FFCP PHASE1:Hg19::chr7:38315972..38316007,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=445347|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-53bp_to_uc003tgd.1_5end|description=CAGE_peak_5_at_TARP_5end|id=chr7:38315972..38316007,-|ontology_enrichment_celltype=CL:0000763!4.20e-34!112;CL:0000049!4.20e-34!112;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002057!7.20e-27!42;CL:0002032!1.41e-25!165;CL:0000837!1.41e-25!165;CL:0000988!5.30e-25!182;CL:0000860!1.47e-24!45;CL:0002194!7.00e-23!63;CL:0000576!7.00e-23!63;CL:0000040!7.00e-23!63;CL:0000559!7.00e-23!63;CL:0000557!1.56e-22!71;CL:0002009!6.51e-22!65;CL:0000766!7.68e-22!76;CL:0000839!3.16e-21!70;CL:0000738!2.07e-16!140;CL:0002087!1.28e-15!119;CL:0002031!1.27e-13!124;CL:0000623!1.88e-07!3;CL:0000825!1.88e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.23e-45;33!CL:0002057;1.23e-45;33!CL:0000473;2.84e-31;39!CL:0000234;2.84e-31;39!CL:0000576;9.87e-25;48!CL:0000763;1.81e-16;100!CL:0000766;2.58e-14;69!CL:0002087;8.64e-09;104!CL:0000623;3.13e-08;3!CL:0002032;6.75e-07;1!CL:0000557;6.75e-07;1|ontology_enrichment_celltype_v019_2=CL:0000763,6.73e-41,108;CL:0000049,6.73e-41,108;CL:0000860,2.21e-39,42;CL:0002057,2.21e-39,42;CL:0000473,5.70e-34,48;CL:0000234,5.70e-34,48;CL:0002194,6.16e-33,59;CL:0000576,6.16e-33,59;CL:0000040,6.16e-33,59;CL:0000559,6.16e-33,59;CL:0002032,8.41e-32,161;CL:0000837,8.41e-32,161;CL:0002009,9.82e-32,61;CL:0000557,1.01e-31,67;CL:0000037,3.13e-30,168;CL:0000839,4.83e-29,66;CL:0000988,2.17e-28,177;CL:0000766,2.68e-26,72;CL:0002087,1.95e-20,115;CL:0002031,2.17e-19,120;CL:0000738,2.86e-18,136;CL:0000134,4.28e-11,354;CL:0002320,9.33e-11,361;CL:0000219,1.46e-09,386;CL:0000034,2.03e-08,441;CL:0000623,3.50e-08,3;CL:0000825,3.50e-08,3;CL:0000048,4.25e-08,427;CL:0000723,6.77e-08,433|ontology_enrichment_development_v019=CL:0002057;6.57e-27;42!CL:0000049;3.18e-13;108|ontology_enrichment_disease=DOID:8692!4.44e-15!31;DOID:1240!1.15e-12!39;DOID:2531!1.32e-08!51;DOID:0060083!1.32e-08!51|ontology_enrichment_disease_v019=DOID:8692;5.14e-16;31!DOID:1240;1.29e-11;39!DOID:2531;5.83e-08;51!DOID:0060083;5.83e-08;51|ontology_enrichment_disease_v019_2=DOID:8692,8.75e-17,31;DOID:1240,1.31e-15,39;DOID:2531,1.93e-11,51;DOID:0060083,1.93e-11,51|ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!9.19e-25!112;UBERON:0002371!2.20e-20!80;UBERON:0001474!2.61e-18!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!2.86e-15!101;UBERON:0001434!2.86e-15!101;UBERON:0003081!1.84e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-27,76;UBERON:0002390,2.91e-27,98;UBERON:0003061,2.91e-27,98;UBERON:0001474,3.61e-25,82;UBERON:0002193,2.70e-24,108;UBERON:0002405,5.75e-24,93;UBERON:0004765,1.48e-22,90;UBERON:0001434,7.11e-20,100;UBERON:0003081,1.27e-10,203;UBERON:0002384,2.71e-10,371;UBERON:0002204,3.68e-10,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,9.20615655430881,11.5272317938095,10.1687358852092,2.06847408441971,6.45484683583826,1.35426486594342,0.188242339542605,0,0.224723484445085,1.53041946185451,1.28371610830437,0.639337125799041,1.9791078011203,2.39356389145958,3.40979800426155,0.290209238628584,1.13477044938228,3.11411124497787,28.8935965045255,13.5585558789252,19.7641848681656,0,3.31449872388808,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,1.18218456121156,0.646882724578552,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,48.2982078867416,8.42623628582414,0.846694330895531,0,4.21195767170188,0,0.626719583092093,7.51903431270201,14.0512175575331,4.65705417800729,0.403599414382095,0,0,1.53620382154229,1.56573275524691,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.858743477033,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.884367176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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=445347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-53bp_to_uc003tgd.1_5end | |||
|description=CAGE_peak_5_at_TARP_5end | |||
|id=chr7:38315972..38316007,- | |||
