FFCP PHASE1:Mm9::chr12:82882108..82882163,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=338372|HGNC=|MCL_coexpression_id=3|UniProt=Q3U1V8|association_with_transcript=0bp_to_ENSMUST00000035987,NM_001174107,NM_177395,uc007oco.2,uc007ocp.2_5end|description=CAGE_peak_1_at_Map3k9_5end|id=chr12:82882108..82882163,-|ontology_enrichment_celltype=CL:0000117!1.26e-13!23;CL:0000337!1.26e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.60e-15,23;CL:0000337,8.60e-15,23;CL:0000540,3.90e-07,33;CL:0000047,3.90e-07,33;CL:0000031,3.90e-07,33;CL:0000404,3.90e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.03e-15!52;UBERON:0005068!2.03e-15!52;UBERON:0006241!2.03e-15!52;UBERON:0007135!2.03e-15!52;UBERON:0002020!7.39e-15!34;UBERON:0000955!8.40e-14!50;UBERON:0006238!8.40e-14!50;UBERON:0000033!9.86e-14!63;UBERON:0002616!1.30e-13!49;UBERON:0003080!2.86e-12!40;UBERON:0002780!5.38e-12!39;UBERON:0001890!5.38e-12!39;UBERON:0006240!5.38e-12!39;UBERON:0002346!6.07e-12!71;UBERON:0003075!6.07e-12!71;UBERON:0007284!6.07e-12!71;UBERON:0002791!6.67e-12!29;UBERON:0003528!6.67e-12!29;UBERON:0001893!6.67e-12!29;UBERON:0003056!9.22e-12!49;UBERON:0001017!4.36e-11!73;UBERON:0005743!4.36e-11!73;UBERON:0004121!1.23e-10!102;UBERON:0000924!1.23e-10!102;UBERON:0006601!1.23e-10!102;UBERON:0000073!4.03e-10!75;UBERON:0001016!4.03e-10!75;UBERON:0000956!4.01e-08!21;UBERON:0001869!4.01e-08!21;UBERON:0000203!4.01e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.23e-18,54;UBERON:0001049,5.07e-17,52;UBERON:0005068,5.07e-17,52;UBERON:0006241,5.07e-17,52;UBERON:0007135,5.07e-17,52;UBERON:0002020,2.64e-16,34;UBERON:0010371,3.16e-14,73;UBERON:0002346,5.68e-14,64;UBERON:0003075,5.68e-14,64;UBERON:0007284,5.68e-14,64;UBERON:0000955,1.25e-13,47;UBERON:0006238,1.25e-13,47;UBERON:0002616,2.00e-13,46;UBERON:0003080,3.21e-13,40;UBERON:0003528,4.68e-13,29;UBERON:0002791,4.68e-13,29;UBERON:0001893,4.68e-13,29;UBERON:0002780,6.43e-13,39;UBERON:0001890,6.43e-13,39;UBERON:0006240,6.43e-13,39;UBERON:0001017,1.57e-12,73;UBERON:0004121,2.73e-12,95;UBERON:0000924,2.73e-12,95;UBERON:0006601,2.73e-12,95;UBERON:0003056,4.61e-12,49;UBERON:0001016,1.53e-11,75;UBERON:0000956,6.66e-09,21;UBERON:0001869,6.66e-09,21;UBERON:0000203,6.66e-09,21;UBERON:0002619,6.93e-07,17|phase1_expression=1.76163731815273,5.23463111459042,0.909998478779072,3.62957053568196,5.00895729946347,3.3575854382378,1.40167584357315,0.387369970324729,0.563154888606667,0.234064526321993,0.34243593645101,0.239316476986009,0.342401459862411,0.174840804837995,0.666219523631325,0,0,2.36596624018678,1.37114433605739,2.12194825899015,2.29616883407888,0.198581902401771,0,0.799962113967033,1.83527424853736,4.59385571292016,2.15380998079537,2.15471232685889,0.760093677825496,2.01624103807945,2.21730510655305,0,0,0,3.75507105676657,3.65716219788683,1.42918549383658,37.6678467663217,24.2213956802378,21.4644735029257,32.3527318417058,39.6166381275899,27.1885797697446,0,0,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,3.18786951509699,2.17608642603403,0.336093799142464,0,0,0,11.7343547298567,10.0508286061686,8.23980824558033,0,0,1.7997994345628,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,5.70292867696627,6.75029691658453,4.20649922702764,5.71301968807607,5.74258206474195,5.14461356702807,4.40889166683887,4.5960939330501,3.30347642998166,7.40586560894089,6.45147439676223,5.67111037239834,9.05727671663856,8.33461392890816,7.2587579740359,3.93933827022176,4.12555268997387,8.54422897873636,7.83044244395066,9.69277118291563,0.227178579999552,0.151143120213571,1.15945795480671,0,0,0,0,0.448026887097336,0.561777680527007,0,0,0,1.54927761754349,0,0,0,6.061749148314,5.32055717497707,5.05524445014783,1.37020655662872,1.03575153458869,2.07818994690755,1.38788261412909,0.304465478312141,0.922461989024234,1.20578112442098,1.05829836422134,0.502666365318702,1.97755974187499,0.578397427679647,5.30766331169925,0.323533699894818,0.662524555381181,0.484875253135222,1.86391761218122,3.22058876712702,5.23616767033638,3.0654846625031,0.599075622529601,0,0.254140454146129,2.84602214869163,2.28750301409313,7.28795242254614,4.51943232499919,6.90431734791892,3.32460871295296,5.02947915510049,0.611036183101898,0.995255764880744,0.505445516867349,1.47309299120532,0.650602214813519,0.919608417733892,1.44049703844279,2.10986744970001,2.65342346690179,2.0498195245576,1.87403449119458,1.29351685369508,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0,1.0447564995665,1.85203922767149,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,3.15434922846191,4.93942139420565,2.64335026387038,1.58670339998127,1.06644125267617,0.232236671860439,1.80414445850931,1.61346819698674,3.55804870151792,2.85338439168839,1.42358718463353,1.31759163779209,2.01068167040216,1.59165177632921,1.16978452271472,1.79763881730844,1.94524244887225,0.995706366271836,0.379335801906163,0.45699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| ||
