FFCP PHASE1:Hg19::chr7:44143978..44143989,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=165|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=303|TSSclassifier=S|UniProt=Q8IUX7|association_with_transcript=18bp_to_ENST00000223357,NM_001129,uc003tkb.2_5end|coexpression_cluster_id=C1997|description=CAGE_peak_2_at_AEBP1_5end|id=chr7:44143978..44143989,+|ontology_enrichment_celltype=CL:0000055!7.32e-23!180;CL:0000057!1.21e-16!75;CL:0000183!9.56e-10!59;CL:0000187!2.20e-08!54;CL:0000680!3.97e-08!57;CL:0000056!3.97e-08!57;CL:0000355!3.97e-08!57;CL:0000192!4.29e-08!42;CL:0000514!4.29e-08!42;CL:0000359!1.69e-07!32;CL:0002620!2.63e-07!23|ontology_enrichment_celltype_v019=CL:0002620;5.20e-08;23!CL:0000057;5.62e-08;73!CL:0000359;2.64e-07;32|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-19,76;CL:0000187,3.90e-08,55;CL:0002620,4.16e-08,23;CL:0000192,1.36e-07,43;CL:0000514,1.36e-07,43;CL:0000680,1.61e-07,58;CL:0000056,1.61e-07,58;CL:0000355,1.61e-07,58;CL:0000359,3.05e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.43e-16!365;UBERON:0007023!1.45e-14!115;UBERON:0000914!1.52e-12!83;UBERON:0002329!1.52e-12!83;UBERON:0003077!1.52e-12!83;UBERON:0003059!1.52e-12!83;UBERON:0007282!1.52e-12!83;UBERON:0009618!1.52e-12!83;UBERON:0007285!1.52e-12!83;UBERON:0000119!1.57e-11!312;UBERON:0000483!4.88e-11!309;UBERON:0000477!5.46e-11!286;UBERON:0000481!1.98e-10!347;UBERON:0004290!2.17e-10!70;UBERON:0004872!8.28e-10!84;UBERON:0002385!2.61e-09!63;UBERON:0001015!2.61e-09!63;UBERON:0000383!2.61e-09!63;UBERON:0004111!2.94e-09!241;UBERON:0001134!8.44e-09!61;UBERON:0002036!8.44e-09!61;UBERON:0003082!8.44e-09!61;UBERON:0000486!9.32e-09!82;UBERON:0000025!9.96e-09!194;UBERON:0003102!1.57e-08!95;UBERON:0005256!1.63e-08!143;UBERON:0007100!3.34e-08!27;UBERON:0003103!3.57e-08!69;UBERON:0002049!3.66e-08!79;UBERON:0007798!3.66e-08!79;UBERON:0002199!5.39e-08!45;UBERON:0002416!5.39e-08!45;UBERON:0003075!1.00e-07!86;UBERON:0007284!1.00e-07!86;UBERON:0000948!1.33e-07!24;UBERON:0005498!1.33e-07!24;UBERON:0004140!1.33e-07!24;UBERON:0009881!1.33e-07!24;UBERON:0004141!1.33e-07!24;UBERON:0003084!1.33e-07!24;UBERON:0007005!1.33e-07!24;UBERON:0004139!1.33e-07!24;UBERON:0004291!1.33e-07!24;UBERON:0001009!1.56e-07!113;UBERON:0002346!1.92e-07!90;UBERON:0004535!4.91e-07!110;UBERON:0001981!5.38e-07!60;UBERON:0007500!5.38e-07!60;UBERON:0004537!5.38e-07!60;UBERON:0006965!5.38e-07!60;UBERON:0002097!8.14e-07!40;UBERON:0000468!8.64e-07!659|ontology_enrichment_uberon_v019=UBERON:0007100;9.25e-09;25!UBERON:0000948;3.78e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-14,114;UBERON:0010314,2.23e-11,132;UBERON:0007524,1.03e-10,73;UBERON:0003077,3.11e-10,72;UBERON:0007285,3.11e-10,72;UBERON:0002329,5.99e-10,71;UBERON:0003059,5.99e-10,71;UBERON:0007282,5.99e-10,71;UBERON:0004290,5.99e-10,71;UBERON:0009618,5.99e-10,71;UBERON:0007503,9.52e-10,78;UBERON:0007100,5.86e-09,27;UBERON:0002385,8.91e-09,64;UBERON:0001015,8.91e-09,64;UBERON:0000383,8.91e-09,64;UBERON:0002199,9.47e-09,46;UBERON:0002416,9.47e-09,46;UBERON:0000948,2.72e-08,24;UBERON:0005498,2.72e-08,24;UBERON:0004140,2.72e-08,24;UBERON:0009881,2.72e-08,24;UBERON:0004141,2.72e-08,24;UBERON:0003084,2.72e-08,24;UBERON:0007005,2.72e-08,24;UBERON:0004139,2.72e-08,24;UBERON:0004291,2.72e-08,24;UBERON:0000486,2.99e-08,83;UBERON:0001134,3.07e-08,62;UBERON:0002036,3.07e-08,62;UBERON:0003082,3.07e-08,62;UBERON:0000119,3.82e-08,309;UBERON:0004872,5.54e-08,83;UBERON:0003104,5.72e-08,160;UBERON:0009142,5.72e-08,160;UBERON:0003103,7.11e-08,68;UBERON:0003102,7.78e-08,99;UBERON:0000483,1.04e-07,306;UBERON:0002097,1.92e-07,41;UBERON:0000479,8.38e-07,773|phase1_expression=9.08391896352783,10.4909256706582,5.3562673556469,6.00439790118782,28.1585489489191,5.23403114460221,2.53299878168311,5.68547886084148,7.57438321779532,0,0,0,0.527533956456907,3.34169152992126,4.63956326019082,4.70627602516243,2.41077811209591,4.38186054232424,4.87932