FFCP PHASE1:Hg19::chr6:148663832..148663847,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23328|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19182|TSSclassifier=S|UniProt=O94885|association_with_transcript=103bp_to_ENST00000367467,NM_015278,uc003qme.1_5end|description=CAGE_peak_7_at_SASH1_5end|id=chr6:148663832..148663847,+|ontology_enrichment_celltype=CL:0002057!7.63e-24!42;CL:0000860!9.97e-21!45;CL:0002194!8.00e-20!63;CL:0000576!8.00e-20!63;CL:0000040!8.00e-20!63;CL:0000559!8.00e-20!63;CL:0002009!2.00e-18!65;CL:0000839!2.37e-15!70;CL:0000557!8.44e-15!71;CL:0002139!1.23e-13!24;CL:0000766!2.56e-13!76;CL:0000115!6.30e-12!35;CL:0000071!3.19e-11!18;CL:0002546!3.19e-11!18;CL:0002078!2.54e-09!44;CL:0000148!2.45e-07!10;CL:0000541!2.45e-07!10;CL:1000413!5.43e-07!9|ontology_enrichment_celltype_v019=CL:0000860;3.84e-32;33!CL:0002057;3.84e-32;33!CL:0000473;6.20e-26;39!CL:0000234;6.20e-26;39!CL:0000576;1.76e-25;48!CL:0002139;1.64e-14;24!CL:0000115;3.39e-14;36!CL:0000766;3.56e-14;69!CL:0000071;2.65e-13;18!CL:0000148;7.69e-13;10!CL:1000413;5.95e-10;9!CL:0002078;8.00e-09;45!CL:0000147;1.75e-08;14!CL:0002322;2.55e-07;5|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-35,48;CL:0000234,1.26e-35,48;CL:0000860,2.04e-35,42;CL:0002057,2.04e-35,42;CL:0002194,1.15e-33,59;CL:0000576,1.15e-33,59;CL:0000040,1.15e-33,59;CL:0000559,1.15e-33,59;CL:0002009,4.06e-32,61;CL:0000839,1.15e-28,66;CL:0000557,4.85e-28,67;CL:0000766,3.59e-25,72;CL:0000115,1.75e-16,36;CL:0002139,5.30e-15,24;CL:0000071,8.96e-14,18;CL:0002546,8.96e-14,18;CL:0000148,2.11e-13,10;CL:0000541,2.11e-13,10;CL:0002078,6.08e-13,45;CL:0000763,1.30e-12,108;CL:0000049,1.30e-12,108;CL:0002087,3.84e-11,115;CL:1000413,1.37e-10,9;CL:0002031,3.28e-10,120;CL:0000147,7.36e-09,14;CL:0000213,1.62e-08,58;CL:0000215,1.62e-08,58;CL:0002322,9.30e-08,5;CL:0000738,9.40e-08,136;CL:0002544,9.98e-07,6|ontology_enrichment_development_v019=CL:0002057;1.13e-25;42!CL:0002546;2.65e-13;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.22e-13!659;UBERON:0000467!3.40e-12!625;UBERON:0000480!5.14e-12!626;UBERON:0002371!9.70e-12!80;UBERON:0007023!2.61e-11!115;UBERON:0001986!3.19e-11!18;UBERON:0004638!3.19e-11!18;UBERON:0004852!3.19e-11!18;UBERON:0001474!5.67e-11!86;UBERON:0004765!7.62e-11!101;UBERON:0001434!7.62e-11!101;UBERON:0002193!3.10e-10!112;UBERON:0002405!1.39e-09!115;UBERON:0002390!8.52e-09!102;UBERON:0003061!8.52e-09!102;UBERON:0006914!8.87e-09!25;UBERON:0000922!9.86e-09!612;UBERON:0003081!1.46e-08!216;UBERON:0000487!2.88e-08!22;UBERON:0000062!6.63e-08!511;UBERON:0001893!1.88e-07!34;UBERON:0002020!2.34e-07!34;UBERON:0003528!2.34e-07!34;UBERON:0000923!3.37e-07!604;UBERON:0005291!3.37e-07!604;UBERON:0006598!3.37e-07!604;UBERON:0002532!3.37e-07!604;UBERON:0002791!4.39e-07!33;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0003915!5.43e-07!9;UBERON:0004700!5.43e-07!9;UBERON:0001917!5.43e-07!9;UBERON:0001869!5.44e-07!32;UBERON:0001049!7.18e-07!57;UBERON:0005068!7.18e-07!57;UBERON:0006241!7.18e-07!57;UBERON:0007135!7.18e-07!57|ontology_enrichment_uberon_v019=UBERON:0004638;2.65e-13;18!UBERON:0001986;2.65e-13;18!UBERON:0004852;2.65e-13;18!UBERON:0000487;3.58e-10;22!UBERON:0003915;5.95e-10;9!UBERON:0004700;5.95e-10;9!UBERON:0001917;5.95e-10;9!UBERON:0006914;8.17e-10;25|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.72e-23,76;UBERON:0002405,6.97e-23,93;UBERON:0001474,7.57e-22,82;UBERON:0004765,9.70e-19,90;UBERON:0002193,1.02e-17,108;UBERON:0001434,2.01e-17,100;UBERON:0002390,3.28e-17,98;UBERON:0003061,3.28e-17,98;UBERON:0003081,1.71e-14,203;UBERON:0004638,8.96e-14,18;UBERON:0001986,8.96e-14,18;UBERON:0004852,8.96e-14,18;UBERON:0003915,1.37e-10,9;UBERON:0004700,1.