|ontology_enrichment_celltype=CL:0000763!4.20e-34!112;CL:0000049!4.20e-34!112;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002057!7.20e-27!42;CL:0002032!1.41e-25!165;CL:0000837!1.41e-25!165;CL:0000988!5.30e-25!182;CL:0000860!1.47e-24!45;CL:0002194!7.00e-23!63;CL:0000576!7.00e-23!63;CL:0000040!7.00e-23!63;CL:0000559!7.00e-23!63;CL:0000557!1.56e-22!71;CL:0002009!6.51e-22!65;CL:0000766!7.68e-22!76;CL:0000839!3.16e-21!70;CL:0000738!2.07e-16!140;CL:0002087!1.28e-15!119;CL:0002031!1.27e-13!124;CL:0000623!1.88e-07!3;CL:0000825!1.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-45;33!CL:0002057;1.23e-45;33!CL:0000473;2.84e-31;39!CL:0000234;2.84e-31;39!CL:0000576;9.87e-25;48!CL:0000763;1.81e-16;100!CL:0000766;2.58e-14;69!CL:0002087;8.64e-09;104!CL:0000623;3.13e-08;3!CL:0002032;6.75e-07;1!CL:0000557;6.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.73e-41,108;CL:0000049,6.73e-41,108;CL:0000860,2.21e-39,42;CL:0002057,2.21e-39,42;CL:0000473,5.70e-34,48;CL:0000234,5.70e-34,48;CL:0002194,6.16e-33,59;CL:0000576,6.16e-33,59;CL:0000040,6.16e-33,59;CL:0000559,6.16e-33,59;CL:0002032,8.41e-32,161;CL:0000837,8.41e-32,161;CL:0002009,9.82e-32,61;CL:0000557,1.01e-31,67;CL:0000037,3.13e-30,168;CL:0000839,4.83e-29,66;CL:0000988,2.17e-28,177;CL:0000766,2.68e-26,72;CL:0002087,1.95e-20,115;CL:0002031,2.17e-19,120;CL:0000738,2.86e-18,136;CL:0000134,4.28e-11,354;CL:0002320,9.33e-11,361;CL:0000219,1.46e-09,386;CL:0000034,2.03e-08,441;CL:0000623,3.50e-08,3;CL:0000825,3.50e-08,3;CL:0000048,4.25e-08,427;CL:0000723,6.77e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.57e-27;42!CL:0000049;3.18e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!4.44e-15!31;DOID:1240!1.15e-12!39;DOID:2531!1.32e-08!51;DOID:0060083!1.32e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.14e-16;31!DOID:1240;1.29e-11;39!DOID:2531;5.83e-08;51!DOID:0060083;5.83e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.75e-17,31;DOID:1240,1.31e-15,39;DOID:2531,1.93e-11,51;DOID:0060083,1.93e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!9.19e-25!112;UBERON:0002371!2.20e-20!80;UBERON:0001474!2.61e-18!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!2.86e-15!101;UBERON:0001434!2.86e-15!101;UBERON:0003081!1.84e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-27,76;UBERON:0002390,2.91e-27,98;UBERON:0003061,2.91e-27,98;UBERON:0001474,3.61e-25,82;UBERON:0002193,2.70e-24,108;UBERON:0002405,5.75e-24,93;UBERON:0004765,1.48e-22,90;UBERON:0001434,7.11e-20,100;UBERON:0003081,1.27e-10,203;UBERON:0002384,2.71e-10,371;UBERON:0002204,3.68e-10,167 | |||
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|short_description=p5@TARP | |||
}} |
Revision as of 01:08, 14 September 2013
Short description: | p5@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TARP_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_uc003tgd.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.73e-41 | 108 |
common myeloid progenitor | 6.73e-41 | 108 |
classical monocyte | 2.21e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-39 | 42 |
defensive cell | 5.70e-34 | 48 |
phagocyte | 5.70e-34 | 48 |
monopoietic cell | 6.16e-33 | 59 |
monocyte | 6.16e-33 | 59 |
monoblast | 6.16e-33 | 59 |
promonocyte | 6.16e-33 | 59 |
hematopoietic oligopotent progenitor cell | 8.41e-32 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-32 | 161 |
macrophage dendritic cell progenitor | 9.82e-32 | 61 |
granulocyte monocyte progenitor cell | 1.01e-31 | 67 |
hematopoietic stem cell | 3.13e-30 | 168 |
myeloid lineage restricted progenitor cell | 4.83e-29 | 66 |
hematopoietic cell | 2.17e-28 | 177 |
myeloid leukocyte | 2.68e-26 | 72 |
nongranular leukocyte | 1.95e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 2.17e-19 | 120 |
leukocyte | 2.86e-18 | 136 |
mesenchymal cell | 4.28e-11 | 354 |
connective tissue cell | 9.33e-11 | 361 |
motile cell | 1.46e-09 | 386 |
stem cell | 2.03e-08 | 441 |
natural killer cell | 3.50e-08 | 3 |
pro-NK cell | 3.50e-08 | 3 |
multi fate stem cell | 4.25e-08 | 427 |
somatic stem cell | 6.77e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.75e-27 | 76 |
hematopoietic system | 2.91e-27 | 98 |
blood island | 2.91e-27 | 98 |
bone element | 3.61e-25 | 82 |
hemolymphoid system | 2.70e-24 | 108 |
immune system | 5.75e-24 | 93 |
skeletal element | 1.48e-22 | 90 |
skeletal system | 7.11e-20 | 100 |
lateral plate mesoderm | 1.27e-10 | 203 |
connective tissue | 2.71e-10 | 371 |
musculoskeletal system | 3.68e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.75e-17 | 31 |
leukemia | 1.31e-15 | 39 |
hematologic cancer | 1.93e-11 | 51 |
immune system cancer | 1.93e-11 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.