798790507,2.21617904538218,3.67201244239655,5.32873026512749,0,0.958120975510189,1.00434111675842,0.0764134057479513,0,0,0,0,0,0,2.10844143144775,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,17.0664806419773,2.01210257911091,4.73091478821062,10.1202962667679,12.5334477658972,5.06962816362883,66.8040195522923,126.038431408383,0.945348171640679,1.55210578223795,1.93236528524877,8.44815036960246,0.364295288292542,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0.39752481473341,2.58070378531837,1.04142150482278,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=303 | |||
|TSSclassifier=S | |||
|UniProt=Q8IUX7 | |||
|association_with_transcript=18bp_to_ENST00000223357,NM_001129,uc003tkb.2_5end | |||
|coexpression_cluster_id=C1997 | |||
|description=CAGE_peak_2_at_AEBP1_5end | |||
|id=chr7:44143978..44143989,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.32e-23!180;CL:0000057!1.21e-16!75;CL:0000183!9.56e-10!59;CL:0000187!2.20e-08!54;CL:0000680!3.97e-08!57;CL:0000056!3.97e-08!57;CL:0000355!3.97e-08!57;CL:0000192!4.29e-08!42;CL:0000514!4.29e-08!42;CL:0000359!1.69e-07!32;CL:0002620!2.63e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.20e-08;23!CL:0000057;5.62e-08;73!CL:0000359;2.64e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-19,76;CL:0000187,3.90e-08,55;CL:0002620,4.16e-08,23;CL:0000192,1.36e-07,43;CL:0000514,1.36e-07,43;CL:0000680,1.61e-07,58;CL:0000056,1.61e-07,58;CL:0000355,1.61e-07,58;CL:0000359,3.05e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.43e-16!365;UBERON:0007023!1.45e-14!115;UBERON:0000914!1.52e-12!83;UBERON:0002329!1.52e-12!83;UBERON:0003077!1.52e-12!83;UBERON:0003059!1.52e-12!83;UBERON:0007282!1.52e-12!83;UBERON:0009618!1.52e-12!83;UBERON:0007285!1.52e-12!83;UBERON:0000119!1.57e-11!312;UBERON:0000483!4.88e-11!309;UBERON:0000477!5.46e-11!286;UBERON:0000481!1.98e-10!347;UBERON:0004290!2.17e-10!70;UBERON:0004872!8.28e-10!84;UBERON:0002385!2.61e-09!63;UBERON:0001015!2.61e-09!63;UBERON:0000383!2.61e-09!63;UBERON:0004111!2.94e-09!241;UBERON:0001134!8.44e-09!61;UBERON:0002036!8.44e-09!61;UBERON:0003082!8.44e-09!61;UBERON:0000486!9.32e-09!82;UBERON:0000025!9.96e-09!194;UBERON:0003102!1.57e-08!95;UBERON:0005256!1.63e-08!143;UBERON:0007100!3.34e-08!27;UBERON:0003103!3.57e-08!69;UBERON:0002049!3.66e-08!79;UBERON:0007798!3.66e-08!79;UBERON:0002199!5.39e-08!45;UBERON:0002416!5.39e-08!45;UBERON:0003075!1.00e-07!86;UBERON:0007284!1.00e-07!86;UBERON:0000948!1.33e-07!24;UBERON:0005498!1.33e-07!24;UBERON:0004140!1.33e-07!24;UBERON:0009881!1.33e-07!24;UBERON:0004141!1.33e-07!24;UBERON:0003084!1.33e-07!24;UBERON:0007005!1.33e-07!24;UBERON:0004139!1.33e-07!24;UBERON:0004291!1.33e-07!24;UBERON:0001009!1.56e-07!113;UBERON:0002346!1.92e-07!90;UBERON:0004535!4.91e-07!110;UBERON:0001981!5.38e-07!60;UBERON:0007500!5.38e-07!60;UBERON:0004537!5.38e-07!60;UBERON:0006965!5.38e-07!60;UBERON:0002097!8.14e-07!40;UBERON:0000468!8.64e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.25e-09;25!UBERON:0000948;3.78e-08;22 | |||
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| |||
|short_description=p2@AEBP1 | |||
}} |
Revision as of 01:18, 14 September 2013
Short description: | p2@AEBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AEBP1_5end |
Coexpression cluster: | C1997_Chondrocyte_vagina_aorta_mesodermal_heart_Fibroblast_tenocyte |
Association with transcript: | 18bp_to_ENST00000223357, NM_001129, uc003tkb.2_5end |
EntrezGene: | AEBP1 |
HGNC: | 303 |
UniProt: | Q8IUX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.78e-19 | 76 |
muscle cell | 3.90e-08 | 55 |
skin fibroblast | 4.16e-08 | 23 |
smooth muscle cell | 1.36e-07 | 43 |
smooth muscle myoblast | 1.36e-07 | 43 |
muscle precursor cell | 1.61e-07 | 58 |
myoblast | 1.61e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-07 | 58 |
vascular associated smooth muscle cell | 3.05e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.