FFCP PHASE1:Mm9::chr1:163424780..163424787,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240873|HGNC=|UniProt=Q7TS55|association_with_transcript=0bp_to_ENSMUST00000086084,NM_183391,uc007dfo.2_5end|description=CAGE_peak_1_at_Tnfsf18_5end|id=chr1:163424780..163424787,+|ontology_enrichment_celltype=CL:0000107!1.83e-07!9;CL:0000222!5.46e-07!7|ontology_enrichment_celltype_v019_2=CL:0000680,2.83e-24,6;CL:0000187,2.83e-24,6;CL:0000056,2.83e-24,6;CL:0000107,2.96e-24,9;CL:0000222,7.10e-21,7;CL:0000393,6.67e-18,39;CL:0000211,6.67e-18,39;CL:0000355,2.47e-16,9;CL:0002494,3.66e-13,3;CL:0000737,3.66e-13,3;CL:0000746,3.66e-13,3;CL:0000513,3.66e-13,3;CL:0000192,9.50e-13,3;CL:0000359,9.50e-13,3;CL:0002539,9.50e-13,3;CL:0000514,9.50e-13,3;CL:0002321,9.06e-10,70;CL:0000723,2.22e-07,91;CL:0000048,2.22e-07,91;CL:0000034,6.95e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.83e-08!23;UBERON:0001009!6.83e-08!23;UBERON:0000010!1.44e-07!11;UBERON:0004872!1.66e-07!33;UBERON:0002410!1.83e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.99e-27,3;UBERON:0002410,2.96e-24,9;UBERON:0000010,6.85e-20,11;UBERON:0001134,2.47e-16,9;UBERON:0002036,2.47e-16,9;UBERON:0002385,2.47e-16,9;UBERON:0000486,2.47e-16,9;UBERON:0007503,2.47e-16,9;UBERON:0001015,2.47e-16,9;UBERON:0002329,2.47e-16,9;UBERON:0003082,2.47e-16,9;UBERON:0003059,2.47e-16,9;UBERON:0007282,2.47e-16,9;UBERON:0004290,2.47e-16,9;UBERON:0009618,2.47e-16,9;UBERON:0000383,9.68e-15,10;UBERON:0007524,1.96e-13,11;UBERON:0003077,1.96e-13,11;UBERON:0007285,1.96e-13,11;UBERON:0001135,9.50e-13,3;UBERON:0004237,9.50e-13,3;UBERON:0004695,9.50e-13,3;UBERON:0002111,9.50e-13,3;UBERON:0004178,9.50e-13,3;UBERON:0000011,1.86e-12,3;UBERON:0000947,8.47e-10,4;UBERON:0001637,8.47e-10,4;UBERON:0004573,8.47e-10,4;UBERON:0003509,8.47e-10,4;UBERON:0004571,8.47e-10,4;UBERON:0010191,8.47e-10,4;UBERON:0004572,8.47e-10,4;UBERON:0000055,5.11e-08,5;UBERON:0007500,5.11e-08,5;UBERON:0001981,5.11e-08,5;UBERON:0002049,5.11e-08,5;UBERON:0007798,5.11e-08,5;UBERON:0004537,5.11e-08,5;UBERON:0006965,5.11e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.85232338634155,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,4.3734104126111,0.85960031981627,4.12537673821954,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.536825675041487,0,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0.586058432961016,0,0,0.631016438832513,0.780877488593277,0,1.91175038362042,1.78238939265915,0.566153061577665,1.61924280669958,2.33804686329049,3.95287777946523,0,0,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.854354403989263,0,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.685738504770831,0.177475806159338,0.715308569841963,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p1@Tnfsf18}} | ||
|EntrezGene=240873 | |||
|HGNC= | |||
|UniProt=Q7TS55 | |||
|association_with_transcript=0bp_to_ENSMUST00000086084,NM_183391,uc007dfo.2_5end | |||
|description=CAGE_peak_1_at_Tnfsf18_5end | |||