37e-10,9;UBERON:0001917,1.37e-10,9;UBERON:0000487,1.53e-10,22;UBERON:0006914,3.91e-10,25;UBERON:0000926,3.32e-08,315;UBERON:0004120,3.32e-08,315;UBERON:0006603,3.32e-08,315;UBERON:0002204,1.34e-07,167;UBERON:0000922,4.44e-07,592|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,0,0.618831764800233,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,1.11957737119962,0.647787332037959,1.03030227053675,1.59938062657521,4.1566353805769,3.88134497900506,1.16214518452842,4.11167888021826,3.09706370895104,3.16461631554365,4.35473201099471,2.36482229888585,1.37898272294647,0.645484683583826,1.35426486594342,1.31769637679823,2.72906150057846,1.79778787556068,2.14258724659632,2.88836124368484,1.91801137739712,3.29851300186716,2.79249120670285,3.40979800426155,2.03146467040009,2.26954089876456,1.24564449799115,4.52247597462138,3.65038042894141,1.95469960234605,1.21079900526674,3.68277635987565,2.84816148696796,1.69004229049553,1.06302149982522,1.25795187305026,0.786300418025466,0.450530678524519,1.1250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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19182 | |||
|TSSclassifier=S | |||
|UniProt=O94885 | |||
|association_with_transcript=103bp_to_ENST00000367467,NM_015278,uc003qme.1_5end | |||
|description=CAGE_peak_7_at_SASH1_5end | |||
|id=chr6:148663832..148663847,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.63e-24!42;CL:0000860!9.97e-21!45;CL:0002194!8.00e-20!63;CL:0000576!8.00e-20!63;CL:0000040!8.00e-20!63;CL:0000559!8.00e-20!63;CL:0002009!2.00e-18!65;CL:0000839!2.37e-15!70;CL:0000557!8.44e-15!71;CL:0002139!1.23e-13!24;CL:0000766!2.56e-13!76;CL:0000115!6.30e-12!35;CL:0000071!3.19e-11!18;CL:0002546!3.19e-11!18;CL:0002078!2.54e-09!44;CL:0000148!2.45e-07!10;CL:0000541!2.45e-07!10;CL:1000413!5.43e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.84e-32;33!CL:0002057;3.84e-32;33!CL:0000473;6.20e-26;39!CL:0000234;6.20e-26;39!CL:0000576;1.76e-25;48!CL:0002139;1.64e-14;24!CL:0000115;3.39e-14;36!CL:0000766;3.56e-14;69!CL:0000071;2.65e-13;18!CL:0000148;7.69e-13;10!CL:1000413;5.95e-10;9!CL:0002078;8.00e-09;45!CL:0000147;1.75e-08;14!CL:0002322;2.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-35,48;CL:0000234,1.26e-35,48;CL:0000860,2.04e-35,42;CL:0002057,2.04e-35,42;CL:0002194,1.15e-33,59;CL:0000576,1.15e-33,59;CL:0000040,1.15e-33,59;CL:0000559,1.15e-33,59;CL:0002009,4.06e-32,61;CL:0000839,1.15e-28,66;CL:0000557,4.85e-28,67;CL:0000766,3.59e-25,72;CL:0000115,1.75e-16,36;CL:0002139,5.30e-15,24;CL:0000071,8.96e-14,18;CL:0002546,8.96e-14,18;CL:0000148,2.11e-13,10;CL:0000541,2.11e-13,10;CL:0002078,6.08e-13,45;CL:0000763,1.30e-12,108;CL:0000049,1.30e-12,108;CL:0002087,3.84e-11,115;CL:1000413,1.37e-10,9;CL:0002031,3.28e-10,120;CL:0000147,7.36e-09,14;CL:0000213,1.62e-08,58;CL:0000215,1.62e-08,58;CL:0002322,9.30e-08,5;CL:0000738,9.40e-08,136;CL:0002544,9.98e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-25;42!CL:0002546;2.65e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.22e-13!659;UBERON:0000467!3.40e-12!625;UBERON:0000480!5.14e-12!626;UBERON:0002371!9.70e-12!80;UBERON:0007023!2.61e-11!115;UBERON:0001986!3.19e-11!18;UBERON:0004638!3.19e-11!18;UBERON:0004852!3.19e-11!18;UBERON:0001474!5.67e-11!86;UBERON:0004765!7.62e-11!101;UBERON:0001434!7.62e-11!101;UBERON:0002193!3.10e-10!112;UBERON:0002405!1.39e-09!115;UBERON:0002390!8.52e-09!102;UBERON:0003061!8.52e-09!102;UBERON:0006914!8.87e-09!25;UBERON:0000922!9.86e-09!612;UBERON:0003081!1.46e-08!216;UBERON:0000487!2.88e-08!22;UBERON:0000062!6.63e-08!511;UBERON:0001893!1.88e-07!34;UBERON:0002020!2.34e-07!34;UBERON:0003528!2.34e-07!34;UBERON:0000923!3.37e-07!604;UBERON:0005291!3.37e-07!604;UBERON