FFCP PHASE1:Mm9::chr18:82644597..82644624,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17196|HGNC=|MCL_coexpression_id=7|UniProt=P04370|association_with_transcript=43bp_to_ENSMUST00000047865_5end|description=CAGE_peak_2_at_Mbp_5end|id=chr18:82644597..82644624,+|ontology_enrichment_celltype=CL:0000791!1.54e-07!9;CL:0000789!1.54e-07!9;CL:0002420!1.54e-07!9;CL:0002419!1.54e-07!9;CL:0000790!1.54e-07!9;CL:0002031!2.10e-07!25;CL:0000624!7.23e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,1.51e-07,9;CL:0000789,1.51e-07,9;CL:0002420,1.51e-07,9;CL:0002419,1.51e-07,9;CL:0000790,1.51e-07,9;CL:0002031,2.35e-07,25;CL:0000624,7.13e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.59e-16!128;UBERON:0001555!1.59e-16!128;UBERON:0007026!1.59e-16!128;UBERON:0004119!1.81e-16!130;UBERON:0000925!1.81e-16!130;UBERON:0006595!1.81e-16!130;UBERON:0004921!1.13e-15!126;UBERON:0004185!1.13e-15!126;UBERON:0005409!3.44e-13!59;UBERON:0000064!4.50e-10!99;UBERON:0000160!7.26e-10!43;UBERON:0000077!2.40e-09!97;UBERON:0001041!1.03e-08!92;UBERON:0002193!1.07e-08!48;UBERON:0004177!1.51e-08!29;UBERON:0000072!6.76e-08!27;UBERON:0002390!1.61e-07!45;UBERON:0003061!1.61e-07!45;UBERON:0001004!1.63e-07!42;UBERON:0006562!1.99e-07!24;UBERON:0001557!1.99e-07!24;UBERON:0001042!1.99e-07!24;UBERON:0008814!1.99e-07!24;UBERON:0009145!1.99e-07!24;UBERON:0003408!2.47e-07!24;UBERON:0000065!2.61e-07!41;UBERON:0004923!3.45e-07!24;UBERON:0002370!3.86e-07!23;UBERON:0000974!3.86e-07!23;UBERON:0004807!3.86e-07!23;UBERON:0005058!3.86e-07!23;UBERON:0003351!3.86e-07!23;UBERON:0009113!3.86e-07!23;UBERON:0003295!3.86e-07!23;UBERON:0009722!3.86e-07!23;UBERON:0005562!3.86e-07!23;UBERON:0007690!3.86e-07!23;UBERON:0002075!7.67e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.17e-12,116;UBERON:0001555,3.17e-12,116;UBERON:0007026,3.17e-12,116;UBERON:0004119,3.56e-12,118;UBERON:0000925,3.56e-12,118;UBERON:0006595,3.56e-12,118;UBERON:0004921,1.74e-11,114;UBERON:0000077,2.21e-09,35;UBERON:0005409,5.33e-09,47;UBERON:0002193,8.81e-09,48;UBERON:0002405,8.81e-09,48;UBERON:0004177,1.04e-08,29;UBERON:0005057,1.04e-08,29;UBERON:0000072,4.68e-08,27;UBERON:0001004,1.22e-07,42;UBERON:0002390,1.34e-07,45;UBERON:0003061,1.34e-07,45;UBERON:0006562,1.37e-07,24;UBERON:0001557,1.37e-07,24;UBERON:0001042,1.37e-07,24;UBERON:0008814,1.37e-07,24;UBERON:0009145,1.37e-07,24;UBERON:0003408,1.71e-07,24;UBERON:0000065,1.95e-07,41;UBERON:0002370,2.66e-07,23;UBERON:0000974,2.66e-07,23;UBERON:0004807,2.66e-07,23;UBERON:0005058,2.66e-07,23;UBERON:0003351,2.66e-07,23;UBERON:0009113,2.66e-07,23;UBERON:0003295,2.66e-07,23;UBERON:0009722,2.66e-07,23;UBERON:0005562,2.66e-07,23;UBERON:0007690,2.66e-07,23;UBERON:0004923,3.40e-07,24;UBERON:0002075,7.56e-07,19|phase1_expression=1.60148847104794,18.1467211972468,36.8549383905524,9.67885476181856,9.5170188689806,30.5540274879639,21.7259755753839,37.9622570918234,169.228044026303,190.762588952425,72.9388544640651,91.1795777316695,48.4498065705312,49.9170497812475,19.3203661853084,15.9955461237963,16.7894850750755,16.4040325986284,16.1795031654772,10.1853516431527,4.59233766815777,4.86525660884338,3.39559725880616,15.0392877425802,20.4174260149781,25.2662064210609,32.3071497119306,27.5803177837938,5.89072600314759,9.07308467135751,19.0688239163562,11.4305521222734,9.84103660135312,31.6963362030877,13.8648777480612,15.1273527276228,15.5168710759401,26.7860243671621,19.533383613095,16.2292360631877,50.5879079706672,36.8844561877561,31.0726625939938,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.839918529752175,0,8.22134769682908,59.4796956449302,70.5796978199174,0,2.29226751951005,9.7977697532714,6.06949382578793,4.7609188134483,3.80298842103708,1.35537812827653,0.889294796111139,4.49949858640699,1.97773272513395,3.5524005747305,1.49800055259202,0.768436610643109,1.24427534770173,1.62007125998029,0.841299845405528,4.85606673486466,2.87129103237098,5.38959516545798,2.58782771749238,5.51531271966013,0,4.97980618532232,3.99376986466233,5.27545150920775,4.29991924931325,6.77187381723788,2.23346399201105,5.06486349028512,5.19514042441154,5.00868595305235,3.84403538157578,2.79599168737951,0.908714319998209,0,14.7830889237856,0.860423