|EntrezGene=338372 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q3U1V8 | |||
|association_with_transcript=0bp_to_ENSMUST00000035987,NM_001174107,NM_177395,uc007oco.2,uc007ocp.2_5end | |||
|description=CAGE_peak_1_at_Map3k9_5end | |||
|id=chr12:82882108..82882163,- | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-13!23;CL:0000337!1.26e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.60e-15,23;CL:0000337,8.60e-15,23;CL:0000540,3.90e-07,33;CL:0000047,3.90e-07,33;CL:0000031,3.90e-07,33;CL:0000404,3.90e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.03e-15!52;UBERON:0005068!2.03e-15!52;UBERON:0006241!2.03e-15!52;UBERON:0007135!2.03e-15!52;UBERON:0002020!7.39e-15!34;UBERON:0000955!8.40e-14!50;UBERON:0006238!8.40e-14!50;UBERON:0000033!9.86e-14!63;UBERON:0002616!1.30e-13!49;UBERON:0003080!2.86e-12!40;UBERON:0002780!5.38e-12!39;UBERON:0001890!5.38e-12!39;UBERON:0006240!5.38e-12!39;UBERON:0002346!6.07e-12!71;UBERON:0003075!6.07e-12!71;UBERON:0007284!6.07e-12!71;UBERON:0002791!6.67e-12!29;UBERON:0003528!6.67e-12!29;UBERON:0001893!6.67e-12!29;UBERON:0003056!9.22e-12!49;UBERON:0001017!4.36e-11!73;UBERON:0005743!4.36e-11!73;UBERON:0004121!1.23e-10!102;UBERON:0000924!1.23e-10!102;UBERON:0006601!1.23e-10!102;UBERON:0000073!4.03e-10!75;UBERON:0001016!4.03e-10!75;UBERON:0000956!4.01e-08!21;UBERON:0001869!4.01e-08!21;UBERON:0000203!4.01e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.23e-18,54;UBERON:0001049,5.07e-17,52;UBERON:0005068,5.07e-17,52;UBERON:0006241,5.07e-17,52;UBERON:0007135,5.07e-17,52;UBERON:0002020,2.64e-16,34;UBERON:0010371,3.16e-14,73;UBERON:0002346,5.68e-14,64;UBERON:0003075,5.68e-14,64;UBERON:0007284,5.68e-14,64;UBERON:0000955,1.25e-13,47;UBERON:0006238,1.25e-13,47;UBERON:0002616,2.00e-13,46;UBERON:0003080,3.21e-13,40;UBERON:0003528,4.68e-13,29;UBERON:0002791,4.68e-13,29;UBERON:0001893,4.68e-13,29;UBERON:0002780,6.43e-13,39;UBERON:0001890,6.43e-13,39;UBERON:0006240,6.43e-13,39;UBERON:0001017,1.57e-12,73;UBERON:0004121,2.73e-12,95;UBERON:0000924,2.73e-12,95;UBERON:0006601,2.73e-12,95;UBERON:0003056,4.61e-12,49;UBERON:0001016,1.53e-11,75;UBERON:0000956,6.66e-09,21;UBERON:0001869,6.66e-09,21;UBERON:0000203,6.66e-09,21;UBERON:0002619,6.93e-07,17 | |||
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| |||
|short_description=p1@Map3k9 | |||
}} |
Revision as of 23:23, 12 September 2013
Short description: | p1@Map3k9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Map3k9_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000035987, NM_001174107, NM_177395, uc007oco.2, uc007ocp.2_5end |
EntrezGene: | Map3k9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.60e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.60e-15 | 23 |
neuron | 3.90e-07 | 33 |
neuronal stem cell | 3.90e-07 | 33 |
neuroblast | 3.90e-07 | 33 |
electrically signaling cell | 3.90e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.23e-18 | 54 |
neural tube | 5.07e-17 | 52 |
neural rod | 5.07e-17 | 52 |
future spinal cord | 5.07e-17 | 52 |
neural keel | 5.07e-17 | 52 |
gray matter | 2.64e-16 | 34 |
ecto-epithelium | 3.16e-14 | 73 |
neurectoderm | 5.68e-14 | 64 |
neural plate | 5.68e-14 | 64 |
presumptive neural plate | 5.68e-14 | 64 |
brain | 1.25e-13 | 47 |
future brain | 1.25e-13 | 47 |
regional part of brain | 2.00e-13 | 46 |
anterior neural tube | 3.21e-13 | 40 |
brain grey matter | 4.68e-13 | 29 |
regional part of telencephalon | 4.68e-13 | 29 |
telencephalon | 4.68e-13 | 29 |
regional part of forebrain | 6.43e-13 | 39 |
forebrain | 6.43e-13 | 39 |
future forebrain | 6.43e-13 | 39 |
central nervous system | 1.57e-12 | 73 |
ectoderm-derived structure | 2.73e-12 | 95 |
ectoderm | 2.73e-12 | 95 |
presumptive ectoderm | 2.73e-12 | 95 |
pre-chordal neural plate | 4.61e-12 | 49 |
nervous system | 1.53e-11 | 75 |
cerebral cortex | 6.66e-09 | 21 |
cerebral hemisphere | 6.66e-09 | 21 |
pallium | 6.66e-09 | 21 |
regional part of cerebral cortex | 6.93e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.