|id=chr1:163424780..163424787,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.83e-07!9;CL:0000222!5.46e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.83e-24,6;CL:0000187,2.83e-24,6;CL:0000056,2.83e-24,6;CL:0000107,2.96e-24,9;CL:0000222,7.10e-21,7;CL:0000393,6.67e-18,39;CL:0000211,6.67e-18,39;CL:0000355,2.47e-16,9;CL:0002494,3.66e-13,3;CL:0000737,3.66e-13,3;CL:0000746,3.66e-13,3;CL:0000513,3.66e-13,3;CL:0000192,9.50e-13,3;CL:0000359,9.50e-13,3;CL:0002539,9.50e-13,3;CL:0000514,9.50e-13,3;CL:0002321,9.06e-10,70;CL:0000723,2.22e-07,91;CL:0000048,2.22e-07,91;CL:0000034,6.95e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.83e-08!23;UBERON:0001009!6.83e-08!23;UBERON:0000010!1.44e-07!11;UBERON:0004872!1.66e-07!33;UBERON:0002410!1.83e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.99e-27,3;UBERON:0002410,2.96e-24,9;UBERON:0000010,6.85e-20,11;UBERON:0001134,2.47e-16,9;UBERON:0002036,2.47e-16,9;UBERON:0002385,2.47e-16,9;UBERON:0000486,2.47e-16,9;UBERON:0007503,2.47e-16,9;UBERON:0001015,2.47e-16,9;UBERON:0002329,2.47e-16,9;UBERON:0003082,2.47e-16,9;UBERON:0003059,2.47e-16,9;UBERON:0007282,2.47e-16,9;UBERON:0004290,2.47e-16,9;UBERON:0009618,2.47e-16,9;UBERON:0000383,9.68e-15,10;UBERON:0007524,1.96e-13,11;UBERON:0003077,1.96e-13,11;UBERON:0007285,1.96e-13,11;UBERON:0001135,9.50e-13,3;UBERON:0004237,9.50e-13,3;UBERON:0004695,9.50e-13,3;UBERON:0002111,9.50e-13,3;UBERON:0004178,9.50e-13,3;UBERON:0000011,1.86e-12,3;UBERON:0000947,8.47e-10,4;UBERON:0001637,8.47e-10,4;UBERON:0004573,8.47e-10,4;UBERON:0003509,8.47e-10,4;UBERON:0004571,8.47e-10,4;UBERON:0010191,8.47e-10,4;UBERON:0004572,8.47e-10,4;UBERON:0000055,5.11e-08,5;UBERON:0007500,5.11e-08,5;UBERON:0001981,5.11e-08,5;UBERON:0002049,5.11e-08,5;UBERON:0007798,5.11e-08,5;UBERON:0004537,5.11e-08,5;UBERON:0006965,5.11e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.85232338634155,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,4.3734104126111,0.85960031981627,4.12537673821954,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.536825675041487,0,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0.586058432961016,0,0,0.631016438832513,0.780877488593277,0,1.91175038362042,1.78238939265915,0.566153061577665,1.61924280669958,2.33804686329049,3.95287777946523,0,0,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.854354403989263,0,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.685738504770831,0.177475806159338,0.715308569841963,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@Tnfsf18 | |||
}} |
Revision as of 19:26, 13 September 2013
Short description: | p1@Tnfsf18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfsf18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000086084, NM_183391, uc007dfo.2_5end |
EntrezGene: | Tnfsf18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.83e-24 | 6 |
muscle cell | 2.83e-24 | 6 |
myoblast | 2.83e-24 | 6 |
autonomic neuron | 2.96e-24 | 9 |
mesodermal cell | 7.10e-21 | 7 |
electrically responsive cell | 6.67e-18 | 39 |
electrically active cell | 6.67e-18 | 39 |
multi-potent skeletal muscle stem cell | 2.47e-16 | 9 |
cardiocyte | 3.66e-13 | 3 |
striated muscle cell | 3.66e-13 | 3 |
cardiac muscle cell | 3.66e-13 | 3 |
cardiac muscle myoblast | 3.66e-13 | 3 |
smooth muscle cell | 9.50e-13 | 3 |
vascular associated smooth muscle cell | 9.50e-13 | 3 |
aortic smooth muscle cell | 9.50e-13 | 3 |
smooth muscle myoblast | 9.50e-13 | 3 |
embryonic cell | 9.06e-10 | 70 |
somatic stem cell | 2.22e-07 | 91 |
multi fate stem cell | 2.22e-07 | 91 |
stem cell | 6.95e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.