:0006598!3.37e-07!604;UBERON:0002532!3.37e-07!604;UBERON:0002791!4.39e-07!33;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0003915!5.43e-07!9;UBERON:0004700!5.43e-07!9;UBERON:0001917!5.43e-07!9;UBERON:0001869!5.44e-07!32;UBERON:0001049!7.18e-07!57;UBERON:0005068!7.18e-07!57;UBERON:0006241!7.18e-07!57;UBERON:0007135!7.18e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.65e-13;18!UBERON:0001986;2.65e-13;18!UBERON:0004852;2.65e-13;18!UBERON:0000487;3.58e-10;22!UBERON:0003915;5.95e-10;9!UBERON:0004700;5.95e-10;9!UBERON:0001917;5.95e-10;9!UBERON:0006914;8.17e-10;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.72e-23,76;UBERON:0002405,6.97e-23,93;UBERON:0001474,7.57e-22,82;UBERON:0004765,9.70e-19,90;UBERON:0002193,1.02e-17,108;UBERON:0001434,2.01e-17,100;UBERON:0002390,3.28e-17,98;UBERON:0003061,3.28e-17,98;UBERON:0003081,1.71e-14,203;UBERON:0004638,8.96e-14,18;UBERON:0001986,8.96e-14,18;UBERON:0004852,8.96e-14,18;UBERON:0003915,1.37e-10,9;UBERON:0004700,1.37e-10,9;UBERON:0001917,1.37e-10,9;UBERON:0000487,1.53e-10,22;UBERON:0006914,3.91e-10,25;UBERON:0000926,3.32e-08,315;UBERON:0004120,3.32e-08,315;UBERON:0006603,3.32e-08,315;UBERON:0002204,1.34e-07,167;UBERON:0000922,4.44e-07,592 | |||
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| |||
|short_description=p7@SASH1 | |||
}} |
Revision as of 18:38, 13 September 2013
Short description: | p7@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 103bp_to_ENST00000367467, NM_015278, uc003qme.1_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | O94885 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.26e-35 | 48 |
phagocyte | 1.26e-35 | 48 |
classical monocyte | 2.04e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-35 | 42 |
monopoietic cell | 1.15e-33 | 59 |
monocyte | 1.15e-33 | 59 |
monoblast | 1.15e-33 | 59 |
promonocyte | 1.15e-33 | 59 |
macrophage dendritic cell progenitor | 4.06e-32 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-28 | 66 |
granulocyte monocyte progenitor cell | 4.85e-28 | 67 |
myeloid leukocyte | 3.59e-25 | 72 |
endothelial cell | 1.75e-16 | 36 |
endothelial cell of vascular tree | 5.30e-15 | 24 |
blood vessel endothelial cell | 8.96e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.96e-14 | 18 |
melanocyte | 2.11e-13 | 10 |
melanoblast | 2.11e-13 | 10 |
meso-epithelial cell | 6.08e-13 | 45 |
myeloid cell | 1.30e-12 | 108 |
common myeloid progenitor | 1.30e-12 | 108 |
nongranular leukocyte | 3.84e-11 | 115 |
endothelial cell of artery | 1.37e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 3.28e-10 | 120 |
pigment cell | 7.36e-09 | 14 |
lining cell | 1.62e-08 | 58 |
barrier cell | 1.62e-08 | 58 |
embryonic stem cell | 9.30e-08 | 5 |
leukocyte | 9.40e-08 | 136 |
aortic endothelial cell | 9.98e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.72e-23 | 76 |
immune system | 6.97e-23 | 93 |
bone element | 7.57e-22 | 82 |
skeletal element | 9.70e-19 | 90 |
hemolymphoid system | 1.02e-17 | 108 |
skeletal system | 2.01e-17 | 100 |
hematopoietic system | 3.28e-17 | 98 |
blood island | 3.28e-17 | 98 |
lateral plate mesoderm | 1.71e-14 | 203 |
blood vessel endothelium | 8.96e-14 | 18 |
endothelium | 8.96e-14 | 18 |
cardiovascular system endothelium | 8.96e-14 | 18 |
endothelial tube | 1.37e-10 | 9 |
arterial system endothelium | 1.37e-10 | 9 |
endothelium of artery | 1.37e-10 | 9 |
simple squamous epithelium | 1.53e-10 | 22 |
squamous epithelium | 3.91e-10 | 25 |
mesoderm | 3.32e-08 | 315 |
mesoderm-derived structure | 3.32e-08 | 315 |
presumptive mesoderm | 3.32e-08 | 315 |
musculoskeletal system | 1.34e-07 | 167 |
embryo | 4.44e-07 | 592 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.