FFCP PHASE1:Mm9::chr14:70970929..70970937,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70970929..70970937,+|id=chr14:70970929..70970937,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002603,3.12e-12,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!3.13e-13!6;UBERON:0004733!4.54e-09!6;UBERON:0004732!4.54e-09!6;UBERON:0002028!4.54e-09!6;UBERON:0007277!4.54e-09!6;UBERON:0002950!1.03e-07!4;UBERON:0001891!1.03e-07!4;UBERON:0009616!1.03e-07!4;UBERON:0001896!2.06e-07!2;UBERON:0005290!2.06e-07!2;UBERON:0010096!2.06e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0004733,2.03e-33,6;UBERON:0004732,2.03e-33,6;UBERON:0002028,2.03e-33,6;UBERON:0007277,2.03e-33,6;UBERON:0002037,1.08e-22,4;UBERON:0002680,1.08e-22,4;UBERON:0001895,1.08e-22,4;UBERON:0010092,1.08e-22,4;UBERON:0006215,1.08e-22,4;UBERON:0003076,2.99e-17,12;UBERON:0003057,2.99e-17,12;UBERON:0001896,2.42e-12,2;UBERON:0002298,2.42e-12,2;UBERON:0005290,2.42e-12,2;UBERON:0010096,2.42e-12,2;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,2.30391377494801,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:70970929..70970937,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:70970929..70970937,+ | |||
|id=chr14:70970929..70970937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.12e-12,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.13e-13!6;UBERON:0004733!4.54e-09!6;UBERON:0004732!4.54e-09!6;UBERON:0002028!4.54e-09!6;UBERON:0007277!4.54e-09!6;UBERON:0002950!1.03e-07!4;UBERON:0001891!1.03e-07!4;UBERON:0009616!1.03e-07!4;UBERON:0001896!2.06e-07!2;UBERON:0005290!2.06e-07!2;UBERON:0010096!2.06e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,2.03e-33,6;UBERON:0004732,2.03e-33,6;UBERON:0002028,2.03e-33,6;UBERON:0007277,2.03e-33,6;UBERON:0002037,1.08e-22,4;UBERON:0002680,1.08e-22,4;UBERON:0001895,1.08e-22,4;UBERON:0010092,1.08e-22,4;UBERON:0006215,1.08e-22,4;UBERON:0003076,2.99e-17,12;UBERON:0003057,2.99e-17,12;UBERON:0001896,2.42e-12,2;UBERON:0002298,2.42e-12,2;UBERON:0005290,2.42e-12,2;UBERON:0010096,2.42e-12,2;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,2.30391377494801,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:70970929..70970937,+ | |||
}} |
Revision as of 03:01, 13 September 2013
Short description: | p@chr14:70970929..70970937, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70970929..70970937, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.12e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 2.03e-33 | 6 |
segmental subdivision of nervous system | 2.03e-33 | 6 |
hindbrain | 2.03e-33 | 6 |
presumptive hindbrain | 2.03e-33 | 6 |
cerebellum | 1.08e-22 | 4 |
regional part of metencephalon | 1.08e-22 | 4 |
metencephalon | 1.08e-22 | 4 |
future metencephalon | 1.08e-22 | 4 |
rhombic lip | 1.08e-22 | 4 |
posterior neural tube | 2.99e-17 | 12 |
chordal neural plate | 2.99e-17 | 12 |
medulla oblongata | 2.42e-12 | 2 |
brainstem | 2.42e-12 | 2 |
myelencephalon | 2.42e-12 | 2 |
future myelencephalon | 2.42e-12 | 2 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.