1!DOID:3165;3.29e-07;1!DOID:0060121;3.29e-07;1!DOID:2438;3.29e-07;1!DOID:3030;3.29e-07;1!DOID:4418;3.29e-07;1|ontology_enrichment_disease_v019_2=DOID:3030,2.37e-07,1;DOID:0060085,4.60e-07,1;DOID:3165,4.60e-07,1;DOID:0060121,4.60e-07,1;DOID:2438,4.60e-07,1;DOID:4418,4.60e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002148;9.54e-13;2!UBERON:0006331;9.54e-13;2!UBERON:0009662;9.54e-13;2!UBERON:0000988;8.65e-09;3!UBERON:0001000;3.29e-07;1!UBERON:0001389;3.29e-07;1!UBERON:0000026;3.29e-07;1!UBERON:0008784;3.29e-07;1!UBERON:0006058;3.29e-07;1!UBERON:0003663;3.29e-07;1!UBERON:0004256;3.29e-07;1!UBERON:0004708;3.29e-07;1!UBERON:0002101;3.29e-07;1!UBERON:0004709;3.29e-07;1!UBERON:0002529;3.29e-07;1!UBERON:0010538;3.29e-07;1!UBERON:0003661;3.29e-07;1!UBERON:0010890;3.29e-07;1!UBERON:0002471;3.29e-07;1!UBERON:0001383;3.29e-07;1!UBERON:0010758;3.29e-07;1!UBERON:0010707;3.29e-07;1!UBERON:0000978;3.29e-07;1!UBERON:0002103;3.29e-07;1!UBERON:0005352;3.29e-07;1!UBERON:0001665;3.29e-07;1!UBERON:0003823;3.29e-07;1!UBERON:0000154;3.29e-07;1!UBERON:0010709;3.29e-07;1!UBERON:0002784;8.56e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002148,5.95e-13,2;UBERON:0006331,5.95e-13,2;UBERON:0009662,5.95e-13,2;UBERON:0000988,6.33e-09,3;UBERON:0005418,3.41e-07,1;UBERON:0001389,3.41e-07,1;UBERON:0000026,3.41e-07,1;UBERON:0008784,3.41e-07,1;UBERON:0006058,3.41e-07,1;UBERON:0003663,3.41e-07,1;UBERON:0004256,3.41e-07,1;UBERON:0004708,3.41e-07,1;UBERON:0002101,3.41e-07,1;UBERON:0004709,3.41e-07,1;UBERON:0002529,3.41e-07,1;UBERON:0010538,3.41e-07,1;UBERON:0003661,3.41e-07,1;UBERON:0010890,3.41e-07,1;UBERON:0002471,3.41e-07,1;UBERON:0001383,3.41e-07,1;UBERON:0004357,3.41e-07,1;UBERON:0004347,3.41e-07,1;UBERON:0005420,3.41e-07,1;UBERON:0005732,3.41e-07,1;UBERON:0010758,3.41e-07,1;UBERON:0010707,3.41e-07,1;UBERON:0000978,3.41e-07,1;UBERON:0002103,3.41e-07,1;UBERON:0001665,3.41e-07,1;UBERON:0003823,3.41e-07,1;UBERON:0000154,3.41e-07,1;UBERON:0010709,3.41e-07,1;UBERON:0005733,3.41e-07,1;UBERON:0005730,3.41e-07,1;UBERON:0001016,4.21e-07,89;UBERON:0001000,5.19e-07,1;UBERON:0005352,5.19e-07,1;UBERON:0001017,8.96e-07,81;UBERON:0002784,9.11e-07,4|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,0,0,0.619412741790207,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0,0.512365278902701,0.130059347559878,0.657751618414705,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,1.30216690771284,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.511450247374121,0,0,0.579386075843295,0,0.486634870302636,0.756278537312543,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0.357198913136319,0.898117490504679,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.61417158655884,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.116193942869518,0.829288440122964,2.01856680700503,2.91981887260664,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.71181185733329,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:180694862..180694883,+ | |||
|id=chr3:180694862..180694883,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.14e-10;6!CL:0000404;8.14e-10;6!CL:0000319;3.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.98e-10,6;CL:0000031,5.98e-10,6;CL:0000404,5.98e-10,6;CL:0000047,1.45e-07,8;CL:0000319,2.37e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;8.14e-10;6 | |||
|ontology_enrichment_disease=DOID:162!6.95e-09!235;DOID:14566!1.23e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.29e-07;1!DOID:3165;3.29e-07;1!DOID:0060121;3.29e-07;1!DOID:2438;3.29e-07;1!DOID:3030;3.29e-07;1!DOID:4418;3.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.37e-07,1;DOID:0060085,4.60e-07,1;DOID:3165,4.60e-07,1;DOID:0060121,4.60e-07,1;DOID:2438,4.60e-07,1;DOID:4418,4.60e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;9.54e-13;2!UBERON:0006331;9.54e-13;2!UBERON:0009662;9.54e-13;2!UBERON:0000988;8.65e-09;3!UBERON:0001000;3.29e-07;1!UBERON:0001389;3.29e-07;1!UBERON:0000026;3.29e-07;1!UBERON:0008784;3.29e-07;1!UBERON:0006058;3.29e-07;1!UBERON:0003663;3.29e-07;1!UBERON:0004256;3.29e-07;1!UBERON:0004708;3.29e-07;1!UBERON:0002101;3.29e-07;1!UBERON:0004709;3.29e-07;1!UBERON:0002529;3.29e-07;1!UBERON:0010538;3.29e-07;1!UBERON:0003661;3.29e-07;1!UBERON:0010890;3.29e-07;1!UBERON:0002471;3.29e-07;1!UBERON:0001383;3.29e-07;1!UBERON:0010758;3.29e-07;1!UBERON:0010707;3.29e-07;1!UBERON:0000978;3.29e-07;1!UBERON:0002103;3.29e-07;1!UBERON:0005352;3.29e-07;1!UBERON:0001665;3.29e-07;1!UBERON:0003823;3.29e-07;1!UBERON:0000154;3.29e-07;1!UBERON:0010709;3.29e-07;1!UBERON:0002784;8.