876981386,0.679971333707751,0,0,0.448026887097336,3.7919993435573,0,0,0,3.09855523508697,0,0,0,12.3399893376392,11.1478340809043,8.59391556525132,5.59501010623394,30.8136081540134,4.45326417194474,1.04091196059682,2.74018930480927,0.461230994512117,2.26083960828934,3.99801604261396,1.38233250462643,28.427421289453,11.423349196673,15.9229899350977,2.42650274921114,9.27534377533653,6.78825354389311,7.45567044872489,4.9772735491963,6.0739544975902,13.0283098156382,7.6681679683789,3.59941638596045,5.97230067243404,6.5907881338122,10.980014467647,7.28795242254614,14.9488915365358,13.8086346958378,4.1557608911912,6.97637431191358,2.24046600470696,8.33526703087623,1.76905930903572,6.94458124425364,2.34216797332867,2.29902104433473,3.06105620669094,2.86339153887859,7.27990540919208,3.84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| ||
|EntrezGene=17196 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=P04370 | |||
|association_with_transcript=43bp_to_ENSMUST00000047865_5end | |||
|description=CAGE_peak_2_at_Mbp_5end | |||
|id=chr18:82644597..82644624,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.54e-07!9;CL:0000789!1.54e-07!9;CL:0002420!1.54e-07!9;CL:0002419!1.54e-07!9;CL:0000790!1.54e-07!9;CL:0002031!2.10e-07!25;CL:0000624!7.23e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.51e-07,9;CL:0000789,1.51e-07,9;CL:0002420,1.51e-07,9;CL:0002419,1.51e-07,9;CL:0000790,1.51e-07,9;CL:0002031,2.35e-07,25;CL:0000624,7.13e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.59e-16!128;UBERON:0001555!1.59e-16!128;UBERON:0007026!1.59e-16!128;UBERON:0004119!1.81e-16!130;UBERON:0000925!1.81e-16!130;UBERON:0006595!1.81e-16!130;UBERON:0004921!1.13e-15!126;UBERON:0004185!1.13e-15!126;UBERON:0005409!3.44e-13!59;UBERON:0000064!4.50e-10!99;UBERON:0000160!7.26e-10!43;UBERON:0000077!2.40e-09!97;UBERON:0001041!1.03e-08!92;UBERON:0002193!1.07e-08!48;UBERON:0004177!1.51e-08!29;UBERON:0000072!6.76e-08!27;UBERON:0002390!1.61e-07!45;UBERON:0003061!1.61e-07!45;UBERON:0001004!1.63e-07!42;UBERON:0006562!1.99e-07!24;UBERON:0001557!1.99e-07!24;UBERON:0001042!1.99e-07!24;UBERON:0008814!1.99e-07!24;UBERON:0009145!1.99e-07!24;UBERON:0003408!2.47e-07!24;UBERON:0000065!2.61e-07!41;UBERON:0004923!3.45e-07!24;UBERON:0002370!3.86e-07!23;UBERON:0000974!3.86e-07!23;UBERON:0004807!3.86e-07!23;UBERON:0005058!3.86e-07!23;UBERON:0003351!3.86e-07!23;UBERON:0009113!3.86e-07!23;UBERON:0003295!3.86e-07!23;UBERON:0009722!3.86e-07!23;UBERON:0005562!3.86e-07!23;UBERON:0007690!3.86e-07!23;UBERON:0002075!7.67e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.17e-12,116;UBERON:0001555,3.17e-12,116;UBERON:0007026,3.17e-12,116;UBERON:0004119,3.56e-12,118;UBERON:0000925,3.56e-12,118;UBERON:0006595,3.56e-12,118;UBERON:0004921,1.74e-11,114;UBERON:0000077,2.21e-09,35;UBERON:0005409,5.33e-09,47;UBERON:0002193,8.81e-09,48;UBERON:0002405,8.81e-09,48;UBERON:0004177,1.04e-08,29;UBERON:0005057,1.04e-08,29;UBERON:0000072,4.68e-08,27;UBERON:0001004,1.22e-07,42;UBERON:0002390,1.34e-07,45;UBERON:0003061,1.34e-07,45;UBERON:0006562,1.37e-07,24;UBERON:0001557,1.37e-07,24;UBERON:0001042,1.37e-07,24;UBERON:0008814,1.37e-07,24;UBERON:0009145,1.37e-07,24;UBERON:0003408,1.71e-07,24;UBERON:0000065,1.95e-07,41;UBERON:0002370,2.66e-07,23;UBERON:0000974,2.66e-07,23;UBERON:0004807,2.66e-07,23;UBERON:0005058,2.66e-07,23;UBERON:0003351,2.66e-07,23;UBERON:0009113,2.66e-07,23;UBERON:0003295,2.66e-07,23;UBERON:0009722,2.66e-07,23;UBERON:0005562,2.66e-07,23;UBERON:0007690,2.66e-07,23;UBERON:0004923,3.40e-07,24;UBERON:0002075,7.56e-07,19 | |||
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| |||
|short_description=p2@Mbp | |||
}} |
Revision as of 16:51, 13 September 2013
Short description: | p2@Mbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 43bp_to_ENSMUST00000047865_5end |
EntrezGene: | Mbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.51e-07 | 9 |
alpha-beta T cell | 1.51e-07 | 9 |
immature T cell | 1.51e-07 | 9 |
mature T cell | 1.51e-07 | 9 |
immature alpha-beta T cell | 1.51e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 2.35e-07 | 25 |
CD4-positive, alpha-beta T cell | 7.13e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.