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,5.95e-13,2;UBERON:0006331,5.95e-13,2;UBERON:0009662,5.95e-13,2;UBERON:0000988,6.33e-09,3;UBERON:0005418,3.41e-07,1;UBERON:0001389,3.41e-07,1;UBERON:0000026,3.41e-07,1;UBERON:0008784,3.41e-07,1;UBERON:0006058,3.41e-07,1;UBERON:0003663,3.41e-07,1;UBERON:0004256,3.41e-07,1;UBERON:0004708,3.41e-07,1;UBERON:0002101,3.41e-07,1;UBERON:0004709,3.41e-07,1;UBERON:0002529,3.41e-07,1;UBERON:0010538,3.41e-07,1;UBERON:0003661,3.41e-07,1;UBERON:0010890,3.41e-07,1;UBERON:0002471,3.41e-07,1;UBERON:0001383,3.41e-07,1;UBERON:0004357,3.41e-07,1;UBERON:0004347,3.41e-07,1;UBERON:0005420,3.41e-07,1;UBERON:0005732,3.41e-07,1;UBERON:0010758,3.41e-07,1;UBERON:0010707,3.41e-07,1;UBERON:0000978,3.41e-07,1;UBERON:0002103,3.41e-07,1;UBERON:0001665,3.41e-07,1;UBERON:0003823,3.41e-07,1;UBERON:0000154,3.41e-07,1;UBERON:0010709,3.41e-07,1;UBERON:0005733,3.41e-07,1;UBERON:0005730,3.41e-07,1;UBERON:0001016,4.21e-07,89;UBERON:0001000,5.19e-07,1;UBERON:0005352,5.19e-07,1;UBERON:0001017,8.96e-07,81;UBERON:0002784,9.11e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,0,0,0.619412741790207,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0,0.512365278902701,0.130059347559878,0.657751618414705,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,1.30216690771284,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.511450247374121,0,0,0.579386075843295,0,0.486634870302636,0.756278537312543,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0.357198913136319,0.898117490504679,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.61417158655884,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.116193942869518,0.829288440122964,2.01856680700503,2.91981887260664,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.71181185733329,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0.462985512576611,1.33177906564219,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0.176096868026452,0,0,0,0.380987365753014,0,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0.299918973546171,1.2162378064119,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,0.623912584592421,0.535286966391485,0.946214490203608,0.35142424497814,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0.462629081407967,0,0,0,0.348631135379878,0,0,0.0920809889358963,0.114814448164607,0.910455840033585,0.262248829918848,0,0.231046011313244,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.618246069886334,0.27470839445503,0.247528499761764,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0,0,0.435050081742686,0.170453254832202,0.356128142586949,0,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.860468113224309,0.491245205065606,0,0.354761064070598,0.633322905892992,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0.689170200620878,0,0.764637207142375,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0.980160863924127,0.371606350251437,0.144269212976445,0.426851060090485,0.159426272728822,0.59873811429845,0.191505370132367,0.423347165447766,0.973865820823666,0.842391534340376,0.228234679033192,0,0,1.01575066680962,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0.485442086998054,0.445773537109913,1.70481688083848,0.47748896947538,0.296964680832639,0,0,0.984685914873589,0.667852230137435,0.329607748453519,1.26675244876796,0,0.276283915531148,0,0.102268682502155,0.492339221844278,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.174919999992391,0,0.341380344856499,0.254253650292766,0.709163045303809,0.689486746482929,0.874813840149763,0.520874984799877,0,0.482385754501632,0,0.442317039724898,0.886642856860642,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0.448788222048861,0.325942115766024,0.638002319463839,0.0915975934018623,0,0,0.470940769185074,0,0.225595660617181,0.392125068635479,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0.247127877893006,0.313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| |||
|short_description=p@chr3:180694862..180694883,+ | |||
}} |
Revision as of 22:53, 12 September 2013
Short description: | p@chr3:180694862..180694883, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:180694862..180694883, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.98e-10 | 6 |
neuroblast | 5.98e-10 | 6 |
electrically signaling cell | 5.98e-10 | 6 |
neuronal stem cell | 1.45e-07 | 8 |
mucus secreting cell | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.37e-07 | 1 |
organ system benign neoplasm | 4.60e-07 | 1 |
skin benign neoplasm | 4.60e-07 | 1 |
integumentary system benign neoplasm | 4.60e-07 | 1 |
dermis tumor | 4.60e-07 | 1 |
cutaneous fibrous histiocytoma | 4.60e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.